Os01g0673600

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0673600| Description = Similar to Ubiquitin-conjugating enzyme E2| Version = NM_001050369.1 GI:115439108 GeneID:4325905| Length = 3027 bp| ...")
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Gene Name

Os01g0673600

Description

Similar to Ubiquitin-conjugating enzyme E2

Version

NM_001050369.1 GI:115439108 GeneID:4325905

Length

3027 bp

Definition

Oryza sativa Japonica Group Os01g0673600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29424431..29427457

Sequence Coding Region

29424710..29424747,29424839..29424936,29425195..29425268,29425348..29425389,29426179..29426237
,29426888..29426974,29427089..29427116,29427271..29427306

Expression

GEO Profiles:Os01g0673600

Genome Context

<gbrowseImage1> name=NC_008394:29424431..29427457 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29424431..29427457 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccaacagcaacctcccccggcgaatcatcaaggagacgcagcgactcctcagcgagccagcgccgggaatcagcgcgtctccgtcggaggagaacatgcgctacttcaacgtcatgatccttggcccggcacagtccccctatgaaggtggagtttttaagcttgaactctttttacctgaggaatatcctatggctgctccaaaggttaggttcctgaccaaaatataccaccccaacattgacaagcttggtaggatatgccttgacattctcaaggacaaatggagcccagcccttcagattcggacagttcttttgagtatccaggcactcctaagtgcaccaaaccctgatgatcctctctctgataacattgcaaagcactggaaagccaatgaagcagaagctgttgaaacagcaaaggagtggactcgcctgtatgccagcggtgcataa</cdnaseq>

Protein Sequence

<aaseq>MANSNLPRRIIKETQRLLSEPAPGISASPSEENMRYFNVMILGP AQSPYEGGVFKLELFLPEEYPMAAPKVRFLTKIYHPNIDKLGRICLDILKDKWSPALQ IRTVLLSIQALLSAPNPDDPLSDNIAKHWKANEAEAVETAKEWTRLYASGA</aaseq>

Gene Sequence

<dnaseqindica>2711..2748#2522..2619#2190..2263#2069..2110#1221..1279#484..570#342..369#152..187#ccccgtttcccccaccctcggctgacggctcctcctcctcctcctcctcttcctccctcccgatcccctcccccgcacgaaactcaaagcatccccggcgccgcagctccccggaggaggaagcccccgcgccccgccccgaccagatccgatggccaacagcaacctcccccggcgaatcatcaaggtcgcgcctccgatctgattgcctgggcgtagatctccccacgcctctaacccgattccccccttttcttttctttttttttttattttccctttctgtgctgattttttgtttttgctgtctgtgtgttcgcgtctggtttggatctgcgcaggagacgcagcgactcctcagcgagccaggtgcgggcggttttttttttttttatgtatcgcggattttggcgatggtgttgtgtttttccgtggtttgggttcgtgttgttctgatggttttgggttggtttgtttgtgcagcgccgggaatcagcgcgtctccgtcggaggagaacatgcgctacttcaacgtcatgatccttggcccggcacagtccccctatgaaggtacggcacccgatggatacgttatttgttgtagagggtgttacggctcccgatggatatgttatttgttgtagagggtggtcgattagggcgtttctaggtataccgcagaattgggtgattctgtataaacccaattactagaagtgttaattatgtgtcagtcatggacgggcacgcatttcgtaagcctgcttttgcttgattaggctggttcttttgcacttaccagttttagtttctcgggcggcgggcacttgcatgttctatgtgtctcatattccctttctagtatgaagttagtaatgctaaaacactagtgacttttagcaataatgttctaaactcggattatatacgtgacttataagtgcttttcttttatgtgttaacttgtttgatgctttgtgcggcaaaggttgcccttgattttccataaccaaattgatctcttcgatttatttgattagactaattatgagtattgatattgttggcttttcatgttgtggtgtataatttaaatatttcctttcttaaaccctttttgcgttaattcgggttggatatataatgggtgttaacagttagtagctttagatggtttattctattatcatttggcttcctgatattgttctttctatcaggtggagtttttaagcttgaactctttttacctgaggaatatcctatggctgctccaaaggtaacaagacatagataaactttggttatgttttatatgatattatggggactgtataccttcaagctaattatgtcgtatttagaattgcgtgtggttatatactcatattaaaagtcaggacatttctgcattcattgacttgtgttgtgaagcggagcattaatttggtgacattggactcatgcatataaccaaatacaggaaagtagctgaaacatttaatttgtttgaaccattctttggcaaaaaaaaatttttattctttatagcctaatttttagttacccatatttaatcgtgtcgctctggaaccatcgttggttttatatgttatatgtgatgtcttgttggtaatagttttgttacatttgcttgatttccttttagggataatgcaaaccctgcctatttgagatgtaatttgcaatgagatcctgtgccaaggaccaaggttgtaagatatacttttggtcctgtgggaacttttagctgtgtcctgagcatcagcacgccattgcttctcttgaccgtctttttgcttcaagttcttaaaggtgttcttaacatcacattgttcgtttggtgttcagccaaattataccttgattagttatttttttagtctgtttggcttgacaatgtcatagattggaagggtgaagaaatattactcatatgttatacaaccataccggattattgtctacttcagtctccctaagtgtaaagctatataattcattattgtctacctcagtctccattttttctttgttgcgtatgcaggttaggttcctgaccaaaatataccaccccaacattgacaaggtttgcagtcacattcctctttgttatttagtttacttcgtaatacattgtttattcattaataggtttacttttgtagcttggtaggatatgccttgacattctcaaggacaaatggagcccagcccttcagattcggacagttcttttgaggtctctcccccgttgcctgcacatgtgtattagctttttatatcctgcacaaattccttgtctgctaagctgttgtcttattacgattgacatgatttctgttgaatttgaattatttgttagcttacctgcatttagtaattttatcactgcccttgatgtgtttttccaacaaaaactcttgagcattgtcaactattggaagttaggggtatcactttgctatacttaccttgtgacaacactcttttttttcagtatccaggcactcctaagtgcaccaaaccctgatgatcctctctctgataacattgcaaagcactggaaagccaatgaagcagaagctgttgaaacaggtaaattgaagctagcaatccagttaacagtgtctcccctcacactctgattttattggttgcctgataagcgatggtctggcatttgcagcaaaggagtggactcgcctgtatgccagcggtgcataaaacccaatgcctctcgtgatgtaataacccgtcatgctttagccttaatcaaatgccatttgcttgataagaacaaactggagatattggcagtggaagggagtttaaatgactaccgcttgaattatttgtctgtatacatgtggttggttccctttaccctagggcacccttgactaatcagtatctgtggtagaacttggtgctcctccaatatatttattactttatgttggaaaacttaaattgttgaaattggatctttgttcgtgtggctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0673600, RefSeq:Os01g0673600