Os01g0643800

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0643800| Description = Similar to Mitogen-activated protein kinase| Version = NM_001050229.1 GI:115438828 GeneID:4326567| Length = 5341 bp|...")
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Gene Name

Os01g0643800

Description

Similar to Mitogen-activated protein kinase

Version

NM_001050229.1 GI:115438828 GeneID:4326567

Length

5341 bp

Definition

Oryza sativa Japonica Group Os01g0643800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27673482..27678822

Sequence Coding Region

27673800..27673874,27674547..27674744,27675119..27675221,27675413..27675486,27675569..27675706
,27675804..27675959,27677453..27677602,27677844..27677903,27678016..27678552
,27678653..27678667

Expression

GEO Profiles:Os01g0643800

Genome Context

<gbrowseImage1> name=NC_008394:27673482..27678822 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27673482..27678822 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggatgctaagaagggctcgggggagccggagttcttcagcgagtacggcgatgcgagccggtacgaggtcaccgaggtggtcggcaagggcagctacggcgtggtggccgccgccgtcgacactcacaccggcgggcgcgtcgccatcaagaagatcaacgacgtcttcgagcacatctccgacgccacccgcatcctccgcgagatcaagctactccgcctcctgcgccacccggacatcgtcgagatcaagcacatcatgctcccaccctcccgccgcgagtttcgcgacatttacattatcttcgaactcatggagtccgatctccaccaggtcatcaaggccaacgacgacctcacccccgagcaccaccagttcttcctctaccagctgcttcgtgggatgaagtacattcatgccgccagcgtcttccaccgggacctcaagcccaagaacattcttgccaatgctgattgcaaggtcaagatttgtgacttcggccttgctcgagtgtccttcgacgacactccgtccgcgatattctggacggattacgtggcaacaagatggtatcgcgctccagagttgtgcggctctttcttttcaaagtacactcctgcaattgatatttggagcgtcggttgtatatttgctgaaatgcttatgggaaagccactttttcctggaaagaatgtggtacatcaattggatctcatgaccgacttacttggctctccttcaggagaaactatttccaggattcggaatgagaaagctcgacgatatttgggcaacatgagaaaaaagcctcgagtgcctttttctcagaaatttcctggtgcagacccaatggctctccatttgcttgaacggttacttgcttttgatcccaaggatcggccaactgctgcagaggccttaacagatccatactttactggattggcaaattcggaacgtgaacccatagcacaacccatctcaaaactcgagtttgagtttgagagaaggaagctagcaaaagatgatgtccgggaattaatttacagagagatattagagtaccatcctcagatgatgcagaaatatcttcgtggtggggatcagtcaaactttttgtaccccagtggggtggatcgttttaagaggcaatttgctcatctagaagaaggtgttgctcagggtgacaagactagcccgcagctaaggcagcatgtttctttaccaagggaaagagttgttaggaatggtgatgaacctgatccaactgcagattactgcataaagttgcatgtaggtgagcaaccggggcactcatcagtgacagatggactgaacaagccactcttaagtgctcgtaacttcctgaagagcgaaagcatcggtgcttcccagtgtgttgtcataaaagaaaagcgagaaaaagatgaagaatctatgtcagaatatatgaatgaagcagctgatggggtgccgcataagattgctcaattgaaaacataa</cdnaseq>

Protein Sequence

<aaseq>MDAKKGSGEPEFFSEYGDASRYEVTEVVGKGSYGVVAAAVDTHT GGRVAIKKINDVFEHISDATRILREIKLLRLLRHPDIVEIKHIMLPPSRREFRDIYII FELMESDLHQVIKANDDLTPEHHQFFLYQLLRGMKYIHAASVFHRDLKPKNILANADC KVKICDFGLARVSFDDTPSAIFWTDYVATRWYRAPELCGSFFSKYTPAIDIWSVGCIF AEMLMGKPLFPGKNVVHQLDLMTDLLGSPSGETISRIRNEKARRYLGNMRKKPRVPFS QKFPGADPMALHLLERLLAFDPKDRPTAAEALTDPYFTGLANSEREPIAQPISKLEFE FERRKLAKDDVRELIYREILEYHPQMMQKYLRGGDQSNFLYPSGVDRFKRQFAHLEEG VAQGDKTSPQLRQHVSLPRERVVRNGDEPDPTADYCIKLHVGEQPGHSSVTDGLNKPL LSARNFLKSESIGASQCVVIKEKREKDEESMSEYMNEAADGVPHKIAQLKT</aaseq>

Gene Sequence

<dnaseqindica>4949..5023#4079..4276#3602..3704#3337..3410#3117..3254#2864..3019#1221..1370#920..979#271..807#156..170#ccctctgccccctcgccttatccgcatccccaaccgccactacaggcagcggcgcagcaccagagagcggaggcggcgggaggagcgggattcggagggggagcgcggccacggaggggcacacgggggcgcaacagggtcgggcgctcggcgccatggatgctaagaaggtgcgcgggcttaggaccccaccgtgccccccaaatcgctgcgattttgtggttgttcgggacgcgggtctgatcggttcgctccgtcgtgcgcgcacagggctcgggggagccggagttcttcagcgagtacggcgatgcgagccggtacgaggtcaccgaggtggtcggcaagggcagctacggcgtggtggccgccgccgtcgacactcacaccggcgggcgcgtcgccatcaagaagatcaacgacgtcttcgagcacatctccgacgccacccgcatcctccgcgagatcaagctactccgcctcctgcgccacccggacatcgtcgagatcaagcacatcatgctcccaccctcccgccgcgagtttcgcgacatttacattatcttcgaactcatggagtccgatctccaccaggtcatcaaggccaacgacgacctcacccccgagcaccaccagttcttcctctaccagctgcttcgtgggatgaagtacattcatgccgccagcgtcttccaccgggacctcaagcccaagaacattcttgccaatgctgattgcaaggtcaagatttgtgacttcggccttgctcgagtgtccttcgacgacactccgtccgcgatattctggacggtaaaagaacaatcctagtactagtacagtcagatatgttgagaattgtgttagcccttaagcacccatcatagtttgaattttaattcgttttgtggtccttttgtcgtaggattacgtggcaacaagatggtatcgcgctccagagttgtgcggctctttcttttcaaaggtctgcaaattttcgtcatgctaaagcctgaattttctgctcaattttacacaacctggtcatttcgtttcagagctactttatccccatccgagattattgagttaatgccgtacattaaatcctttatgttacaaaataatgccatgctcttgaactatcgatacatatgcttagcataccaatttggataatttcaaatgcacttgcaccatactaaactcaaatgtgttttttgcagtacactcctgcaattgatatttggagcgtcggttgtatatttgctgaaatgcttatgggaaagccactttttcctggaaagaatgtggtacatcaattggatctcatgaccgacttacttggctctccttcaggagaaactatttccagggtggggttcactttcccagtctccctgcaaatctgcaattagttggagcctgtcttctatgcaatttcatttaacctttttcctactgatggtcattatcatttcttatacccggacatttttaggaggttcaaattagcgggctgcgggcatttctgttatatttaaacctacaatttatataaatatcagcaaaattactttctatcatgacagcctaaaagatgattacttcaatgcaagctgtgtagagaattctgaacaatgttttagccaattagttcataggtgaatctgtctgtggtcctagaaactttctactcgcgctgtatggaacacatgaggttcgtgagacacatcaaacagttcactcatcacatatttattggaaataacttagttatactcaggctgcataagtagtttcaaaaatgctgagaatggcttggctcttgtctctaggataatgtagtgatggagttttcttgtactggtgttattatacacaaactatctgcacccctatcaatattgaaatactcataaggtgaaacatctacctttatataaagtataaatgtaaaccaaccactgtaaattcgatgtgaagcgtttacttagtttataatgaattatcttcaatattttaaggcatgtttgtccatggttggcttctccaatacttaagttcatttgaggctttagcttataagcctttttccactgcttcagtttatttggagattatactagaaaactggctcagggttgatgttaagctctccaaaactacatatctattttcaagaacacaaatggtgaagatgaagcttggaagaacaaatccgaaatttatattgcatttacattttgaatacattagccttgatttttaatattaatcagtctatcaattaattgtaggatgagttcgatgatggggatacaacctctatatttaaatatatgacattgttgactttattcggtatttggtgttcaaaaggccatgtttgggggagcttaagattctaagaatttactggttggtagccagcttctgagaatctggggaagctgctaaacccagcttaaggcttctaattcattttttgaattctacaactacagattcttagaatctgagtggcaatctagactgtttagggagctcttaattcttggagaaactgcggttgctaaaagctccctctataggtcctttgaccactatttctctattagaatgtaatgataatatctaacaaaattataatattgttaaacgtacttataaagaaaaatctacccatatgatttttatgttttcaaactaaatattttgagagctgttgatggtcaaagttctaaaacattgaccgaataaagtcaatagaacacattatgtgtccactgttttcttccaacaatcagttttacaattgaagaagtacctttagaaattatacttcaaattttgatactatttgtagattcggaatgagaaagctcgacgatatttgggcaacatgagaaaaaagcctcgagtgcctttttctcagaaatttcctggtgcagacccaatggctctccatttgcttgaacggttacttgcttttgatcccaaggatcggccaactgctgcagaggtaggaatgtagctactagccagcatagagcaattgctcaaaaatgttattctaatattcgttatccattatactgatattatagttatgtgtcaaggccttaacagatccatactttactggattggcaaattcggaacgtgaacccatagcacaacccatctcaaaactcgagtttgagtttgagagaaggaagctagcaaaagatgatgtccgggaattaatttacagagaggtactgctaatcttttctaccatgaggattttggtaatagtcttttcttatgcatggtgtctctctctctctctatctttagatattagagtaccatcctcagatgatgcagaaatatcttcgtggtggggatcagtcaaactttttgtaccccaggtcggatgcactatataatgttaccaacagtttccactatctttgtaaactgtatgcagttcatttattcattttaatcatagtgatacacactgcaatcaatcgtgacttatcatacttcattttttcattcacacacactattgattgtggacatgttgcaaataaactgatggctatgctgttgacagtggggtggatcgttttaagaggcaatttgctcatctagaagaaggtgttgctcagggtgacaagactagcccgcagctaaggcagcatgtttctttaccaaggcaatagttctgtctcatatttctactgaagacaattttcttttctgaagtagaaaaaacctatcgtgccccatttcactaaagtgaaattccacagttcattggtttatacttttctatatgaacaagacgtagtctgcatgcctatgaggtggatcaaacacaaacacttttgacgttatatattaatgtcattaagcactatggcaacaaaggggagtattaagagtgcttcccttgttgagacatcaactaaaattcactgccttcaataatacaatttttatagatagtgaaaatggtttacattcccggccttttccatctttcagtcttttttctcttgatctaatttgtttcacatatcgtttcagggaaagagttgttaggaatggtgatgaacctgatccaactgcagattactgcataaagttgcatgtaggtgagcaaccggggcactcatcagtgacagatggactgaacaagccactcttaagtgctcgtaacttcctgaagagcgaaagcatcggtgcttcccagtgtgttgtcataaaagaaaagcgagaaaaagatgtaagtgatttcatgcagcaaataatcgtaagcataattatgtacattgtcagttactaagtcaaaaggtttgattatgtaccactttttaaatcacaaggttataaaaggaatgtgcctgtctgaagtgcagttgaaggttataaaagcagatacccatgtagaactttatagccgactctgttaaaacttacagaatcccatgctcattacatcaaaactttccttcatgaatttgcacagtttttgttggctgccttgcttagaacaaattgtttgttcagtggagccaatttaccatcccaatggcctagtggctcctaactttcagaaaaatgcttctagattcactgaatgtttaggtgtcttttatgattatggccaccggattatcatggcttcccaaactcctaaacagtatgatgtttgcaaaaactttctttatcaacatttcttaagagacctttctaaaatcaacttatcaaccttttaatttttaattcattcatttctgccctcgaataattgtcataaactcacttttatccatcatccatcagcactttcaaatccttcggagtttcatatttataactcgtgttaatttcttaatttctcccctgatgcggtaacaaatgttctaacttcagcttttttccctgatgtatgcaggaagaatctatgtcagaatatatgaatgaagcagctgatggggtgccgcataagattgctcaattgaaaacataagtatctcttactgtacaggtgatcaatccatatagcagcacgtagatatagtctaaacttaagaagggcagataaatgaattagatatttaagtagccacagtttttctcggctccttgttgggatccatgttgtgttgaaatctctcccctgattttttcgaggagctaagatatatttgacttcagctcctgattttagtcgatggatttcactgtcaccctatactttattcttagccgagcataggagacttagtcactgattagatcatgtaactagtgataacaatgtatcaacatatgcatgaattaactc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0643800, RefSeq:Os01g0643800