Os01g0639100

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0639100| Description = Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)| Version = NM_001050208.1 GI:115438786 GeneID:43265...")
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Gene Name

Os01g0639100

Description

Similar to Eukaryotic initiation factor 4A-3 (eIF4A-3) (eIF-4A-3)

Version

NM_001050208.1 GI:115438786 GeneID:4326580

Length

3480 bp

Definition

Oryza sativa Japonica Group Os01g0639100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27392841..27396320

Sequence Coding Region

27392866..27393161,27393446..27393686,27393767..27393847,27394247..27394354,27394467..27394586
,27394944..27395108,27395199..27395288,27395940..27396053

Expression

GEO Profiles:Os01g0639100

Genome Context

<gbrowseImage1> name=NC_008394:27392841..27396320 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27392841..27396320 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggcggccaccacgtcgcggcgcggcccgggcgccatggacgacgagaacctcaccttcgagacctccccgggggtcgaggtcatcagcagcttcgaccagatggggatccgcgacgacctcctccgcggcatctacgcctacggcttcgagaagccctccgccatccagcagcgcgccgtcctccccatcatcagcggccgcgacgtcatcgcccaggcccagtccgggaccggcaagacctccatgatctcgctctccgtctgccagatcgtagacaccgccgtccgtgaggtgcaggctttaatactgtcaccaactagagaacttgctgcacaaacagaaagagttatgctggctatcggtgacttcatcaatatccaagtgcatgcttgtattggtggcaaaagtattggtgaggatattagaaagcttgagcacggagtgcatgtggtgtcaggaacacctggcagagtctgtgatatgatcaagagaaggaccttgcgtacaagagccattaagctcctaattctggatgaagctgatgagatgttgggcagaggctttaaggatcagatatatgatgtgtacagatacctccctccagaactccaggtttgcttgatctccgcaactctgcctcacgagatcttggaaatgaccagcaagttcatgactgatccagttcggatccttgtgaagcgtgatgaattgactctagagggcatcaaacaattctttgttgctgttgagaaagaagaatggaagtttgacacgctttgtgatctttatgatacactgacaatcacccaagctgtcattttctgcaacacaaagagaaaggttgattggcttacggaaagaatgcgcagcaataacttcacagtatcagctatgcatggcgacatgcctcaaaaggaaagggatgccattatgggtgaattcaggtctggtgcaacccgtgttctaatcacgacagatgtgtgggctcgaggcctcgatgttcagcaggtctctcttgtcataaattatgatctcccaaataatcgtgaactttacatccatcgcattggtcgctctggacgttttggtcgcaagggtgtggccatcaattttgtcaaaaaggaagacatccgtatcctgagagatatcgagcagtactacagcacgcagattgatgaaatgccaatgaatgttgctgatctaatttga</cdnaseq>

Protein Sequence

<aaseq>MAAATTSRRGPGAMDDENLTFETSPGVEVISSFDQMGIRDDLLR GIYAYGFEKPSAIQQRAVLPIISGRDVIAQAQSGTGKTSMISLSVCQIVDTAVREVQA LILSPTRELAAQTERVMLAIGDFINIQVHACIGGKSIGEDIRKLEHGVHVVSGTPGRV CDMIKRRTLRTRAIKLLILDEADEMLGRGFKDQIYDVYRYLPPELQVCLISATLPHEI LEMTSKFMTDPVRILVKRDELTLEGIKQFFVAVEKEEWKFDTLCDLYDTLTITQAVIF CNTKRKVDWLTERMRSNNFTVSAMHGDMPQKERDAIMGEFRSGATRVLITTDVWARGL DVQQVSLVINYDLPNNRELYIHRIGRSGRFGRKGVAINFVKKEDIRILRDIEQYYSTQ IDEMPMNVADLI</aaseq>

Gene Sequence

<dnaseqindica>26..321#606..846#927..1007#1407..1514#1627..1746#2104..2268#2359..2448#3100..3213#tctttctagggtttcgtctcccccaatggcggcggccaccacgtcgcggcgcggcccgggcgccatggacgacgagaacctcaccttcgagacctccccgggggtcgaggtcatcagcagcttcgaccagatggggatccgcgacgacctcctccgcggcatctacgcctacggcttcgagaagccctccgccatccagcagcgcgccgtcctccccatcatcagcggccgcgacgtcatcgcccaggcccagtccgggaccggcaagacctccatgatctcgctctccgtctgccagatcgtagacaccgccgtccgtgagtacgcctcttacccaccaatctgacattttacttcagtatttccactttttccccctactgtgcgatctattttgctctagattaacttgcattgcagcatcgtgctagtactgtgcgatctattttactagggtttagcataatgttataggtgatggcttccaaatttattagagctgtactgctgtacacaaattctttccatgcctgttttggtgctgattattgttcactgttgttgtctatgttcccgtaatcctaatattgtttctcattatgtagggtgcaggctttaatactgtcaccaactagagaacttgctgcacaaacagaaagagttatgctggctatcggtgacttcatcaatatccaagtgcatgcttgtattggtggcaaaagtattggtgaggatattagaaagcttgagcacggagtgcatgtggtgtcaggaacacctggcagagtctgtgatatgatcaagagaaggaccttgcgtacaagagccattaagctcctaattctggttggtttacttttcatgttgtttttgaaaccacctttggtttgatcaaatggtatgagaataacattcttccatgacaggatgaagctgatgagatgttgggcagaggctttaaggatcagatatatgatgtgtacagatacctccctccagaactccaggtcaatctcatattaaacctgtcataaacttatagtttgtcttgtgtttcagtgttctatcagctagttgattattttaataagaattcagctcctgaagtgtattgtaatctatttttcatctctggtgcatttttccttgcactgttccatccatgttttgatccttgtaacatatcatcataccaacagactagctatcttgtctctgtttggattcagtaatgcatgctttattatatgctgatatgcatatgcagatttgcttattgtaatgccacctctggcttcacatgagcgcaatgcatgaacttgatgacaataaatgatggcaatcttgggcagtgaggtcccgaatcccaatgctaatgtgcaagcatatcttttttgtctgcacaggtttgcttgatctccgcaactctgcctcacgagatcttggaaatgaccagcaagttcatgactgatccagttcggatccttgtgaagcgtgatgaattgactctagaggtaaatatcatcacttgtttttcttatcagtttgatgatcttcaatatgtattttactttgttggttctattgatctttaaatatattcgtctttccatatcatgtttgtagggcatcaaacaattctttgttgctgttgagaaagaagaatggaagtttgacacgctttgtgatctttatgatacactgacaatcacccaagctgtcattttctgcaacacaaagagaaaggtgatatatagttttcttttttgttatggtcgtttcactggtactctattattgttttataaagtctgctccctctgttatttgtctacaccaaattattttgctatcctatggtcatagcttctttgtagctttttcaaacacctcttttttgtgccatctaggcagtgggcattactccttgtccttgtctttctgaacttgttgattatggttagaatacttgttcatgcaagcacatgagttgatattttctgtttgctatttccttactatgttgaattgcaatgttttctaactatgctgacttgtcattactgatgttttgctcgatatcctggggtttactttggtcaggttgattggcttacggaaagaatgcgcagcaataacttcacagtatcagctatgcatggcgacatgcctcaaaaggaaagggatgccattatgggtgaattcaggtctggtgcaacccgtgttctaatcacgacagatgtgtgggctcgaggcctcgatgttcagcaggcaagtttattgtaatgttttgtttgaagactattgattttatcgtgtgtggagtactgattaagtgattattatttcatttattttcaggtctctcttgtcataaattatgatctcccaaataatcgtgaactttacatccatcgcattggtcgctctggacgttttggtcgcaaggtaatactgcacaacttgcaactctttattctaactaaatctatcctctactttgtttgcgagttattcataacaagggaattttggttcaagttttgttggtactaacacatgtaccatggttttgctcaacacaattgcacattcgccaataatcatgttgataataatgaatcaaatgcttgcacattttgttttggcagtatatgacaaatcagagaacaagaattctgatttcatactgttcacacagaatgaaatattgaggagccgctacacttttttttttttgctaaagaatggcacgtggttaaaaaattgttggcctatgacatgtgatgcattatgttagtgttttgtggcaagccaatcgtgtgataacaagccaaacactaggctaagttggtaaacctccttaccaaagatgtggtaaagtgtggctaccaaccaaacacctgtgtactccagtaaaccgaacagctgaccacatttatctagattctagaaacaactaaacaatatttactctgaattccaaatgttccgtgagattgaggaaaatgatttcgagacagatccatgtcctggcattagaaatcatttgattgggctgatgctaaagaccaaaaacattttccttgcatgatgtagggtgtggccatcaattttgtcaaaaaggaagacatccgtatcctgagagatatcgagcagtactacagcacgcagattgatgaaatgccaatgaatgttgctgatctaatttgagtgctggagtggcgctaccatgtttgatcatctggtctggcaacaactgagcttgtttgttgtgattttggttgacatgctttgccgtgactgtattgctatggactttaaagggttgcgagtctaatactagtgattggtttcgttcccctctcttgtgacatgatctgtatataattttagtgccagctcatgtaacactatgattgcatttctgctcagaacatgagacttgttcgttatatttattgccacaaggatttgatg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0639100, RefSeq:Os01g0639100