Os01g0664000

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0664000| Description = Similar to C-terminal peptidase of the D1 protein (Fragment)| Version = NM_001050324.2 GI:297597319 GeneID:4327866| ...")
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Gene Name

Os01g0664000

Description

Similar to C-terminal peptidase of the D1 protein (Fragment)

Version

NM_001050324.2 GI:297597319 GeneID:4327866

Length

4455 bp

Definition

Oryza sativa Japonica Group Os01g0664000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28871508..28875962

Sequence Coding Region

28871508..28871867,28872067..28872186,28872889..28873026,28873268..28873372,28873471..28873639
,28874095..28874171,28874384..28874428,28874572..28874610,28874962..28875045
,28875434..28875472,28875551..28875613,28875697..28875826,28875907..28875962

Expression

GEO Profiles:Os01g0664000

Genome Context

<gbrowseImage1> name=NC_008394:28871508..28875962 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28871508..28875962 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggctactcccctacgcgccgtcgccgcggccgccgcagcgctcgctcgccacccgcaggaccaagccagggccgccgtgcgcgctccccttccccgacgccctccgcgccgctgccgcggccacggcggccgccatgtccatctccctctccctcctcaccggcgacgccgtgggggcggagcggccgcggggccccgagctctgccgcgacggggccgccgccgagaccaaggaggaggtgaggaggagcgaagtggtgacgaacgagcagctcgtggaggaggcgtgggaggtggtcaacgaggggttcctcccggacgccggaagccgtccctggtcgccggagatgtggatgaaaaagaagcaagatattgtccaaacctcaatcagatcccgttccagagcccatgatatcattcagaaaatgctggctaacctgggtgacccatacacaaggttcctgactccctccgaattctccaagatgtcaaaatatgacatgacgggaataggattaaacttgagagaaattcctgacggcaatggctcttccaagttgatggtattagggctcatattagatgggcctgcccactctgctggtgttagacagggtgacgaacttttgtcagtcaatggcattgatgttatgggtaaatctgcatttgatgtgtcatccatgttgcaaggtccaaaagatacttttgttacaattaaggttaagcatgggaactgtggtcctgttgagccattgaaggtacagagacaactggttgctcgcacaccagttttctatcgattggagaaaagagaaaatgaggattcagctataggatatattcacattaaagaattcaatgcagtggccaaaaaagatttggttagtgcactaaagcgtctacagaactcaggtgcctcctattttgttttggatttgagggacaatcttggtggactagtccaagctgggatagagactgcaaagctcttcctgaataaaggagacacgctaaaagttactgttcatggatactacatcaaaatgaaggtgatttatactgctggtcgtgatcgtcaagtacaaaatacaattgttgctgaaagggaacctttggttactactcctcttatggtacttgtgaataacaggacagcaagtgccagtgaaatagttgcttcagcacttcatgacaactgcaaagctgttctggtcggtgaaaaaacttttggaaagggcttaatccagtccgtatttgaacttcatgacggttctggcattgtcgtcacagtgggcaagtatgtgacaccaaatcacaaagacataaatggaaatggcatagaaccagactaccgccgcattcctgatttcaatgaagccaccgagtacctttcacgttgccgaagcaaagaattaagctga</cdnaseq>

Protein Sequence

<aaseq>MRLLPYAPSPRPPQRSLATRRTKPGPPCALPFPDALRAAAAATA AAMSISLSLLTGDAVGAERPRGPELCRDGAAAETKEEVRRSEVVTNEQLVEEAWEVVN EGFLPDAGSRPWSPEMWMKKKQDIVQTSIRSRSRAHDIIQKMLANLGDPYTRFLTPSE FSKMSKYDMTGIGLNLREIPDGNGSSKLMVLGLILDGPAHSAGVRQGDELLSVNGIDV MGKSAFDVSSMLQGPKDTFVTIKVKHGNCGPVEPLKVQRQLVARTPVFYRLEKRENED SAIGYIHIKEFNAVAKKDLVSALKRLQNSGASYFVLDLRDNLGGLVQAGIETAKLFLN KGDTLKVTVHGYYIKMKVIYTAGRDRQVQNTIVAEREPLVTTPLMVLVNNRTASASEI VASALHDNCKAVLVGEKTFGKGLIQSVFELHDGSGIVVTVGKYVTPNHKDINGNGIEP DYRRIPDFNEATEYLSRCRSKELS</aaseq>

Gene Sequence

<dnaseqindica>1..360#560..679#1382..1519#1761..1865#1964..2132#2588..2664#2877..2921#3065..3103#3455..3538#3927..3965#4044..4106#4190..4319#4400..4455#atgcggctactcccctacgcgccgtcgccgcggccgccgcagcgctcgctcgccacccgcaggaccaagccagggccgccgtgcgcgctccccttccccgacgccctccgcgccgctgccgcggccacggcggccgccatgtccatctccctctccctcctcaccggcgacgccgtgggggcggagcggccgcggggccccgagctctgccgcgacggggccgccgccgagaccaaggaggaggtgaggaggagcgaagtggtgacgaacgagcagctcgtggaggaggcgtgggaggtggtcaacgaggggttcctcccggacgccggaagccgtccctggtcgccggagatgtggatggtgagcacttaacaaatgattgaatatgaactatgaagtggttcaattgcctatatggaagtctctttgtacattaatggatttctagtcggaatggccagtcttctgaacatattttatcctccatagatttatctcagggaaacgttatatcttgaatatgctaattggctaattgcttcgcttcaatgcaatgcagaaaaagaagcaagatattgtccaaacctcaatcagatcccgttccagagcccatgatatcattcagaaaatgctggctaacctgggtgacccatacacaaggttcctgactccctccgaagtaagtaccttacaaatggcactgttctttttttggagaatgacaaatggaagctcagcatattggagaaaacatcatcctattacacgagtagaactgtacaacttgttttttttaaagagagaaagagaggagagagtatgagcctgaataatttacatttcccaacatgtttagcctacttatagtcggtgggtccactaaatgccattccttgtttctcctagtgatccatggtttttgtagcaattagctattctgacattgttgtttctgaatttagtgctaaagttggcatgaacctgtttttagaatctgggttgaccatgggcctcggcctctcgggccaatgctcatgacaccattatttttttaattggcaagtcagaatcgtgtgcaaatgactatatattgaccatcaaaaagtttttgggatccctgtgacttggacctttactgccaactattgttttgcgtgacttttacacttagggaatagcgaatttgtgtcaagagtttagacaccagaaaactcaacgctccacaatgatgaaatgatgatattacaaaaccattttttgacgcatttcctttgtttcactgattttacttattgctgattttgcatgaagatatgctatatcttctaactgtacttcagttctgatgatattttgcatgtgttaaatcaatctggtgaagttctccaagatgtcaaaatatgacatgacgggaataggattaaacttgagagaaattcctgacggcaatggctcttccaagttgatggtattagggctcatattagatgggcctgcccactctgctggtgttagacaggtatcaacaactcaacatatatacttttcaattagtaggcatgcttttcaatcataacattggtttgattgactatttaattatttttatgttttatgtaattcctgttgatagtattcttatcacagagaactgttgtttgtcattttttttgtatgaaatactgtagtcttatttagctggtttttggataatatgcacatacttatctttcctgtcctgtctttttatctcttattagggtgacgaacttttgtcagtcaatggcattgatgttatgggtaaatctgcatttgatgtgtcatccatgttgcaaggtccaaaagatacttttgttacaattaaggttatgaataatcttataaacatcatacttgtcttttgcccagaacttctttgcgctccttattataactatctcaatattgcttgtatattgtataggttaagcatgggaactgtggtcctgttgagccattgaaggtacagagacaactggttgctcgcacaccagttttctatcgattggagaaaagagaaaatgaggattcagctataggatatattcacattaaagaattcaatgcagtggccaaaaaagatttggttagtggtgtgttgctggtttgttaaccttatcaactttcattttttagctgcacttagctgcattgctttcatagctgaaccgttctatgcatagaacttattgcaaatggccatgtagtatctaattcttaagccaaaactgctatgcatgtacatataactattttcctggctcaaactgtgagcatcaggagaacaacttaaaatattgtttccccttctgcaaattggccatctaacgatgctatttcagaacttaaaatatcgttttcccttctgcaaattggccatctaaggatgttatttctgctgattctgtatgaaactattttgatgttacaaaattttccgatattatttgttgatattccattaaaattattatcggtagatataacttaatataattacattggatggtggcatgttatatccactaacatatgttctcttgtgcagcactaaagcgtctacagaactcaggtgcctcctattttgttttggatttgagggacaatcttggtggactagtccaagtatgcttttttcatttcaattatataaccatgtcagtctttggtctgctaaacaaaattgtgtttgtgggtgccattcttttcctttgaagttcttgagttgtaagcttcttgaaacagttgaggcttatgcatttggataatgaaagacactgatataatttatttggatggggttattcttactcatggtacttttgtttactttaaaggctgggatagagactgcaaagctcttcctgaataaaggagacacggtaattttttacttgcttccatattttgtcaacttctagcacaatatctgttacctgaaaaatctgtccatagaagttaacccaaccttttttttctacataacttcttttaaaatccatcaacctttttgtgcccacctcagctaaaagttactgttcatggatactacatcaaaatgaaggtacttcctggctaaaatggttctagtttaggtttgaacttggaaaaatcaagccatgctagttttttttatgttttctcgaaaacagttattttttatgttagacatgggtttggaattataaattaagagcttgtagttacaattcttgatatgcatttggatagaatcttcgttgaaattcatatacttgtcctgtgcatattaaaaagtttgagggctttcagccaggcatatgattgactaaactgttgttaattatcctttatatcgtgaactgaactttggaggtgtacttttcttaaagaagaactgagatgtagtatttatgcccctatggaacttcttcaggtgatttatactgctggtcgtgatcgtcaagtacaaaatacaattgttgctgaaagggaacctttggttactactcctcttatggtatgtatgctattgtgatgtacatgaacctatctagccaattcaactaattttacactgttacatgcaacagaaagcgaagaccgacaaattacacatatacagacacctattaagttgcacatacagaattctggctttcctattctaactttgacagtgagaatcatcaagctgtagggtgttttatgatttattcatgcccatagttttttatttgcacttttttgatcggctgatttagaagtggaatgatacagatccagttaatcatatacgtaccctttactgaaattttagctgaatcatgcttctctcttttgtctgctataataagatctccacatgctcattgtatctcacatatccattcacaacttcttcataggtacttgtgaataacaggacagcaagtgccagtgaaatagtaagtaccaatttaactttactggtagtattagaatagtatcagcatgagctcaccaatgcactaacgcttttctaggttgcttcagcacttcatgacaactgcaaagctgttctggtcggtgaaaaaacttttggaaaggtttgttaaaaaaaaacacagcatatccaaggaaaagcactctctgtgaccaactggcttatactatgccttggatgcggcagggcttaatccagtccgtatttgaacttcatgacggttctggcattgtcgtcacagtgggcaagtatgtgacaccaaatcacaaagacataaatggaaatggcatagaaccagactaccgccgcattcctggtgcaactcacattcacccattttcttttgttccactcatgtatataatgcagttaacactgaatttcctgttgtgacagatttcaatgaagccaccgagtacctttcacgttgccgaagcaaagaattaagctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0664000, RefSeq:Os01g0664000