Os01g0678700

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0678700| Description = DP protein| Version = NM_001050395.1 GI:115439160 GeneID:4325274| Length = 3521 bp| Definition = Oryza sativa Japon...")
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Gene Name

Os01g0678700

Description

DP protein

Version

NM_001050395.1 GI:115439160 GeneID:4325274

Length

3521 bp

Definition

Oryza sativa Japonica Group Os01g0678700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29680759..29684279

Sequence Coding Region

29681035..29681122,29681203..29681273,29681719..29681814,29681923..29681991,29682077..29682217
,29682296..29682349,29682931..29682974,29683946..29684267

Expression

GEO Profiles:Os01g0678700

Genome Context

<gbrowseImage1> name=NC_008394:29680759..29684279 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29680759..29684279 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcctccctgcggcgatgccgcggcggctgcctccgccgcgcccggcctggccaacctgctcattcgcgaaggcgccggcctcccttcgcgtcccgaacggtacccgccattccggccctgtacttctgattcctttgctccaatctctagggaaggggacgatattcccccccaaaaaaaatcggtttctttacgcagcggcggcggcggcaatgcggcagagagggaggagggcggtgcgaacaggaacgggaagaaggagaagaccggggcgcagaggatcaccgggtgggggctccgtgagttcagcaagatagtttctaagaaagttgaggccaaaggaagaaccacatataatgaggttgccgatgagatttttgcggagctgaagtccattacgcagaacggtctggagtttgatgagaagaatattaggcggagggtatatgatgctttcaatgtgctcattgcaattcgtgttattgcaaaagataaaaaggagataaagtggatgggccttactaattatagatacgaaaagatacagaagttggaggaagttcacaaagaactcatcaccaggatcaagaataagaagaagcttctccaggaaattgaaaagcagtttgatgaccttcagaatattacattacgcaaccaggctagtcagaggccagcagaaagtgttaatggcatcctccttccgttcttattgatcaagacatcccgaaaagcaagggtggaaattgagatttcggaagattcgaagtttgcacggttcgacttcaacggtgcaccattcaccatgcatgatgatgtatcaatccttgaagccatcaggcgtaacaaaggaagagctggcctctccattcacccttaa</cdnaseq>

Protein Sequence

<aaseq>MAPPCGDAAAAASAAPGLANLLIREGAGLPSRPERYPPFRPCTS DSFAPISREGDDIPPQKKSVSLRSGGGGNAAEREEGGANRNGKKEKTGAQRITGWGLR EFSKIVSKKVEAKGRTTYNEVADEIFAELKSITQNGLEFDEKNIRRRVYDAFNVLIAI RVIAKDKKEIKWMGLTNYRYEKIQKLEEVHKELITRIKNKKKLLQEIEKQFDDLQNIT LRNQASQRPAESVNGILLPFLLIKTSRKARVEIEISEDSKFARFDFNGAPFTMHDDVS ILEAIRRNKGRAGLSIHP</aaseq>

Gene Sequence

<dnaseqindica>3158..3245#3007..3077#2466..2561#2289..2357#2063..2203#1931..1984#1306..1349#13..334#gctcgagccgcaatggcgcctccctgcggcgatgccgcggcggctgcctccgccgcgcccggcctggccaacctgctcattcgcgaaggcgccggcctcccttcgcgtcccgaacggtacccgccattccggccctgtacttctgattcctttgctccaatctctagggaaggggacgatattcccccccaaaaaaaatcggtttctttacgcagcggcggcggcggcaatgcggcagagagggaggagggcggtgcgaacaggaacgggaagaaggagaagaccggggcgcagaggatcaccgggtgggggctccgtgagttcagcaagataggtcagatgatgcgccatgccgaaaaaagcgattttttttttttactcgtgaacctgatgtggtcaattgagttcatattactacctgtgtgtggatcagggtttaccaaactgccagggccggggttatcgcgccccggcggtaagcacagttactgcgcggtaaccgtgaaaaactgtacaaaaccgtgcaaaattcatcaaaaattcaaattattttttaaatttatttgaatttaaggaggttaccgcggtatttacattaccgtaccccggcggtaagcccggtaaccgcggtaaccgcgcggttaccggcggtatggtgaaccctggtgtggattgctttggtgaggaatctgtacagtactactgtttcacgcacgaaacagattgaacgattcgagcgtttaggatgatgctcttggatttaatgagtgggtttcgtcttgagccataggggagttaacgatgccctgtttggtgtgggggaactcctgcggttttcatttgttgagggatagctctggtgactgttgctatccgtactgttttgaattttagacagtgcaattaggctatacagtgaaggaatgagtgactgtgtctgagtgggcacttgtggaaaacattgtctgttcttgtgtggcttgcattgtttacactactggagcacactgtgtcaccactgatcaacttgatgttatgtcagcattttgattttgagtacaccatgtagatacgatatgcacatctgttgtacagatcatgtttacacgatggtcattacccactgcagttggtctgtaaaattgctaggacatctgaggttgtgtcagtagaaattttgtgagggtgcagatgtgtaataatggatctgttttaccagttaaaagtagatgttttcttgtcatgatgtgaacgaaaatgctgaccttgtatgtgatttcatgagcatttgactttattttgcagtttctaagaaagttgaggccaaaggaagaaccacatataatgaggtattcccatacacatgtatcctgcgctagtaggctgtgatacattagttttggaggttcatggtcagaacattaataaagtctttctgaatttaccgtgctttagattatggttcaaacatccaacgatgaagtctatacaagctcaggagagcttatagtgagcaaagaacaccccaaataggcaaatactgagtgcaaaattgttatcctatcctgttatctaaactatccgaatttcccgcacaaattgcgtggagctgattaaagttgatttgaaagtatacttgtatttgacacaactcttgtctatatttctataaatacaactgtattttgtatacatctatagcaatcaatctacaccattataatatagacccaccatgattaatgatgcaaatctttctactttttcccaatcaaagtggtaatttctatccttgagaggctccttttgcattctctaatatatactagatgccaaaggaagaacatatttatgtttcaaagtgatttatttcctccccctttaacgttgcaaatcacctaattcctcaatctgctattgcctattctaggttgccgatgagatttttgcggagctgaagtccattacgcagaacggtctggaggtttgttcatgctatagctgtctatgcacttacaggaaatacatgatgagctaatacaaaataatgttgtctctgtagtttgatgagaagaatattaggcggagggtatatgatgctttcaatgtgctcattgcaattcgtgttattgcaaaagataaaaaggagataaagtggatgggccttactaattatagatacgaaaagatacagaagttggaggtcagtacttgctcttacttcaaaggttagattaaaactaatcaataggaatatgatttgatttctatcatgttctgttttacaggaagttcacaaagaactcatcaccaggatcaagaataagaagaagcttctccaggaaattgaaaagcaggtaagtttgtttgcaagcatatcaactttttatttgatttcactttcgtagtttaccatgatggtgcagttgattattgcctgatgtttctttcttgtttatttcaagtttgatgaccttcagaatattacattacgcaaccaggctagtcagaggccagcagaaagtgttaatggcatcctccttccgttcttattgatcaaggtagttgttcttgcttggtaacagtggaaaattccttgaatccagccaccttcaactaatccctaccatatggctgtaccttgatttgtcctgtccatatttcaattaactctgtatttcttagatgggctggtttagacattgttttttgttgtttaactagcagttatatagtgaggtacaatcatccatcatagaatgtagattacaggtgctaatgcatactgtgtagtgactacgttagtagatatacatatccttccatgctagggaataggaatgtcttgtacttgcagacttgcagtcttccatatgtaatgttataacaaaatgctagtaattgatacaaaggttgtaagcaaaagaaatcagtgcaggtgagtcatacggtgttggcaagaggggtcaggatagtttattaatcgatttatttatcttcgagcagacatcccgaaaagcaagggtggaaattgagatttcggaagattcgaagtttgcacggttcgacttcaacgggtatgcttttatctgctacctatctctcctacttagctgatttttttcccctaactgaatgcctacaactctcttttcagtgcaccattcaccatgcatgatgatgtatcaatccttgaagccatcaggcgtaacaaaggaagagctggcctctccattcacccttaagaggcacaagaatgtgacaaaaccaattgaagtgtcaaaactcaaaactggcaccaccagtttcttttgcacagttatgtatagctatagcgtacctttcagtatggaaactcgacctagtttataggacagtctctcaggctttttagcagatatgacctgcgaattttgcctcttttttgtgcctagcaggtgagtatggaatagttttttcttgcgtgtgctgctatgtataaactcaattgccgtttcaattcgaagcttgtgtacaagctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0678700, RefSeq:Os01g0678700