Os01g0637100

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0637100| Description = Cyclin-like F-box domain containing protein| Version = NM_001050203.2 GI:297597262 GeneID:4326575| Length = 5356 bp|...")
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Gene Name

Os01g0637100

Description

Cyclin-like F-box domain containing protein

Version

NM_001050203.2 GI:297597262 GeneID:4326575

Length

5356 bp

Definition

Oryza sativa Japonica Group Os01g0637100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27297041..27302396

Sequence Coding Region

27297041..27297076,27297196..27297276,27298565..27298689,27300204..27300366,27301338..27302396

Expression

GEO Profiles:Os01g0637100

Genome Context

<gbrowseImage1> name=NC_008394:27297041..27302396 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27297041..27302396 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggagatttttatcaggctgccggcgaaaactcttgctcgtttcaagtctgtctgcaaggcatggcacaccatcatctctgaaccattcttcatccgcagtcatctccgccactctgccttcaagcataaacaggagccctccttttttgtcattttgcatgcgctggacaatgtggttgaaattactttctcgaataatgtccccgtcttccggtggaaggatggccagggcaatgcatgccttgtgcatgcaatggatttccatggtgagtatcagataatcaataaaatgtctcactgtgatggcctggtgttattcccaactgacaccaagttgtatgtgatcaacctgaccacaagtgatgttcttaggttgcctgacaaccaagagtctgatacgctgaggcaggcaactgggctgggtcttgaccctcgcaccaacatgtacaaggttgctcgatacttctaccgttctgtagaccatactattgggacttatgatgcagctatggaagtgttctcaattggtcaggatgccttctggagggagacatcagaggttccaccatacccagttcgctctatggaaagtcccattcactccaagggatatcttttttggaatatcgatgagaggttcctcaaaggacaatcacgtggtttcctttgcttcagcttagaagatgaaacatttagtcttatcccccatccctgcccatatttgccattgaaccatggaacatcactcgtatcagagctagacggggagttatgcgtaggtttattcatatcaggtcaacaacagttatggatgtacaatggcaatcagtgggatcagcgcttcagcattaacgtacccgggccaaatgacttgtacattccattagatattcttcctcatgatcaattacttcttcaaaggggtccacatctgtaccaccacaaccaccagtcaagtgaagacataaaagaagtggcacgcatggatcaactcaactaccagagtcccccgggagaaccctacgtctacatggtgattccctacatggaaagccttgatgggaaggtattgcctaatggacctgttgtgatttcacctgatgtttatttccttcattgtaccaggaaggtagcatcatctctccaatatttgcatattcttgatgacgacatcctccactattacccgctggcaaagacgccaaagtcgggcggcgaccggcatgcactcctcccttctgattacaatccattttattctggatttgtcaacagagatacagataagcttagttacaaaaagatgggaattccaaaagggaaaatctttatcatcaacccgaaggcttgtagctgcaactcctctgtgattagattactctggttcatggaagcaacaggcaacccaaaactgtcaaattacgctatggattgggtgttcgacaggagggcgaggctatag</cdnaseq>

Protein Sequence

<aaseq>MEIFIRLPAKTLARFKSVCKAWHTIISEPFFIRSHLRHSAFKHK QEPSFFVILHALDNVVEITFSNNVPVFRWKDGQGNACLVHAMDFHGEYQIINKMSHCD GLVLFPTDTKLYVINLTTSDVLRLPDNQESDTLRQATGLGLDPRTNMYKVARYFYRSV DHTIGTYDAAMEVFSIGQDAFWRETSEVPPYPVRSMESPIHSKGYLFWNIDERFLKGQ SRGFLCFSLEDETFSLIPHPCPYLPLNHGTSLVSELDGELCVGLFISGQQQLWMYNGN QWDQRFSINVPGPNDLYIPLDILPHDQLLLQRGPHLYHHNHQSSEDIKEVARMDQLNY QSPPGEPYVYMVIPYMESLDGKVLPNGPVVISPDVYFLHCTRKVASSLQYLHILDDDI LHYYPLAKTPKSGGDRHALLPSDYNPFYSGFVNRDTDKLSYKKMGIPKGKIFIINPKA CSCNSSVIRLLWFMEATGNPKLSNYAMDWVFDRRARL</aaseq>

Gene Sequence

<dnaseqindica>5321..5356#5121..5201#3708..3832#2031..2193#1..1059#atggagatttttatcaggctgccggcgaaaactcttgctcgtttcaagtctgtctgcaaggcatggcacaccatcatctctgaaccattcttcatccgcagtcatctccgccactctgccttcaagcataaacaggagccctccttttttgtcattttgcatgcgctggacaatgtggttgaaattactttctcgaataatgtccccgtcttccggtggaaggatggccagggcaatgcatgccttgtgcatgcaatggatttccatggtgagtatcagataatcaataaaatgtctcactgtgatggcctggtgttattcccaactgacaccaagttgtatgtgatcaacctgaccacaagtgatgttcttaggttgcctgacaaccaagagtctgatacgctgaggcaggcaactgggctgggtcttgaccctcgcaccaacatgtacaaggttgctcgatacttctaccgttctgtagaccatactattgggacttatgatgcagctatggaagtgttctcaattggtcaggatgccttctggagggagacatcagaggttccaccatacccagttcgctctatggaaagtcccattcactccaagggatatcttttttggaatatcgatgagaggttcctcaaaggacaatcacgtggtttcctttgcttcagcttagaagatgaaacatttagtcttatcccccatccctgcccatatttgccattgaaccatggaacatcactcgtatcagagctagacggggagttatgcgtaggtttattcatatcaggtcaacaacagttatggatgtacaatggcaatcagtgggatcagcgcttcagcattaacgtacccgggccaaatgacttgtacattccattagatattcttcctcatgatcaattacttcttcaaaggggtccacatctgtaccaccacaaccaccagtcaagtgaagacataaaagaagtggcacgcatggatcaactcaactaccagagtcccccgggagaaccctacgtctacatggtgattccctacatggaaagccttgtccgagttacatgtaacatgtagaggagctgatataacataatcatgtaataatatatttggctctgctcaattttgtttgagatatatgaaatcatcatatttatttgtttgttttttatttgttatctcatgaacaaagttgagtttacttttaaaatttttcatggtggtacaatatcatttcttgtaagttctttttaatttacttagtacccctttgatatggaggattgtcatagaaattttgaggatgtaatttttttaaaggaaaatttcctatggagtctgttgattcataggaaagataggacatttttcgtagggttgtattgttatagttaaattttataggaaaataagcaagagggtctaacctcttggaaactttcctttgctttgttaatttcctatgatgctatcaaagggtttctcttcatcttttgtacgttttccattcccgtaggacaagagaaatatgctaattcaatccctacgtctttttttctatcttgcgtttcaaaggggtccttaattggttcccttgtaaatttgttttctgttcattcgtattgctttacaatgacttttcgagtagggtaaactgttttgacagttcagaactggaaggtccacttgtagctgtcagagttacgtggaaccttgtgcttattggacaatgaacactgtataattatccaaaactaggaaaacggatatcaactattattcctcagtgctataattcaggcatacctgactaaaaactttctattcaacctaaaacaggtaaaatgtagcatttgtccatttgatggtcaaatcctatgttggtaaaatatagcatttgtccatttgattttttttcctaccattagtgatctaatcatatcttcaccagaactataatagtaattttaattctatgttggtatgtacataaacttggttatcccttggcaactttgcaggatgggaaggtattgcctaatggacctgttgtgatttcacctgatgtttatttccttcattgtaccaggaaggtagcatcatctctccaatatttgcatattcttgatgacgacatcctccactattacccgctggcaaagacgccaaagtcgggcggcgaccgtgtgagcctctgaataatcccaccttgcttagcttgggaggaggaagccattttaaaaggaagagccacccttcccctattggactagtcttttagggagattgggcctttccctaagtgggtgtgccaaagaactgttggggtccggacaaccttaagttattgggcctcggccaaccccacctgggccggattgttatcatttggtatcagagctgggcccctgttaagggagtgggaatgatgaggacatcctccactattacccgctggtaagttattgggcatcggccaaccccacctgggccggattgttatcatttggtatcagagctgtgccgttgttaagggggtgggaatgatgaggatatcctccactattacctgctggcaaagacgctaaagtcaggcggcgaccgtgtgagcctctgaataatcccaccttgcttagcttgggaggaggaagctatcttaaaaggaagagccacccttctcctattgcttgcttagcttgagaggaggaagccatcttaaaaggaagagccacccttctcctattggactagtcttttagggagattgggtctttccctgagtgggtgtgccaaagaactgttggggtccgggcaaccttaagttattgagcatcggccaaccccacctgggccggattgttatcatttcttctattatgacttgctgaataatgattagcaatctggtttcactgaactactaggatggtctgtataattggcaaccttaagttattgggcctcggccaaccccacctgggtcggattgttatcatttcttctattatgacttgttgaataatgattagcaatctggtttcactgaactactaggatggtctgtataattcaggctcagcttcgacaaagaaaagtagctaacagtgatcaacaatactgttacttttgtgtactgtaataaaattgttgtttagcatgttgtaatgtttcctttgttcttctcagttatacgaagagcaccacatgagtttaagattgcatgtatggaggtaattctctttaggcagttgtcttatgaggatcgggtttaatactcaatgtgctatgatactatgaaatattatgtgccagtaaaacaagctaattttatttgttagaataagaactatgaggtcttgtttgtatgtgccttttggtttcaattccttagtgaacttaaaccgaacaagtccctaataaattatccctcatccgcataccatccctcctatggttaagaagtttgcttattagcttctccatttttaattcttgtatggcatcataactcatatccttcagaaatcactataagacttgcaagaattaagaaaagttgttattgtctcgaaattcctttctaacgggtacatgacaatcttagaaacacacattatttagattcttcgagagacctgaaactccatgttggtatcacagcaggttcttgaaattctttaatttttgttcttcggcagggcatgcactcctcccttctgattacaatccattttattctggatttgtcaacagagatacagataagcttagttacaaaaagatgggaattccaaaagggaaaatctttatcatcaacccgaaggtatgtctattacaccagttaaaaagttagtgatcccatgcttgtattgcctttttatagtcatcctgtgtgcgtgaagggggggagtagccataaacagttctgttgaactcctatacctccttacatacccttatccatgatatgttccctccaaacactcttgttgtgcaggttagcttgtcattcttcccttcttgcagtacgtactttttaagtaatgcatgaaaggtcttctctgccgtagcaattactatggccgacgatcaacgtcgtcccaaaataagtgcccctttcgaattcaaaatttcttcccatcttacctctaatcaccctcccactgccaaacgcacatcatttaataatgggcactatattgttttgttcttaaaccttaatctctaccaaacaatctaaaaggggcacttattttgggatgaagtatttactagctatgtgtgtgaacttgctgtccagaatcccaggcaccaatattttttcttgcaaaattgatgtcagttgatctgatgtggatgcatactgcatagttacagaaaggttaccaagttaagtaaccgtgttttctgcacatggataaaaggccacagagaatatatatatgttatgtgtgcaaacttttcatgagattagctagaccgaaaaacatgcacattcatgttttctttttctttggttctttcatactatcctggacaaactatttttatccttagtgcatagtcaactccagttctatgctgcctgagccatacaggttactgctgggagcaaagggcagctagtgtgattgtgttgtactcatggatggtcggactccataacatgtaaatttctttttgtgctgaactgctgatcatcaatgatgacgccatgcaggaagactacaattcctggaattactggaagatgccatctccaaatgttgatctgtagtgtagttttaacaaacacagaagtagataccactagattctgcatcagcataacagtcaagttcgtgtacacaaattatcatcgctacgtcggggttctgtccaatctgtaaagcatctcaggagtttccatatttatggttttgatttgatctccaatgcaaaggttgtcattttttttttttttgcttcgacgaagctctcctgatcatacatcttttagggagtgatctgttatactcttcgttgaacttaggccttagcttgttagctttccaagttgtatcagcagctgctagccagcaattttttttttcctttatgtgttcttgtaggcttgtagctgcaactcctctgtgattagattactctggttcatggaagcaacaggcaacccaaaactgtcaaattacgctgtatgttgtacgagagagaacatcgtacatttcctgccccattttcactttcttgtgctgtatgtaaccttcaatgcctgtagctggtaaacgtttcatgtgctctgttatgcacgtagatggattgggtgttcgacaggagggcgaggctatag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0637100, RefSeq:Os01g0637100