Os01g0672300

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0672300| Description = Conserved hypothetical protein| Version = NM_001050362.1 GI:115439094 GeneID:4325898| Length = 3641 bp| Definition ...")
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Gene Name

Os01g0672300

Description

Conserved hypothetical protein

Version

NM_001050362.1 GI:115439094 GeneID:4325898

Length

3641 bp

Definition

Oryza sativa Japonica Group Os01g0672300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29351012..29354652

Sequence Coding Region

29351015..29351083,29351183..29351287,29353048..29353299,29353527..29354354

Expression

GEO Profiles:Os01g0672300

Genome Context

<gbrowseImage1> name=NC_008394:29351012..29354652 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29351012..29354652 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcaaactgcagatcattctgttcctataggagtgagattgctcaaattgcagttatcaaccattgaggcttctattccaccagaagcaattcaaccattttggactgatggttatcgaaaatcttggggtgtgaagttgcactctacaacttcgttggaggaaatatttcagatgttgacactgctggaagccgcaataaaacgggaccacctatcttcagaatttgaaacaacatctgagttgcttaacttgaacacacaagataatccatcccagaatcatgttggattgtctggatctgctgctgtacttccatgggttcctgacactactgctgcgattgcactacgaatgttagacctagactcagcagtatcatacatgcaaaatcaaaagatggagagaaatggtggagatttcatgaagcctccatcaaggtttgtggctgttaagaatgcacaagaattagatccactggaaacaaccggtttagacctttttgatggaaggtgggctactggtagtggccgtaggggtcgtggacgaggaagtagagggggtagcaggggaggcagaggccgaagtcgaggtggaagggtcccaagaggtattagcatctcatctaggattggatttaaggatgaaaatgaagcctcaaggaagaacactcgtcgagggcgtactcgtggccgtggtcgtgggcgaggacgtcgaactgttaggtcacggcaaccatctgagggcaaaggcagatcaattcccaaggaaaatttgttggggagctttagcatgcttagcaatgcaaaggctgccactgttgaggagtctccaaggagctcaggtgctgatgaatggggcttggagaacagaaggccatatattgatggtgatgagaacagttctggatctcagttagatcaatcagaagataatgaggaaaatggccaacccatggatgaggaatatgatgagcaggttccagattattctagaggctattctggtggctccaggccccatggcatgatagatgatgatgtgagcgaagaagaggatgaagatgtggagggcgatgatgatggggaggaagatgatgcggaccgtgcagttgatgatgttgatgctgagatggacgaggatgatgatataggtgatgatggtgaggatggtggtgacggtggtgacggtgtggaggcgaatgctgatgaagatgaaggcggttcctcgtattcatcggagtacagcgactaa</cdnaseq>

Protein Sequence

<aaseq>MQTADHSVPIGVRLLKLQLSTIEASIPPEAIQPFWTDGYRKSWG VKLHSTTSLEEIFQMLTLLEAAIKRDHLSSEFETTSELLNLNTQDNPSQNHVGLSGSA AVLPWVPDTTAAIALRMLDLDSAVSYMQNQKMERNGGDFMKPPSRFVAVKNAQELDPL ETTGLDLFDGRWATGSGRRGRGRGSRGGSRGGRGRSRGGRVPRGISISSRIGFKDENE ASRKNTRRGRTRGRGRGRGRRTVRSRQPSEGKGRSIPKENLLGSFSMLSNAKAATVEE SPRSSGADEWGLENRRPYIDGDENSSGSQLDQSEDNEENGQPMDEEYDEQVPDYSRGY SGGSRPHGMIDDDVSEEEDEDVEGDDDGEEDDADRAVDDVDAEMDEDDDIGDDGEDGG DGGDGVEANADEDEGGSSYSSEYSD</aaseq>

Gene Sequence

<dnaseqindica>4..72#172..276#2037..2288#2516..3343#aagatgcaaactgcagatcattctgttcctataggagtgagattgctcaaattgcagttatcaaccattgaggtcaagtaacatgttttatgtttgtcacctgcttctaagttgttttttttcttttaccagttgaactgtttggaaacgtgttaatatttttgtttacaggcttctattccaccagaagcaattcaaccattttggactgatggttatcgaaaatcttggggtgtgaagttgcactctacaacttcgttggaggaaatatttcaggttctggatttgctctcctttagttaaaccagtttcctttttgactggcatacatctattacctttggttgcaaacttgaacatttgctggctataaatagctggattacatggttgacttgaggccttaaacaacctcaaacaagaatcaattgagaacaacctcattctttgttaatacatgttgaattgctaaaatagcttgtctcaccttagttatcattttatgatgcgggattttccatcaaattgaccaggcacatggttgattaaaccatgtaattttcatccttactgcagatttgaattaatatattgaactaccagtcccaaggatgaaagacgccaaccattttctttaagaatttacaatttattgatggctttcttgtatcttctttctgtttccttcttctgaaaactaatactacgggggtatatttataggcaaaattggttctgtagcatcgaaagttcccatttttacttttatagcatcgaaagttcacagcttactagaatagcatcgaaagttagctctgtttctcatatttagcattccgtcaacaactctgttagaatctcatcggtttcctttttttttaaaaaaaaacatgtgaaataccagccgtgccctctccttcttccacctccagcccccctctcctttctcttcttcctcctccaatgaacgccaaccggatgccatcctcgaggctcgagcttgtggctgtcagcacgctgacgagctcgaccatctgcacgtctgcacattctcaagctcgaatgaatggtggtactgcagttggttcggctgggcacatgccgatgccacagatggaagtacacggtccatgaggacctgttgcttcaccctgcacaggaaggcaacaatgtcgagctgcattcctgcccagacagcagcggagcaatcccaatttattggaagagaagaatggaaggatctatatgtgtcctgttccaacgttgattactcgatcttccctcaaccaaaataaaattatttccacaaattgcatcctctcaccctcatgagcatttccccttgaaataattggaatttttttttctcactggatcattcgaatcggccgtggtcggaagcaccgcctttttcctccacgctagatgcttagtgcgcgaggaagtccaacagcttggcatcaaccatgctcaatctaacagctccgtgctccaggccatctcgcctccacgggaccatggttccgcccttgtctctttctccctgagatcgaactccactactgccgccctccaacatgctcctgcagccaccctcgagttcgctcccgcagccacaatagaccgtgccagctgccgctgctgagttcatcgactacaccatcctacacctcgcctaccgctgtgccatggaggatgaagaagacgtaggggcaagggggaataagtgacggaagttctaacggagtgttaaaagaagtaacggagatcacttttgatgctattgaagtgaaccacaaactttcgatgctataaaaacaaaaacaagaactttcgatgctatagaaccaattttaccttatttatatgattcatgttatgacagtatgatacttgtgtgtttgtcagtatatctgattgtctgtacagatgcatggatcacatacatattattttgcctttgacccttgatacctctttcatttatcagctttgcacctcaatatcacggctgatgttgtttcacttccttgtagatgttgacactgctggaagccgcaataaaacgggaccacctatcttcagaatttgaaacaacatctgagttgcttaacttgaacacacaagataatccatcccagaatcatgttggattgtctggatctgctgctgtacttccatgggttcctgacactactgctgcgattgcactacgaatgttagacctagactcagcagtatcatacatgcaaaatcaaaagatggagagaaatggtggagatttcatggtaagttttcatgttagacctcaaagtttctgtgctctggtaatcatatgtactagatgttgtagtttgtctgttaacttctccggctactgcatttatacaattaaaccatgaaatgttgtcatatgttagagattatgatttatttgtacattctgcactttgttgtttgtaatgctaccatcagtttcctttcagtttgtaaattgtttcctctgtttgtgcagaagcctccatcaaggtttgtggctgttaagaatgcacaagaattagatccactggaaacaaccggtttagacctttttgatggaaggtgggctactggtagtggccgtaggggtcgtggacgaggaagtagagggggtagcaggggaggcagaggccgaagtcgaggtggaagggtcccaagaggtattagcatctcatctaggattggatttaaggatgaaaatgaagcctcaaggaagaacactcgtcgagggcgtactcgtggccgtggtcgtgggcgaggacgtcgaactgttaggtcacggcaaccatctgagggcaaaggcagatcaattcccaaggaaaatttgttggggagctttagcatgcttagcaatgcaaaggctgccactgttgaggagtctccaaggagctcaggtgctgatgaatggggcttggagaacagaaggccatatattgatggtgatgagaacagttctggatctcagttagatcaatcagaagataatgaggaaaatggccaacccatggatgaggaatatgatgagcaggttccagattattctagaggctattctggtggctccaggccccatggcatgatagatgatgatgtgagcgaagaagaggatgaagatgtggagggcgatgatgatggggaggaagatgatgcggaccgtgcagttgatgatgttgatgctgagatggacgaggatgatgatataggtgatgatggtgaggatggtggtgacggtggtgacggtgtggaggcgaatgctgatgaagatgaaggcggttcctcgtattcatcggagtacagcgactaagattggccagtagaggccttagcgtcctatgccgttatccctaaatttccaatagatgtctgaatcaagtactgttagtgggcattacttgcccttgtggttaaaatgctagacgcggaccagaggtctgtgtgatagataggcatgtagtactgatgttcagtactgcatgcttcttttgattttcggcgtagccgagctgcccaaacaaccgggtagtgtgaagctgtactttgctggtttaaggtgttgggattgatgcgtacaatgtgccaaggcaaagtaccaagtttacctg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0672300, RefSeq:Os01g0672300