Os01g0641000

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Revision as of 04:50, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0641000| Description = Similar to Protein kinase| Version = NM_001050217.1 GI:115438804 GeneID:4326554| Length = 4393 bp| Definition = Ory...")
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Gene Name

Os01g0641000

Description

Similar to Protein kinase

Version

NM_001050217.1 GI:115438804 GeneID:4326554

Length

4393 bp

Definition

Oryza sativa Japonica Group Os01g0641000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27513641..27518033

Sequence Coding Region

27513888..27514215,27515639..27515760,27516482..27516678,27516779..27516953,27517264..27517398
,27517512..27517721

Expression

GEO Profiles:Os01g0641000

Genome Context

<gbrowseImage1> name=NC_008394:27513641..27518033 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27513641..27518033 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaggcatcccggcgcgggcggcgggagcggggacgccgggttcgtccgggcggaccagatcgacctcaagagcctcgacgagcagctggagcgccacctcggccgccccgcggagcgggccgcgtcgcagcacgggggcagcgggagccgccgcggcgagtccgccaggctcgggctcggggaggagccgccgcaggcgccgcaccatcagcggcgccgggaggactgggagatcgaccccgccaagctcgtcatcagaggcgtcatcgcccgcggcacgttcggcaccgtccaccgcggcgtctacgacggccaggacgtcgctgtcaaaatgcttgactggggggaggatggccatagatcagaacgagaaatttcttcactaagagcagcatttgcacaagaggtcgctgtctggcataagcttgatcatccaaatgttaccaagtttattggggctataatgggtgcaagagatttaaatatacagacagaacatggacattttggcatgccaagtaatatttgctgcgttgttgtcgagtaccttgccggaggtgcactgaaaaattttctgataaagaacaggagaaggaagctagcctataaagttgtggtccaattggctcttgaccttgctaggggattaagctatcttcactcaaagaagatagttcatcgtgatgtgaagactgaaaatatgctccttgacaaatcaagaacagtgaaaatcgctgattttggtgttgcacgaattgaggcttcaaatcctagtgatatgacgggtgaaacaggcacacttggttacatggcacccgaggttctcaacggccatccttacaacaggaagtgtgatgtatatagctttggaatctgcctatgggagatatactgctgcgatatgccgtatcctgatctgagtttctcagaggtcacttcagctgttgttcgtcagaacttgaggcctgagataccgcgctgctgccctagctccttggccaacgtgatgaagcgctgctgggacgcgaacccggacaagcggccggcgatggcggaggtggtgtccatgctggaggcgatcgacacgtccaagggcggtggcatgatcccgaccgaccagccacagggatgcttctcgtgcttcggtcggcaccgaggcccctga</cdnaseq>

Protein Sequence

<aaseq>MRHPGAGGGSGDAGFVRADQIDLKSLDEQLERHLGRPAERAASQ HGGSGSRRGESARLGLGEEPPQAPHHQRRREDWEIDPAKLVIRGVIARGTFGTVHRGV YDGQDVAVKMLDWGEDGHRSEREISSLRAAFAQEVAVWHKLDHPNVTKFIGAIMGARD LNIQTEHGHFGMPSNICCVVVEYLAGGALKNFLIKNRRRKLAYKVVVQLALDLARGLS YLHSKKIVHRDVKTENMLLDKSRTVKIADFGVARIEASNPSDMTGETGTLGYMAPEVL NGHPYNRKCDVYSFGICLWEIYCCDMPYPDLSFSEVTSAVVRQNLRPEIPRCCPSSLA NVMKRCWDANPDKRPAMAEVVSMLEAIDTSKGGGMIPTDQPQGCFSCFGRHRGP</aaseq>

Gene Sequence

<dnaseqindica>248..575#1999..2120#2842..3038#3139..3313#3624..3758#3872..4081#acaccccaatgcgctctcacatggagtcgtcgtcgtctccccaaacacgacgacctcgaaccgcctccgtccccgcctcgccaacccgtccccttcccctgtagccaccgcgaccaccaccaccaccacgccgcggcatccacaacgccaccagagtacagagacgttccacccaccccgggccaccgaacccaacccccccagctcgctcgatcgatcgctagctccgacgacaggtttgagcgcgatgaggcatcccggcgcgggcggcgggagcggggacgccgggttcgtccgggcggaccagatcgacctcaagagcctcgacgagcagctggagcgccacctcggccgccccgcggagcgggccgcgtcgcagcacgggggcagcgggagccgccgcggcgagtccgccaggctcgggctcggggaggagccgccgcaggcgccgcaccatcagcggcgccgggaggactgggagatcgaccccgccaagctcgtcatcagaggcgtcatcgcccgcggcacgttcggcaccgtccaccgcggcgtctacgacggccaggacgtcgctggtatttttttttctttcgcccctctgctataaacagctgattgctttgcagatatattcgtccactcggcgctgaccaagttttttttgctgtccatgaccatgagctattcgatgaaatggcctgttgcttactagtactcgttagtggcttcttctgcctgcgttagcttctggttccgatcgattcctctccaagtttttaggaaagtttgatgcgtgatttaattattttcatcggtatgttcttcttcctggattaggatatggattatggagtagagccgatcgattgatagatggcaaacgtcatttaccataggtgcggttgtttcgggtgcttttggaagttgttttcgctcgtcgtgtcattagtgcttttccttgtcagcaaattgctaaaggtgatacctctgcttttcttgattccatggtgtattccgtgacttctgggtagataagcgtgcttttggcgtgcaacccttctcatgtgattgaaccaaccaacagttaaaagttttaataggcatgattcatgtgttttgtcttatgatgagcacctggaagttgaagattacatattaaagcagcggatatttcagatcaaaaagttgcaagttgcaactaggcacagtacttttcagggaccaggaaaattcaaaagcatctgaaccaaattcgggttgataaaaggtccggattagcaattttgcactgtatcaccagctataatcacatgacagaaggcaaaagcagatgcagtggttttttctgtccagaactttatcacctattgcatgccgtcctttcaatatattggttcaccaggaaattgagtacaatgtcttgaaatggaaagtatcagttagattcataagaggtcattagaatcctaaatcacttggtgatgctcatgtaacctggtagcacaaggtagcggtggttttagtcagggttcaagtccccatcagcttcctttaaatggcagtgttcctccagcatgttcttttttttatttttcaaagtatttgctaactcactggagttttttattggcttgcctttctctaccactttagtttgtatgacaaaaccagcttcctcactgcttttgcatgaataattcatcacttgtcacattatattcccccagatagattcaaacttggcaattaacagctaattgctaaatacacttttaggaaaacagagacatgcacagttcaccaagattttgttaccctcatcaagaatgtgctattgatttacattaaaaaaagaatgtgtattgatgtagtaatatgcagcattactacttcaatataactttgtcttcgaatcaattgctaaatgcaaaaaagactttttatttctacttgtagtttcattgtcgaagtaactgatatatcttctctatcatccagtcaaaatgcttgactggggggaggatggccatagatcagaacgagaaatttcttcactaagagcagcatttgcacaagaggtcgctgtctggcataagcttgatcatccaaatgttaccaaggtaatctttgactggagaagacttttttttttcatcccttcaaatttcataggttaaatcgtttcactgataaatatatagaccaatttacattatctctggtttacagaacatttgggaaatttacatttattagccctggtttacaaaaccaatttgtattcaatattgtccggcacaaccacatgggcaaacttgttttatcatgatgtatctctggcattataatctattaaggaaaccattggttgtggtgcaataatattttcatggctagagatatcagatatgacagtaggaggactggcagtcatgttcaaactctggtgctagctatataatacacccagtatcgtgtctaaaattggattccatgttttcctcttctgtataaaatagttattaaggtgtttagccatgcactgctaaagagcattagaatcttgtataattggacaatattttttttctgataatagtagcgaaggtgcgtactcctatttgaaggtgcgtactcctatttggtatggcataattacaatggaattgattttagaacatggtgccgaatttaccaagcaataaatattagtatctgccatctacacagttcattttgagctatcaacaattatcattatttttttcattcacttggtgaacgtagttgtcttctgcttctcaactgggtcctgacaatatcttgaaatttaactgacagtttattggggctataatgggtgcaagagatttaaatatacagacagaacatggacattttggcatgccaagtaatatttgctgcgttgttgtcgagtaccttgccggaggtgcactgaaaaattttctgataaagaacaggagaaggaagctagcctataaagttgtggtccaattggctcttgaccttgctagggggtaagtaataatatatgtttctcttggtcctttttctggatttacatctattattccgttttaatctcagaagattttgttgtgggatttgcactgacagattaagctatcttcactcaaagaagatagttcatcgtgatgtgaagactgaaaatatgctccttgacaaatcaagaacagtgaaaatcgctgattttggtgttgcacgaattgaggcttcaaatcctagtgatatgacgggtgaaacaggcacacttggttacatggcacccgaggtattttccttcaaccatacggaaatcttatgctgatcatgtatcatttatgctgataggtctttacttataccaaactatcgaattaagaagggaaaagtgactatatgtcactgaaaatttccttgctggtatcgttcaaaaaacttattgcttggcgaatggaaaatcttaaccctgcatcccctcaatcatcttattcattgtcatgttgtgtttctgcgatcttccaaaattgcacgtaccattcttccgtaattctagtctactgttattgtccttactgtcatacgttggcatcattgtgcaggttctcaacggccatccttacaacaggaagtgtgatgtatatagctttggaatctgcctatgggagatatactgctgcgatatgccgtatcctgatctgagtttctcagaggtcacttcagctgttgttcgtcaggtaaataaaaaaaaacgccgtcctatcccgttttccccacttcacctctctgattcctgaactctgaagcactgaaaagaaaatcaccatccttgattgatgatgtactacagaacttgaggcctgagataccgcgctgctgccctagctccttggccaacgtgatgaagcgctgctgggacgcgaacccggacaagcggccggcgatggcggaggtggtgtccatgctggaggcgatcgacacgtccaagggcggtggcatgatcccgaccgaccagccacagggatgcttctcgtgcttcggtcggcaccgaggcccctgacgaacttgatctgatggcgtcactgataatttgttatcgctatatctcagtgtaatctaatcgcattcgctatggctaatttgaggagctgtgtgattgatgtaaatgccttaacggtccagcacctcagcttcatcgtcgtatgatcgctgcgaatcctaatgcttggcctatgataagatcgagcttagaagagattattgtgacagagctgccgacgaagtttacaatctcatcatatatggtcatgaagtagacccactgtactattgcagtgtaatcgacatctttgcagaatgttaataaaagaac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0641000, RefSeq:Os01g0641000