Os01g0672100

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0672100| Description = No apical meristem (NAM) protein domain containing protein| Version = NM_001185569.1 GI:297720272 GeneID:9270876| Le...")
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Gene Name

Os01g0672100

Description

No apical meristem (NAM) protein domain containing protein

Version

NM_001185569.1 GI:297720272 GeneID:9270876

Length

4655 bp

Definition

Oryza sativa Japonica Group Os01g0672100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29311873..29316527

Sequence Coding Region

29312447..29312831,29315878..29316083,29316178..29316345

Expression

GEO Profiles:Os01g0672100

Genome Context

<gbrowseImage1> name=NC_008394:29311873..29316527 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29311873..29316527 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgacatggtgcaacagcttcaacgacgtgcgcgccgtggagaacaacctggccaccgccgccgccgtggccgcggccaagaagcagcagcagcagcagcaggtctcccagcacgtcaacctcatcaagacctgcccctcctgcggccaccgcgcgcagtatgagcaggcagcggcggcggcgacgatccaggacctgccggggctgccggccggggtgaagttcgacccgacggaccaggagctgctggagcacctggaagggaaggcgaggcctgacgcgcggaagctccaccccctcatcgacgagttcatccccaccatcgagggcgagaacggcatctgctacacccatcccgagaggcttccaggcactcggcaaggacggcctgatccggcacttcttccaccgcccgtcgaaggcgtacacgacggggacgcggaagcggcggaaggtgcacaccgacgagcagggcggcgagacgcggtggcacaagaccggcaagacgcggccggtgttcaccggcggcaagctgaaggggtacaagaagatcctggtgctctacaccaactacggcaagcagcgcaagccggagaagaccaactgggtgatgcaccagtaccacctgggctccgacgaggaggagaaggacggcgagctcgtcgtgtccaaggtgttctaccagacgcagccgaggcagtgcggcggcggctcggcagcgacggccaaggacctctccgtcgacctcgtcgccggtaa</cdnaseq>

Protein Sequence

<aaseq>MTWCNSFNDVRAVENNLATAAAVAAAKKQQQQQQVSQHVNLIKT CPSCGHRAQYEQAAAAATIQDLPGLPAGVKFDPTDQELLEHLEGKARPDARKLHPLID EFIPTIEGENGICYTHPERLPGTRQGRPDPALLPPPVEGVHDGDAEAAEGAHRRAGRR DAVAQDRQDAAGVHRRQAEGVQEDPGALHQLRQAAQAGEDQLGDAPVPPGLRRGGEGR RARRVQGVLPDAAEAVRRRLGSDGQGPLRRPRRR</aaseq>

Gene Sequence

<dnaseqindica>3697..4081#445..650#183..350#gttccctcctctcctcctttctctctccctcctcccgcgcgcggggtctcgccttaacgtttgccgcatatgggggcgacgagcaaagcgtaggccggagggagggacagggagagagagagagagaggctttctggctcgctctctctgcacgatctctcgtcttgttggattatacagccatgacatggtgcaacagcttcaacgacgtgcgcgccgtggagaacaacctggccaccgccgccgccgtggccgcggccaagaagcagcagcagcagcagcaggtctcccagcacgtcaacctcatcaagacctgcccctcctgcggccaccgcgcgcagtatgagcaggtagctagctagagcttcctccctgctcgatcgatcgatcggtctcctgtgtacatgttggatggcattgagcatggtgtagagtcagttgcaggcagcggcggcggcgacgatccaggacctgccggggctgccggccggggtgaagttcgacccgacggaccaggagctgctggagcacctggaagggaaggcgaggcctgacgcgcggaagctccaccccctcatcgacgagttcatccccaccatcgagggcgagaacggcatctgctacacccatcccgagaggcttccaggcacgtataatatacttacatgcatgcttttcctacgactcatcgacatatatcgaatcagttttagtttcatcagttcatgatctacataagtgcatttgtctcgatcagctagcttgcatgcttaattacattgtgccatcagctatagcaattgcaaagatgatcagatctggacgggacgtggaaactataggtgctgtccgtcacggaagtactcctgacaaaacattttcttgcttggttgattctcagtttaaaattccctattttgatataaagttttactggtcgtttccaatttgatgaccttgcttcatatatgtcaatcatgcgtagccgcttagtatttgtaacatccacactagggtatatacatgtcgatcgtccttgcgtttttcattaatttcgtgtatgtccgatcgtgtgttgttgcatttgagcacgataccgtataaatattgctaaagtttgcctttgaagtaattgcttctcctacttgcataaaagtttatttcacattgaaaacgagtgattgtgacagcacagtgcatcaaaggtccacgtcatgcaggatacacgcaacatcagatcaaagggagaataaactttgaaaagacttgttgcaatatgaactggtttttcccttatccttttatattcctagtatttaatttgcctatatataatggtgtatttgcatgggtaggatagtcattgtatatttgtgcaataaggctatgtttagtttgtgtgccaaattttttttgaactatacggacacacatttaaagtattaacgaagactaataacaaaacaaattacatttgaagtattaacgaagactaataacaaaacaaattacagattccgtctataaactgcgagacaattttattaagcctaattaattcattattagcaaatgtttactgtagcatcacattgttaaatcatggcataattaggctcaaaagattcgtctcgttatttacatgcaaactgtgaattggttttttttcatccacatttaatgctacatggatgtgtctaaacatttgatgtgacggaaaagttggaagtttaaagaaaaatttttgaatctaaacatggcctaagaataactgacagatactttaaattattatgagtgcctttcctgcttttggaaatataatattatattcttcaggggggttgcattccattccacaggataacttgtactattttctaccatagtgatagaaatattgcaccaagagacattatagtgcactgatcatattattttcatggaactctattttcatataagcagttatcaataataaaccacgtgtcaccattgtactatatattaatccagtagaaaatgatatattacaaatacttttatctagcaagaattaattatgattaaaaaaccaatgcaagtggctctttatgtcgtttacaacgcaaacattttttttctttgttggtgctggagctagcggccgttcgtggggtattctcatgggaatattggtgtggtagtctgttagacatatgcgtgttgagctggaaaacaatgtgcatgcaggggatgctccttccatggtacaaagtaattttctttacatttcatagattacagctgacctaaattaattctatctgtaagaaaataattaagccgacaaataaaaatgtgttatttagttccgcacactattttcaggccatatatacattttatttatattacaccaaatttacctagattcagtggctgagccaagatcaagatccacctcgcgcgaaatgcaaatattttttttactaatagtacttgattgcaaaaattctatcggggttaattgaccttacagggtcacagcatggctccactactatctacattatattataagtactccataatgtggataaggattttctgaagtttatcggtgagtaattctttaaattcaaagatagtttcacccttcagcgccatatctccactaaaccactttaaattcagtccgttgtataaaaagtaatctatttttgatagtttatggttaaataatgtatgaagattctaggattgtctatcacacttttataaaagtttaaggttgtagttaacatgcataatcttttcctttttttacaacctgggaaatttcatttctatgttaagagatgcaaaacacaaatacgcccccacctcctctttaaatataattttattcggtgaaactttaaagtttaaccatcaacatctctcaaatatgtatttaatttgaaaataaaaatcaaaagagcagtttttttaagtacttttacaatactaaatttttgttacacattattgttatactaatagaaaaaaaatagtcaaagctatacgaacgaataaagttggtagtgtaatactccctacctcagaataagtttatttttgtctctcccatttattttaaaataaatttatttttgaacactcattgcactagagtttgtgaaagtaaataatagatgcactggaatgtaggtaaaatgaggaataattgcattaagatttgataaagtgagggtatgtctttttgttttatattggtacatatgggatgagtgtaaaataaatttatttttggaacagagagaatatgtattgaaacaccgagcaagtatttttcttatgatggaaaggacgcaaaaaataactaaacaataacagttcagggggagagagatagaatcagagaattgctggagtcggcccaaaaccatcattaactgggcccattcgtcatatagtttgactgaatggtcttatgctgcgtcagccgtcagccgtcaggacattggaactggtcaactggatactacgattacgaagccactcttgttgtgttgctgacctgctgttgcatgcatgcacgtaatataattgattacatttgcatctcttaactcattcgtgagagcagtggcagtgtggcactctaccatattaaccgtactgttctctttctgccgctgttaatttcaggagtcggcaaggacggcctgatccggcacttcttccaccgcccgtcgaaggcgtacacgacggggacgcggaagcggcggaaggtgcacaccgacgagcagggcggcgagacgcggtggcacaagaccggcaagacgcggccggtgttcaccggcggcaagctgaaggggtacaagaagatcctggtgctctacaccaactacggcaagcagcgcaagccggagaagaccaactgggtgatgcaccagtaccacctgggctccgacgaggaggagaaggacggcgagctcgtcgtgtccaaggtgttctaccagacgcagccgaggcagtgcggcggcggctcggcagcgacggccaaggacctctccgtcgacctcgtcgccggtaacaacatcaaggctagcaatgctgctgctgaacaccaccataacgacggcgtcggcggcggcggccacggtggcaacaacagcagcatgctgaaggaagctgcaggcattgtagatttctacaacccagcggcggcgctaatcggctacagccaggcggctcctaacaacagggcggctgcttctgctcatttgacgatgcctaactttgaggtgcacacaggaggtgcaggctttggcccctgatggatggaagaaaacaaagcaaattaaacatatttgactgatgatatatataggttagatggagagggcagggcaggtatatgatggcaaatgtgcatcatgcatgctagcatggtgtaatttgcatcgagtgaaaaaaaaggagtttactaaaccgtctacgtacgtattactggacaataaggagtgtgtcgagtgagttgctgcacagatgttgaagcgtaggggggtcgatattcttacagtgttcattattgttacatgtgtacacatatataacttgacattctcaatttttttgtttaatgatatatatatatatatatatat</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0672100, RefSeq:Os01g0672100