Os01g0665400

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Revision as of 04:52, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0665400| Description = Ribokinase family protein| Version = NM_001050331.1 GI:115439032 GeneID:4326855| Length = 5593 bp| Definition = Ory...")
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Gene Name

Os01g0665400

Description

Ribokinase family protein

Version

NM_001050331.1 GI:115439032 GeneID:4326855

Length

5593 bp

Definition

Oryza sativa Japonica Group Os01g0665400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:28941481..28947073

Sequence Coding Region

28941540..28942160,28944219..28944404,28945911..28946106,28946211..28946311

Expression

GEO Profiles:Os01g0665400

Genome Context

<gbrowseImage1> name=NC_008394:28941481..28947073 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:28941481..28947073 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcctactctcgacgctcgcctccgcctccctctcgccggactatcgccggcgacgacctccttcccgggatccacccccaagccgggcagcctctcgttcgccctcaggccgccctccgcctccctgtcatcctccgccagtgccccggcggcggcggcgccgcccatcgtcgtcgtgggctccgccaacgccgacatctacgtcgaggtcgaccgcctcccgctcgtcggggagacggtggcggcgcgcgccggccgcagcctcgcgggcgggaagggcgccaaccaggccgcctgcgggggccgcctcgcggcggggcccacctacctcgtggcgcgcgtcggggacgacgccaacgggcggctcctcgagggcgccctcgcggacgccggcggcgtccgcctagaccgcgtcgcgcgcgcgcccggcgcgccctcgggccacgccgtggtgatgctgatgcccggcgggcagaactccatcatcatcgtcggcggcgccaacatggaggggtgggcctcgggggtcggctcggacgacctggacctgatccgccgggctggcgtgctgctgctgcagcgggagatacccgattgggtcaacgtgcaggttgcgcaggcagcaaaaggtgcaggtgtgcctgttatcttggacgccggtggaatggatgctcctgtccctggggaactactgagcctggtggatatttttagtccaaatgaaacagagcttgcacgtttgactgggatgcctacagaaacatttgaacagatcagtcgagctgcaggagcatgccataaaatgggtgtgaaagaagtgctggttaaactcggatcacaaggatctgctttatttattgaagggggggagccgatcaggcagccgataattcctgccacagaagttgttgatacgactggtgccggtgacactttcacctcagcttttgctgtagctctagttgagggtaaacctaaggaagagtgcatgagatttgctgctgctgctgcatctctatgtgttcaagtaaagggagccatacccagcatgcctgaccgaaaatcagtaatggaccttctggaatctgttcaggttgaataa</cdnaseq>

Protein Sequence

<aaseq>MPTLDARLRLPLAGLSPATTSFPGSTPKPGSLSFALRPPSASLS SSASAPAAAAPPIVVVGSANADIYVEVDRLPLVGETVAARAGRSLAGGKGANQAACGG RLAAGPTYLVARVGDDANGRLLEGALADAGGVRLDRVARAPGAPSGHAVVMLMPGGQN SIIIVGGANMEGWASGVGSDDLDLIRRAGVLLLQREIPDWVNVQVAQAAKGAGVPVIL DAGGMDAPVPGELLSLVDIFSPNETELARLTGMPTETFEQISRAAGACHKMGVKEVLV KLGSQGSALFIEGGEPIRQPIIPATEVVDTTGAGDTFTSAFAVALVEGKPKEECMRFA AAAASLCVQVKGAIPSMPDRKSVMDLLESVQVE</aaseq>

Gene Sequence

<dnaseqindica>60..680#2739..2924#4431..4626#4731..4831#gctttagtccaccccgtgaccttcgctgacaccgtcgctttctctctcatcgatcagccatgcctactctcgacgctcgcctccgcctccctctcgccggactatcgccggcgacgacctccttcccgggatccacccccaagccgggcagcctctcgttcgccctcaggccgccctccgcctccctgtcatcctccgccagtgccccggcggcggcggcgccgcccatcgtcgtcgtgggctccgccaacgccgacatctacgtcgaggtcgaccgcctcccgctcgtcggggagacggtggcggcgcgcgccggccgcagcctcgcgggcgggaagggcgccaaccaggccgcctgcgggggccgcctcgcggcggggcccacctacctcgtggcgcgcgtcggggacgacgccaacgggcggctcctcgagggcgccctcgcggacgccggcggcgtccgcctagaccgcgtcgcgcgcgcgcccggcgcgccctcgggccacgccgtggtgatgctgatgcccggcgggcagaactccatcatcatcgtcggcggcgccaacatggaggggtgggcctcgggggtcggctcggacgacctggacctgatccgccgggctggcgtgctgctgctgcagcgggagatacccgattgggtcaacgtgcaggttgcgcaggtggttgctctaattctctctttagatttgaacaagtttttctcatttacgcactttgttaagtggtcgtcaaattggattgaatttgatagtgtttcgtagctagatatgttccttaataaatttgctaatggcttctagcttggccgtgcctttgaccaaaacgaagtgagaaaatgtggcctacagttaaccgaaattgtgtggtatgatgagcttattgcattagtgcagattagttcaagccttctaggtcatattgcagcaaaaacacagtgtggattggcttttatctgttagctgaacttagctctgttcatttagtttgatctacatatatctgtgtgatggctactccagattatgattttgatctggtcgttggtaggaaactggatagttgattagacatattgagcatagattagaattttctaagcggaagatgcatgttttttttgttgttgacaaaagtattccaaattttgatgtgctgtctgttcaatgcttatcttgttcttagtgaatttgtgttttatgcttattattgcttaatgcactactaaagcttaagtctatgttactccctccgtcccaaaatataacaacttttagccatcaggatttgtcctaaaatataacaacctctccacaaacattctcttcctaaccaatcataaccctccaccattcacttttcctacctaccttcactactcatccaatcacaaccctccatcattcacttctacctactttcttaataaccatgtccaactctaaaacttcttatattctgggacggagggagcataagttttggtgggaagaaccaactttggatttggtattctttcctcatgatatcaaatgatctgagcaaaataattttatgcacactattttgtacactgtgtaagataggatatatctggccacacggcatgttagagaagctatgttttttttttcctaacctgtatgcatggtattatcccaacagcattcacacagtctcctctatcatcaacatcagtttgaacaaaacagggaacatgtctagactaatggcatcttcatttggctggaatttacagtctgttgcgtatgagtgtttaatggacttgcacttgaaacctaggccattcaacactctgattttgatatatataatgctgttagcttgtggtaaggtgctttgcaattatcctatctgtttcactaagctccatagaagcataacaaaccaaccaatgagggttaggacaaaacatgtggattttgtacagggagagcttgttctcatgtgaggacagcatacttttacaacatccagtttctgctttcttctgtaatgtatttgctcataaagattaggtttgcagttacctttgttttcccctattggtgattctgtgatgtctagtattgtttgagtgcaaatgaaagtagagtcatatgttgtgacttgagaatttatatgttgtgacttcaatgcatttaagaaaaataaagcagcgctatcatgattgctgagttgcttcaacatatgtctgaactctgaaaggaatcatatatatttgtctgtgtgactgatttgtgggagtaaagagttaatgattcctgaagatccaacgatgcagaaagaagggtgattcattttatttttaaattcttatggtatctcaagcatgcctccatgcagttatgtgggcaaatgttagactgatctagttaagcacagcatcacgtgcttcagtcctttctgaagaacttgtgaagattagtatcttagggactccacttggaccaaatgatcttgttggctgcacagtgctactttcgtgtttatgttactccgcaatcgatttcaatgtattatcagaatgataaatccaatcttattcgtaattttcatctttcatagattgcactatcatatacttaagaaatctgagcattcatagtagatagttgggaatgctgtaaccaccttgtgtatttacatatccaagcgtagtaaagctgttttgtaataagctgaatttttgttttcaggcagcaaaaggtgcaggtgtgcctgttatcttggacgccggtggaatggatgctcctgtccctggggaactactgagcctggtggatatttttagtccaaatgaaacagagcttgcacgtttgactgggatgcctacagaaacatttgaacagatcagtcgagctgcaggagcatgccataaaatggtgagatgtccaaattagacttattttatgtggtttgtttttatgcacattcttcccctcatattcataacttaactatagctcttaggttacttctccgttcagatttataacatgtgcacatatttctagatttcaaacttcataagttttcaccaacctttaggctatttacattaggtttagcagtacaaaggtggtacctctaaatttgtatttctatgtaattttatataatctttgattttctacattgagcattatgttgcaagatatttctggtcaaagttcaatttgaagactgcgccaaaccaattcgtgtcttgtaaaatagagggagcgaatagatggcttgtattgctgacttgtatcaatactcattggttagttttgattaaccacgactgtttgtttaatattatgtttaggataattgtaacatgaggaattgcatcaaggtaactaatttaagaaaatgcaaaagcctcctgcccttctttcattatcccatttgtgtatgtctctgtgtgcatgtgttttcataccgttagtaggatagatcttgtgttttagttctctggtatgcgaacacatatgttgtctacatgcaagtggatcgggcatacacacgcaaaagggatatttgccatgaccttaaattggatcgggcatacacacgcaaaagggatatttgccatgaccttgaatcactacctatgaatcgtattgctaagtggctagatgactgggtacagaaaacatgattaagcaagatgctgtaacaatttgtgcattttggtttacctaggtggctaggctggcatgtggctatgttatacaccaatggcccaacaattacatgtagtgctaaatcctagatttgagtagttatgctggcttttggcttacttttattgaacaagtgagtttggtaaaagcaggctttgttctctaataaaatggacaggacatacattagttagttgtttagaaagtcaatcccaggaatgatactgaactagtaggttgaataaccctggtagcacaattggagaaataacacttcagcatgtcagcatctgatcagaaactggccgctggctggaagctcttaattaacttcagtacacagaatctgtgtgctttcttcatggagaatctggatgtctcttcatgcttgtctgctgtataaacaggatgagatttttgtggctgcaattacctgaaagtatgtaacctgtgcctaatgtatattgcggtgtaagaaaagaaatgcaaagaaactacaggtgtgttatagctgccagtgcaggggtttggttcttcaaccgaacgtttttcatgtcatttactccaatcactctctttaatagggcatgttcaagttgttctcattggatccagtgtcgagtaatatatatatcatacatattgacggtgcataattgtttatgagaatatgattagaagttgtgatccgattcatctgtgtttttctgtctacagggtgtgaaagaagtgctggttaaactcggatcacaaggatctgctttatttattgaagggggggagccgatcaggcagccgataattcctgccacagaagttgttgatacgactggtgccggtgacactttcacctcagcttttgctgtagctctagttgagggtaaacctaaggaagagtgcatgagatttgctggtactgaaagcaccctctcctcgtcatttgattgcaattgatttcttgttcttcaacattagcatactttgcttgaggcttcaatttccaatttttaatttcagctgctgctgcatctctatgtgttcaagtaaagggagccatacccagcatgcctgaccgaaaatcagtaatggaccttctggaatctgttcaggttgaataactgtagatctcatgattgtttctcttcagcctccattcatcctcaataatgtaagttgtcctccatgctccttatcacttcattctatgatgtatatttggatttttgctgcttaacattgaggtagcggaaaagaagagaaaatagcatcgctttccattcctcctcacatatagaaacagtaattcggaggggattttagttctgttggtttctataactttcctgtttgtgccatactgccatagctttacttacgttacacactgcctgtccttctcgacctaaatcctcactgttggtagatctcatttaatttcacacatgcaactgatgcgacaccctcaaaaacgtgaattctggagccctgtcaatctcagtacccttttgttgggagacagtgttagctcatgctgtcactcaggacaggagggctagtcagttgtcattatccacctcaaatctaaccatcattcgttatcttttttgcagggggcgcgcggccaaattcgacggatccaatgaagctcccatagaccctcatggcctcatctgctctgctcatcctccaataatgtgacaaccttggagtggaaaaacgcatttcccgggtgccactgccatccatagtaaacgcacccaacccccaaataaagaatggacatttcacgcatccatcctgttgctgtaggccactgtaaatacaatgaacagttttcacactgccctggagctatcagacggtgacaccgtgctgttact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0665400, RefSeq:Os01g0665400