Os01g0672700

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Gene Name

Os01g0672700

Description

DNA polymerase, beta-like region domain containing protein

Version

NM_001050365.1 GI:115439100 GeneID:4325901

Length

5617 bp

Definition

Oryza sativa Japonica Group Os01g0672700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29380569..29386185

Sequence Coding Region

29380704..29381136,29381548..29381658,29381755..29381813,29382365..29382460,29382772..29382842
,29382931..29382973,29383090..29383170,29383272..29383331,29383606..29383671
,29383946..29384043,29384382..29384430,29384521..29384565,29385433..29385957

Expression

GEO Profiles:Os01g0672700

Genome Context

<gbrowseImage1> name=NC_008394:29380569..29386185 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29380569..29386185 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggccgaagcgggcggcgtggccatcgtgtacgacgcgctcccggggctgacactggcgttctcgccggaggaggaggagcacctagagggtgcgactgccgacctaggcggcgcgtcgacctccgcctcggctgcggtggtggaggaggtggaggacgccaccgcggcctactccgtgttccgcaacgagatcacggcggctggggacgcgctcgtcgatatccccgcggcggatttcttctccctcgacgtgtcggcggcagttgaagacgagccggccaccccgcgtgcgttgtcgccgcagcctgctccggaggcgacgctatcgggttctctagctcccgctgagcagccagcgcaggggtcggagcgcgcgtggtttcggggagggaggcggttcaggagccctatgctgcagcttcacaaagagattcttgacttctgtgactttatatcaccttctgctgaagaacaatcttcacgaacagctgctgtgaaagctgtctccaatgttatcaaacatatatggcctcaatgcaaggtggaggtcttcggatcttttagaacagggctgtttttaccaacaagtgatatcgatgttgtaatatttgactccagggttaagactccacaagttggcctgtatgctcttgcaaaagcattgtctcagaaaggggttgctaaaaagatacaggtaatagcaaaggcccgtgtgccaattgtgaagttcgtggagagaaaaagtgaaatagcttttgacataagttttgacatggatggtggaccacaagcagcagacttcatcaaggattatgtgaagaagtttcctgctttaagacatctgtgtatgattctgaaagtttttttacaccaaagagagcttaatgaggtctatacgggtggaattggttcatatgctcttctcactatgctcatcacacatttacagttgatctggggaggcaaagatatactggggtatcgtaaaaaggagcacaatttggggattcttttgatcgcattatttgatttttatggacgcaagttgaacaattgggatgttggaatatcctgcaattctgctaggacctttttcttgaagactgataaaaactttgcaaatcctgatcgagcataccttctagctattcaagatcctatggtaccagataatgatattgggaagaactcatttaactatttcaaggtgaaatcagcattttcaaaggcttattctgtgttaaccgatgcgaacttgataacaagcttggggcccaataggagcattctgggtaccattgtcagaccagactccgtgctcctagaccggaaaggctggaacaaggacgctacaatacctgacatgttaacagaaccctgggaaccattaccccgtcagtttgatagcgataatgatgcagtctataattggcatgtgatagatgatgaaccactgcccaggaatactcgatcctcatcggaggacacaaggccatcacctacacaaaaaaggaagtcttccaaaccaaaacagagatcgcggaaaaaggccaaggctgattcttcgagtggtaacaatgctgaaaatggtttcaagcgggggaaaggattagcacaatgtgatagatcgcatcaaagtgcaggaagcagcagacggagcaaagggccgagagagtatgacagatttacaaataccctcccacaatatactcagcacattagtaggtggtga</cdnaseq>

Protein Sequence

<aaseq>MEAEAGGVAIVYDALPGLTLAFSPEEEEHLEGATADLGGASTSA SAAVVEEVEDATAAYSVFRNEITAAGDALVDIPAADFFSLDVSAAVEDEPATPRALSP QPAPEATLSGSLAPAEQPAQGSERAWFRGGRRFRSPMLQLHKEILDFCDFISPSAEEQ SSRTAAVKAVSNVIKHIWPQCKVEVFGSFRTGLFLPTSDIDVVIFDSRVKTPQVGLYA LAKALSQKGVAKKIQVIAKARVPIVKFVERKSEIAFDISFDMDGGPQAADFIKDYVKK FPALRHLCMILKVFLHQRELNEVYTGGIGSYALLTMLITHLQLIWGGKDILGYRKKEH NLGILLIALFDFYGRKLNNWDVGISCNSARTFFLKTDKNFANPDRAYLLAIQDPMVPD NDIGKNSFNYFKVKSAFSKAYSVLTDANLITSLGPNRSILGTIVRPDSVLLDRKGWNK DATIPDMLTEPWEPLPRQFDSDNDAVYNWHVIDDEPLPRNTRSSSEDTRPSPTQKRKS SKPKQRSRKKAKADSSSGNNAENGFKRGKGLAQCDRSHQSAGSSRRSKGPREYDRFTN TLPQYTQHISRW</aaseq>

Gene Sequence

<dnaseqindica>136..568#980..1090#1187..1245#1797..1892#2204..2274#2363..2405#2522..2602#2704..2763#3038..3103#3378..3475#3814..3862#3953..3997#4865..5389#gcggagcctcctacaccggggcggaagggcaggaaacctctcccctcccacgcgccgccgaccgaagccgccgccgccgccgccaccgccgccgcctctccagccgcagccaccgcctctccagccgcagacgccatggaggccgaagcgggcggcgtggccatcgtgtacgacgcgctcccggggctgacactggcgttctcgccggaggaggaggagcacctagagggtgcgactgccgacctaggcggcgcgtcgacctccgcctcggctgcggtggtggaggaggtggaggacgccaccgcggcctactccgtgttccgcaacgagatcacggcggctggggacgcgctcgtcgatatccccgcggcggatttcttctccctcgacgtgtcggcggcagttgaagacgagccggccaccccgcgtgcgttgtcgccgcagcctgctccggaggcgacgctatcgggttctctagctcccgctgagcagccagcgcaggggtcggagcgcgcgtggtttcggggagggaggcggttcaggagccctatgctgcagcttcacaaaggtggggataattttggctttgccatttgttagtttgaatgttggaaaagaacacgatttgtaaattgatttgatcagcttagagatagttcaattcgaattttagcttgggtaggcaatggacttgtttcaatgggcacagattatgcgaatagtttggaactgattttagtttggttctgaaatcttctcagttcagcctaggtggagattgatatttttttaattgtattttgatatcaagctactcgcgatatgctctttcatgacactcttgaagtgttgcctggaaactatggtgttataaacttgggagtgtccacatggtgttaataagcttgagtcagtttatatggtttcaggctggacattttgactgacgcaatactgacatattgtctatttcttacagagattcttgacttctgtgactttatatcaccttctgctgaagaacaatcttcacgaacagctgctgtgaaagctgtctccaatgttatcaaacatatatggcctcaatgcaaggcatagtaacacacattgtccctctcttgccatgtgcgcacgcatttgatcagcattagctgcaagtcatttggtaattctcgttttgcattgcaggtggaggtcttcggatcttttagaacagggctgtttttaccaacaagtgatatcgatgtaagggattttctttttgtgctctccagtggatttttgagcatttaacttgctgttctgttgagttgtatgatcccctggagcataacatttactttgatagcaatgctggaatcgtcatacttaacattttgatggatgaaatagcaatacaggagaaaaagagtaaacacagaaggaaggtgtagctcagcatgcactttctgttttcctgttttgcagaacagggaggaaaaaatgggatgtatataattagcaatgtttactcagttttcctggagtaaagtatgaaatatgtttctccagagtgattttcacccttaattgcattgttagctacttccactttcatatcaaagggatacccttcttctgctattctatgattatgattagaagaaaaccgtgatgcatagcctgttacagacgtgttaagtgttaacccctacttttcacctgggaacaatgaaatacgaatacatggaaaatgtaccctattttgggaaactctctcctttatctgtgagtttatacatggttttgtgatgcaggttgtaatatttgactccagggttaagactccacaagttggcctgtatgctcttgcaaaagcattgtctcagaaaggggttgctaaaaagatacaggtccatttttcactctatttaactctagtttgcaacacttggtatttgcaagactttttcttttattttgttaaagaattactcaaaacaaagccaaagagacaaaaatgcattttttttccaatgaaggaaaagtcaattttctgtccaactgaaatatgcatgacggataaatagctaccttgaaagagaccaaatcccactgtttaaactttcactctgtgctgcagttgtcagttgttattgtcaatcaagtagattccagcttacttatttttctggtggaccattttttttttctttcatggcaggtaatagcaaaggcccgtgtgccaattgtgaagttcgtggagagaaaaagtgaaatagcttttgacataaggttaaattgtgtttctcatcaaatattcctttgtttctagttttttgcgggaatgcttatcgaataatttccctttttctttttccagttttgacatggatggtggaccacaagcagcagacttcatcaaggtactttgtgcagacaaattggctaattacttcactggcagcgtgtgttcgtgaagctaattcgtggggcaaatgattgcatatattttgaacatcatttttactctgtactgcaggattatgtgaagaagtttcctgctttaagacatctgtgtatgattctgaaagtttttttacaccaaagagagcttaatgaggtacaattacttaaaactattagtcgttccattctaataatagattgtttgtaattatggcatttctagatttccaattaccatttcactctttttggtaggtctatacgggtggaattggttcatatgctcttctcactatgctcatcacacatttacaggtaaagctgagtctgttttgtactctaacgtgataatggcctttttttgtatacctgaattgatttgagttataattccttaaaaaatggttgaaaggtacacattgtgtttttcctgacatttaagatttttcttataaatacttaagacacctaacaaacataaatttgggttgtttatacactgcatcgctaatttgttcactgattcagtctaccatatattacttactatggataactgaactttagtgctaagtgttctttttgttagttgatctggggaggcaaagatatactggggtatcgtaaaaaggagcacaatttggggattcttttggtaagcaatacttgttttaaatgtttaacagtaatgcaatgttttacattacaatgctttgacttccgttgcatgtaaagttccattggaaatattcatttcatcgtggtattaaccataatgcatattacatactgcttccgaccatatcgttctcagtatacacttttttacgttgtctttgctaatggaaaggacatgcattctctttataattaagggggcatgacacatgattgcagctctttatagttatttttccccttcatggcagatcgcattatttgatttttatggacgcaagttgaacaattgggatgttggaatatcctgcaattctgctaggacctttttcttgaagactgataaaaagtaaggtgtttactagcgggcttagaccaaatgaatatacaataaaattatcatcttcttagtattttgttcaactgaaaaaaaaggataattttttcagtattcttgtgtattgctgtagaacaagaatatctcatttgcttctaactaggccattctgttaaacacttaaaactgttgaaaatctgctctgtaaagatttataggtgaaatgtcattatataactgaaagaaaatttgatgcgggtgcaactgtttgagttgctaaaattttgactttgttgtataagccatggaacttgtttactgatcctgtttgtgtctctctgcttttcaagctttgcaaatcctgatcgagcataccttctagctattcaagatcctatggtatgatctttggccctttccttttagtcttggttagctttaacatctccagcttcaatggatttacctattgtttttcttatggcctaggtaccagataatgatattgggaagaactcatttaactatttcaaggtattatttcttacaatgttgtttgtgctgtggttgtgatacttgaagtattactcgtttactgtttcataataatatatgcaagcaatatcgatgaaagtgttcctatcttataatgagcctgttactttgctctcaatgccagtttcctgggtatggtgcttacatggtatttcatagcaattttgctaggttatacttgtgttatttgagcaatgttccgtggtactctgtaatggtttggtaccctgtcactgtcagtatagtattttgttcagtgatagagtgatagtccatgttctgttaagggtaatcaatctgaggttatctaagggcactaacagttatgtcctcaagttgtcacctgtcctgttccttttttgccactgttgcacgttcgttaccaaagttcttcaggttttcggaccaagtttcttgaaaccataagaggtggtgaaactggaacatggtataaactagtaccctttttctgttaccagaactagttatcttctttagtttgaaacccgaagcttttgcatatctggattctggagttagtgatataactactggaatttcaaatgttgtggaccttcgtggtatagatgttggtccaaatgggaggtttaagtagggtggtatggccaatggtccaatcttagtttacagaataagtgaacttcctagaatttgcaacatatagttattggacattgatgtttgaagtgtgctgtcacattatctatcacgccacttctatgtgagcttttggcatgtttatgaaaaactataaatgcaaaaaatctgattgagtaatatttttttttgactaactgattgagtaatatttgttaactgctgcaggtgaaatcagcattttcaaaggcttattctgtgttaaccgatgcgaacttgataacaagcttggggcccaataggagcattctgggtaccattgtcagaccagactccgtgctcctagaccggaaaggctggaacaaggacgctacaatacctgacatgttaacagaaccctgggaaccattaccccgtcagtttgatagcgataatgatgcagtctataattggcatgtgatagatgatgaaccactgcccaggaatactcgatcctcatcggaggacacaaggccatcacctacacaaaaaaggaagtcttccaaaccaaaacagagatcgcggaaaaaggccaaggctgattcttcgagtggtaacaatgctgaaaatggtttcaagcgggggaaaggattagcacaatgtgatagatcgcatcaaagtgcaggaagcagcagacggagcaaagggccgagagagtatgacagatttacaaataccctcccacaatatactcagcacattagtaggtggtgactttaggctgttactgatagcatttacagtacagttcgggattgggagatcccacgaggttttgacaggcagaatggcgccttggcagacgtcgaagttcaagcagctttctgtagccatatgtatgatttattatttatttgtttgtctaaggttattcggtcctttgtaacgccgatgaaaccgatatattcagttatattatcatcgtatgaactgcaatttcgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0672700, RefSeq:Os01g0672700