Os01g0647000

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0647000| Description = Cyclin-like F-box domain containing protein| Version = NM_001050244.1 GI:115438858 GeneID:4325927| Length = 1789 bp|...")
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Gene Name

Os01g0647000

Description

Cyclin-like F-box domain containing protein

Version

NM_001050244.1 GI:115438858 GeneID:4325927

Length

1789 bp

Definition

Oryza sativa Japonica Group Os01g0647000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:27830876..27832664

Sequence Coding Region

27830930..27831501,27831663..27832347

Expression

GEO Profiles:Os01g0647000

Genome Context

<gbrowseImage1> name=NC_008394:27830876..27832664 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:27830876..27832664 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccgaccaccaccacctcaccggcgaccaccacccctccccggcgagcgccgccaccaccgctctaggtcccctgctcctcctcccgtcggagctcctccacgacatcctcatccgcctcgccctcccggagctcctccgcgtccgctccgtcgcgcgcccgctctcccacgtcatctcctccccggacttccgccgcctgtaccacctctcctccgccgcctccgggccaggccccgcggccgcgtggctcctcgtcttcaagaagctccgcccccgcgacgccgcgctccgggggttccatgggccgtccggccgctggttccgcatccccgtctccgccatcctcgcgcccgcggtgccacccggcgaggacctctacttcctggccgcgtccggcagctccttcctcttcgccgccaacggccgccgcgagctcgtcgtcgtcgacctctcggcgcacgccgcccgccgcctcccgccgtccccgctcggcccccgcggcacctcctcctggcgccgcttcggcctcaagctcgtcgccgatccccccgggtcgagccagtttaggtttctgttcgctgagctggtgaacaacacgccactcctcttcgagtaccagtccgagacggacacgtggcagtcatcggaggcggtccaggcggagggggcgtcgacggcggccgggacggaggggacgttcctgtgcgcggcgcacgccgggccggactgcgtgatggtgtactccgggccgggcgtggagcggccggtcttcttccggccgcggttcccgcacaacccgaacggcggcggcgacaggctccacgtgtacggcgacgggagcgccgcggtggtccggtcgacggtgatcgacgagccgggcaggccgcgggtgaaggtggtggccggcgtggacctgtacgggttcgggtcggtcgtcggcggcgactggcagctggcctccaccgtgccgggcgagctggtggaggggttccggaagccgtacgccgtgatgaccgggctgctgtcggagcgggagggcgtggtccggctcgtcctcatctccaactgccgtggcgcctgggacatcgtgtggctgtcgtacgaccgcgcccgcggcgagtggtggtgggtgcccgtgccggactggggcaccaaggggctcaacgtggccggaatcgccgtctcctccaccttctcccgcctctggccgccggccgccgcctcgtcctgcaccaccaccacctcccagtga</cdnaseq>

Protein Sequence

<aaseq>MSDHHHLTGDHHPSPASAATTALGPLLLLPSELLHDILIRLALP ELLRVRSVARPLSHVISSPDFRRLYHLSSAASGPGPAAAWLLVFKKLRPRDAALRGFH GPSGRWFRIPVSAILAPAVPPGEDLYFLAASGSSFLFAANGRRELVVVDLSAHAARRL PPSPLGPRGTSSWRRFGLKLVADPPGSSQFRFLFAELVNNTPLLFEYQSETDTWQSSE AVQAEGASTAAGTEGTFLCAAHAGPDCVMVYSGPGVERPVFFRPRFPHNPNGGGDRLH VYGDGSAAVVRSTVIDEPGRPRVKVVAGVDLYGFGSVVGGDWQLASTVPGELVEGFRK PYAVMTGLLSEREGVVRLVLISNCRGAWDIVWLSYDRARGEWWWVPVPDWGTKGLNVA GIAVSSTFSRLWPPAAASSCTTTTSQ</aaseq>

Gene Sequence

<dnaseqindica>55..626#788..1472#gtcccccaaacaaccccatccccaagaaactaaacctcatccccgcccccacccatgtccgaccaccaccacctcaccggcgaccaccacccctccccggcgagcgccgccaccaccgctctaggtcccctgctcctcctcccgtcggagctcctccacgacatcctcatccgcctcgccctcccggagctcctccgcgtccgctccgtcgcgcgcccgctctcccacgtcatctcctccccggacttccgccgcctgtaccacctctcctccgccgcctccgggccaggccccgcggccgcgtggctcctcgtcttcaagaagctccgcccccgcgacgccgcgctccgggggttccatgggccgtccggccgctggttccgcatccccgtctccgccatcctcgcgcccgcggtgccacccggcgaggacctctacttcctggccgcgtccggcagctccttcctcttcgccgccaacggccgccgcgagctcgtcgtcgtcgacctctcggcgcacgccgcccgccgcctcccgccgtccccgctcggcccccgcggcacctcctcctggcgccgcttcggcctcaagctcgtcgccgatccccccgggtcgagccagtttaggtacccgtctttttctcgcccgaggattctggaaatcttccaaatagtaattacgtaattaattactgttacgtattactccactccactactactactgtgcattgctgaagaacagtcaaactcaattgttaattggttgattactgttaacttacaaggtttctgttcgctgagctggtgaacaacacgccactcctcttcgagtaccagtccgagacggacacgtggcagtcatcggaggcggtccaggcggagggggcgtcgacggcggccgggacggaggggacgttcctgtgcgcggcgcacgccgggccggactgcgtgatggtgtactccgggccgggcgtggagcggccggtcttcttccggccgcggttcccgcacaacccgaacggcggcggcgacaggctccacgtgtacggcgacgggagcgccgcggtggtccggtcgacggtgatcgacgagccgggcaggccgcgggtgaaggtggtggccggcgtggacctgtacgggttcgggtcggtcgtcggcggcgactggcagctggcctccaccgtgccgggcgagctggtggaggggttccggaagccgtacgccgtgatgaccgggctgctgtcggagcgggagggcgtggtccggctcgtcctcatctccaactgccgtggcgcctgggacatcgtgtggctgtcgtacgaccgcgcccgcggcgagtggtggtgggtgcccgtgccggactggggcaccaaggggctcaacgtggccggaatcgccgtctcctccaccttctcccgcctctggccgccggccgccgcctcgtcctgcaccaccaccacctcccagtgaaccgaactcgccggcgtctctgcgtcaccgtgcggcttacggcgagcggtggggaattggattgttaggcccaacgtggcaatgggccccgcacccgtgtaagtggtgggcctcctcccccgtgcccgtggggccgtcgcataatgcgacatgatcttgcacaatggcttctccgatggcgacaaatcgtcgagtgcgagtgagtgtgcttcagataaggaggggtgtactggcgtgcgtgcaagcactcttctctatagttctcttttagtatcactgttcattgttcataagccgtgtgagtgtagctttgtgtt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0647000, RefSeq:Os01g0647000