Os01g0654200

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Revision as of 04:51, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0654200| Description = Peptidase M50 family protein| Version = NM_001050281.1 GI:115438932 GeneID:4324173| Length = 4518 bp| Definition = ...")
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Gene Name

Os01g0654200

Description

Peptidase M50 family protein

Version

NM_001050281.1 GI:115438932 GeneID:4324173

Length

4518 bp

Definition

Oryza sativa Japonica Group Os01g0654200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28278630..28283147

Sequence Coding Region

28278974..28279150,28279608..28279937,28280062..28280493,28280569..28280625

Expression

GEO Profiles:Os01g0654200

Genome Context

<gbrowseImage1> name=NC_008394:28278630..28283147 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28278630..28283147 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcattattactacctgtggtgctgtatcctctctttgtgactggtggtcttatgattacaggagtcccagaagcatctcctctgtcaggatacttgtctgctcacaattttatcctttctgtggatggattgaacataacaagagctgatgaatggatgaaaatgcttactcaggacaatgtagtacaaataagcagccgtgatctccttgaaggctctgaaggctatcgtgccactggttctagaaagggttactgtgttcccaactcatggatggatgcaagcaagaatctttggcagataaatgacaagctatcttgcccagatgatctggtagcctttcaaagaatgagtgagaaaggtattggcaagaaggaagttgaagacaaatattgtttgattgcaaaagatgttgtcaagcttaaaaaatgtggaaatggatggcggggggccgaagatggcagaagcaactttgcatgtttggaggatgagtactgtttggtgcctgttctaggccctgggatttcatggatagagatctcttatgccagaccttattctttggagtgcttacagaaagaaaggaactcatcattgctgcatgatggaaataataaccctggattgggtccttgccagggaacttttgtttatgcgggtgatctgttatcagcagcacattctattaagttatcctcttaccgacctcgatggcctctcttgcttttcattgcagatgttcctcgtatcttgcaagatggtttaagttgtttatttcgtgtgtctgcagcattggctgtagtcaattgcttaccagtgtactttcttgacggggaagcgattttggagactatgttaagctacttttcttggtttactcggagacagcagcgcaatattcttaaggtttgccgctttttgtggacgatcttgtccattgttttgttctcaagaaccctgtattccatgacactatattatggctttgtataa</cdnaseq>

Protein Sequence

<aaseq>MALLLPVVLYPLFVTGGLMITGVPEASPLSGYLSAHNFILSVDG LNITRADEWMKMLTQDNVVQISSRDLLEGSEGYRATGSRKGYCVPNSWMDASKNLWQI NDKLSCPDDLVAFQRMSEKGIGKKEVEDKYCLIAKDVVKLKKCGNGWRGAEDGRSNFA CLEDEYCLVPVLGPGISWIEISYARPYSLECLQKERNSSLLHDGNNNPGLGPCQGTFV YAGDLLSAAHSIKLSSYRPRWPLLLFIADVPRILQDGLSCLFRVSAALAVVNCLPVYF LDGEAILETMLSYFSWFTRRQQRNILKVCRFLWTILSIVLFSRTLYSMTLYYGFV</aaseq>

Gene Sequence

<dnaseqindica>3998..4174#3211..3540#2655..3086#2523..2579#tgtccaagccgtcgccgtcgccgctggaatgatcggcggcgtcggccgcagcaggcggcgtggccgtgcgccgccagttctgccctcgagcgccgccgcccgccgcgccgagcactccgtctcttgctggtcagtgaagtagagagattctgactcaaaaccgctcgatctagtcagattttagtagtactagttagcttcttaccctcaccaaaccctaagtcgcggctaaatcgagcctatgcttgcgttcttcgtaattattttcccagtacttttacattggtttcttgtagagcagagcttgatttagagcttgtaggatgcgggcaaccgttaggcgaaattataaagcttgatttggaaatttaacatgggttggcaatgttgtagtttccattcttctagtagtacactttcaacagttggtgaaaattcgatttgtgtgttgtatcgatttaccaaatttcagtgatgtatcctgttgggttcactggttcagacctgctgttgggatacaccattcatcctcagccctaatcctgataaattgaattgtctcccctgcatctagccatccgcagaatggttttaattttcaggacaacaagtttctctgttccttttaaatctgcttatcagcttatcatggaaaaattgcattcgactctatatagtactgcatgagatgttggacacgtattttatctttcatttattcttcaatttcttgtatatttcaatgcagtttactcctgtcattttgtattagtggaggcaatgattattatattcacttactgtgcttatacaaaatttaggtactgtgactgcaaaatatattccttcaatgacatcatatttaatttgggatggagatatgctaggtatgctttatcttaacttttgaccttttatcttctttaattactcagtgtttctttgatgtgcatattgtaccctttttccccgcgaaaagaggaatatatttatataattacccatggacttttacatactataaacaagaatatagccaagttagcaccttatttcatttttgtacataagatgcaaaggtttcttttctttaaaaagaatgagaaaaaatgcactctaggagccatctgtaccatttggagttaaatttcttcgctgttgctgaaagttttagctcatgcccctttggggaggtgtaatctgatggggtaaccatattgatagtttccttgctgctcactatgctgatgccaagatatttgaagttatggtaaattagttaactttctttttggcagatacatgagagcatggttttctgcaggggtttatttctctgttgttgctttagttggaatatcagtggtaagttcagtgtcgaataattaccaatactctgaaatacgtatgccaactaaaaaatgttcattaccttacctatatcatgaatctgttgacattgttgcttaaatcgttagaacagccagcacaccctatcaatctcgacatttgtttttatgaactgtgtaggatatcactgggatagtagtggtcttcatcctttctttaaaattttggaaagtttcatatgttgtacttgccttgaaatgtgcacgtttatgtactgtggtctgttgcatgtttcagatgctattgtgggactcaattggtgcagtttatttcagtggtcggtcatttagtacctggctacaaaatctactggtgactacaatttgtcccttcatttttcaacttctaacatcaaccattcagcatgcccttaatctattgcaggcttccagctttggcatatcaataatggacatcgcagcaatcatagcatcaacagttttttctattgcttttcacgaatttggacatgctgttgcagctgcaaggtccttatttgctgacctacattttctacgagatgttctgcatgtgtttgcattcatttgcagaaggcatactttatatgttgacttacaatattaactttcacccgcttacagtattcctttcgcacattgctgacacattcattgctaaatatgcaacagcgagggcatacagattgagtatgttgcggtattcgtagctgcactttttcctggggcattaattgctctgaactgtgaccagctgcaaaatttacctcttttttctatgcttcggatttattgtgcagggatttggcataatgttatggtaagtaacgctggcgtgcatggattatttttttttaaaaaagaagtaaaatatcttgattttatttgaccatatatttctattccttttaattttaaagcgcatttccatctattttcagtatttgtggcatgcatgctaacctatagagaccagaagttgtgaattaaaaaaaggagcacatttgagaaatgccagttcggcagttctgcattactgctgcagcttcttatcatatttttgtaagcacgttcattcataatgatgtttatttatgatttcatgtctaatagttatgtggagtatgtgtcatcatggcattattactacctgtggtgctgtatcctctctttgtgactggtggtcttatggtaagtctgtttctttgaacttgtccttatttagatctccatgatccttcatgttctaaaaggctgtcagaacagattacaggagtcccagaagcatctcctctgtcaggatacttgtctgctcacaattttatcctttctgtggatggattgaacataacaagagctgatgaatggatgaaaatgcttactcaggacaatgtagtacaaataagcagccgtgatctccttgaaggctctgaaggctatcgtgccactggttctagaaagggttactgtgttcccaactcatggatggatgcaagcaagaatctttggcagataaatgacaagctatcttgcccagatgatctggtagcctttcaaagaatgagtgagaaaggtattggcaagaaggaagttgaagacaaatattgtttgattgcaaaagatgttgtcaagcttaaaaaatgtggaaatggatggcggggggccgaagatggcagaagcaactttgcatgtttggaggtaaaataacactgaattagagcccttaggaataatcctggaggattggttccttattatagtatcgcttatccttttgcattacctttctcttatttatacattttttgatcgattctgacaggatgagtactgtttggtgcctgttctaggccctgggatttcatggatagagatctcttatgccagaccttattctttggagtgcttacagaaagaaaggaactcatcattgctgcatgatggaaataataaccctggattgggtccttgccagggaacttttgtttatgcgggtgatctgttatcagcagcacattctattaagttatcctcttaccgacctcgatggcctctcttgcttttcattgcagatgttcctcgtatcttgcaagatggtttaagttgtttatttcgtgtgtctgcagcattggctgtagtcaattgcttaccagtatgttctctattgaagtttcattctttattgttcatcttacattctcacatcatgcctcagtgcctcatgacattgccctacatgtaggatttccttctttttttatcttattctttgcagcaaaggaatttggcaaataatttgagaaaagtaaaaacatgcatgatatgatagttgaaagttgaaagctgaaacccttgaagtactgatatttgctagaaacctgccgtttggcctattgttgttgctatttgcttaagctcctccttgtattcttctgaaaccccaacatatacaaatcaattggttacagaatgctttagctttctatgctcttcttttctgaagtcacttcgattttgtagcacctggcttaaatttacactgcattaaagtaacatactgcgtgcacagtatagtactttttttagcacctaaccatgaaacgctgcaggtgtactttcttgacggggaagcgattttggagactatgttaagctacttttcttggtttactcggagacagcagcgcaatattcttaaggtttgccgctttttgtggacgatcttgtccattgttttgttctcaagaaccctgtattccatgacactatattatggctttgtataactcctttatatggaaatgtctcttttttttttttgagtttatcttatcataataccatagatctgatcaactgtatgagatcatacacaatactggtaatatgtaagacggatgctctcctggtctcctgacaaaattgcaggccagcattgttacagaacaaagtggccttaactttagtgagtttatgattaaaatttagacaattcccgagccctcatgcttgtagaatattttgacccaagatatgagtgggtttgtgggtatgcacctcactgttgtaagttaaaacgggaatatcaaatttcaattgatctcaacatgtttcggtggagatctgtttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0654200, RefSeq:Os01g0654200