Os01g0680700

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Revision as of 04:53, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0680700| Description = Protein of unknown function DUF1639 family protein| Version = NM_001050410.1 GI:115439190 GeneID:4324389| Length = 5...")
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Gene Name

Os01g0680700

Description

Protein of unknown function DUF1639 family protein

Version

NM_001050410.1 GI:115439190 GeneID:4324389

Length

5130 bp

Definition

Oryza sativa Japonica Group Os01g0680700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29772130..29777259

Sequence Coding Region

29772664..29772714,29773886..29773963,29774081..29774390,29775501..29776121,29776927..29777021

Expression

GEO Profiles:Os01g0680700

Genome Context

<gbrowseImage1> name=NC_008394:29772130..29777259 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29772130..29777259 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtggctccctggaggtccacgcgattggcagacacgccgcgtcgccgtgcgccctgagactgaaagccctcccggcattggacatgatgaggtaccaaaggcttagcccggactgcctcccgctagccaacggcggcggcggaggaagcggtagcgtgacacggaagccggcgtcgagatcctgcaaggacgacgatggcggcatggccgtcgccgcggacagctcccgcctctcgtcgtacctcccgtcgtcacagctcgattccaagccgctgcgcgctcgggcgccgcagccgtcgtcctcgtcggccgccgcctggagcccggcgcgcgaccacgcgcacgcccaccacaaccaccaccaccaccaccacccgtccgactcctccgacacggcctcgccgagctccaacggcgcgggcaccggtggcgacgtgctgctgcagtgggggcacaacaagcggtcccgctgccggcgcgacgcgtcctcctcggccaacgcggctccctcctcctcgcagcgccgccagaccgcctccgccgccggcaagatcctgcgccgctcgtcggcgccggcggagaagctcatgccgccgccgcccccatccaccaccaccgggtcgtacacgcgcgggtccaacctgaggtccgcttcgtccttcccgacgcggtccgccgccgccgccgccgtcggagacgcacaccaccacaggtccgccgtggaggagcgatcaggcggcgggtacaagcggtcgccggacaaggcgcacaagtccgccctggacgcggcgctgcacatggattccaagaacaaccaccatcaccaccaccacgactcgtcggtgaccgcaaacggcggcgccggcgccggcgagaagatcggctccgagcggtttgagctgccccggatctacatctcgctgtcgcgcaaggagaaggaggacgacttcttgatcatgaagggcaccaagctgcctcagaggcccaagaagagggccaagaacgtggacaagaccctccaatatgtattccctgggatgtggctttcagacttgacgagaggacggtatgaggtgcgagagaagaaatgtgtgaagaagaggcgtagagggctgaaagggatggagagcatggacagtgactcggagtga</cdnaseq>

Protein Sequence

<aaseq>MRGSLEVHAIGRHAASPCALRLKALPALDMMRYQRLSPDCLPLA NGGGGGSGSVTRKPASRSCKDDDGGMAVAADSSRLSSYLPSSQLDSKPLRARAPQPSS SSAAAWSPARDHAHAHHNHHHHHHPSDSSDTASPSSNGAGTGGDVLLQWGHNKRSRCR RDASSSANAAPSSSQRRQTASAAGKILRRSSAPAEKLMPPPPPSTTTGSYTRGSNLRS ASSFPTRSAAAAAVGDAHHHRSAVEERSGGGYKRSPDKAHKSALDAALHMDSKNNHHH HHHDSSVTANGGAGAGEKIGSERFELPRIYISLSRKEKEDDFLIMKGTKLPQRPKKRA KNVDKTLQYVFPGMWLSDLTRGRYEVREKKCVKKRRRGLKGMESMDSDSE</aaseq>

Gene Sequence

<dnaseqindica>4546..4596#3297..3374#2870..3179#1139..1759#239..333#atcgccattgctgccctcctctccgtcttcctcctccctcctctgtcgcctgttcttcttcttctcacgatttttttcccctgtaaatttcccggcggcttctcgcatctcgttcatcgtcgtcgtctgctcgcgacttgacggacgaggaggaggaagaagggagcgattggtttggacggtaagaaagggagggacgcgcgggcggccggagccggtggccgacggccattttttcatgcgtggctccctggaggtccacgcgattggcagacacgccgcgtcgccgtgcgccctgagactgaaagccctcccggcattggacatgatgaggtagacggcagatctccaggccctcgagcctctcgtccttgttcggttgttcctgcggttcctcgtttcttgctctcttctgtgtcagatcgctatgttgtttctatggttcgcgttcggttttgttttcctctttcggttttttgttcggctggtgaagcgatttggttgatttgcttgcctgccggccggtgatggccggcctccttgtcgaattgctgtcctttgtgattctacttgttaatctgtctgatggttttgttctgttcgtttgatttttggatttcatggtgttgctgctgttgcggttcgattgatctctacttgactgtttctatgccggtttcgctaattcgcgtggaattcgtgcgtctcgttttgacccgatttcattctctccgtatttcgcagtcttctgctcataatctcagtataatcgtcttttgcttttcttggttcctctctggctgttttagagtctgggtacaaaagcatcggatcgtttggtcgttttgcaaccatgggtactctttctgggatgatgagagccatagttcatgtcagtttgttcatgttctttgtggccgtgttccctttcaagaactggttggtttgttgtcaaattttcggtcattttggtgcctcctgttcaaccctgcttctgttgcatctgcagagttcgatctgttcgttttatttccattccatgtgatggtctgagaaggcccgatttgcgactcgcattttgtagcagatctctttcctccgatcaaatcgctaatcggcgcgttttgattcactgcaggtaccaaaggcttagcccggactgcctcccgctagccaacggcggcggcggaggaagcggtagcgtgacacggaagccggcgtcgagatcctgcaaggacgacgatggcggcatggccgtcgccgcggacagctcccgcctctcgtcgtacctcccgtcgtcacagctcgattccaagccgctgcgcgctcgggcgccgcagccgtcgtcctcgtcggccgccgcctggagcccggcgcgcgaccacgcgcacgcccaccacaaccaccaccaccaccaccacccgtccgactcctccgacacggcctcgccgagctccaacggcgcgggcaccggtggcgacgtgctgctgcagtgggggcacaacaagcggtcccgctgccggcgcgacgcgtcctcctcggccaacgcggctccctcctcctcgcagcgccgccagaccgcctccgccgccggcaagatcctgcgccgctcgtcggcgccggcggagaagctcatgccgccgccgcccccatccaccaccaccgggtcgtacacgcgcgggtccaacctgaggtccgcttcgtccttcccgacgcggtccgccgccgccgccgccgtcggagacgcacaccaccacaggtaacacacgcctcctacctcctcctctccgtctcgtctcatatcgatgtcgtggggaagatgacgtccttcctttttcctcgcctgcatttcgctcggcgactttttttctgtttccgcttttgcccctccgcggaaactaccgggccgcgcgctctcatattcctcgttggagtcgtggtggctcttgcgtttgttttgttttgttgggttcgtgagttcgtgtcttcgccgcgttatttattcgcttcgggtttttttttgggtcttcgggtttgggtctcttttgtttctgagctgtaccgctccgtagagagaagggtgggttgagtttgataaaagattcttttctcctttttacttcacacacttttgtttctattaaaaaattggagcaggttctcacctgatctagatctcttcgtctctccccgaattttcgtggtatttataacccttttaatttttatttacaatatttttcggaggatgttgtgtgtccggatctggtgtgtggtacattgaggtggtaactttaccttcctcttccttgactaatctgtaacccaagtcgtaaggtcataggcagcagcacccgtatttgtcacacgttgcatgatgcatggggacccccatcgagatctccatatctcgctgaaattcgttgatggtcatggtggtactccttggttagggcagctttaatttgggaggatcgtttggtcgatctggttaatttggggtgttgggatgatgatgatcatcatcatatgaatttgcagcatcaagaggagggagagcttgtagtactgcttgtagggtagatggttataaatatatccacatcacagctcccctctcttttctttctgggcatcaacaatagtagtatagcttttgctcatagtgcatccatcttgttgtggtaggagtctccagcagaccagttgtactactagtgagtaaccaatccaccctacccaccccttcttcccctttaccctttctctcaacctcccaaccacctccaagtccatcatcaccaccactagcacctgcaacaatccccatgattaacgtcttgttttctttctctggtggtatgatcaggtccgccgtggaggagcgatcaggcggcgggtacaagcggtcgccggacaaggcgcacaagtccgccctggacgcggcgctgcacatggattccaagaacaaccaccatcaccaccaccacgactcgtcggtgaccgcaaacggcggcgccggcgccggcgagaagatcggctccgagcggtttgagctgccccggatctacatctcgctgtcgcgcaaggagaaggaggacgacttcttgatcatgaagggcaccaagctgcctcagaggcccaagaagagggccaagaacgtggacaagaccctccaagtatgccaatctttgctccgcaaaccggcctgatcttatctgctccgatccattcttgcatctgttctgatcacagagctaacatgtgtctcgtgttgcccccgatgtgatgtgcagtatgtattccctgggatgtggctttcagacttgacgagaggacggtatgaggtgcgagagaagaaatgtgtgaagaaggtatactccactctgcacctggcattttcagttcatgcattctgtgtatttttacagacaagaagaggaaaattacctagatttagggcatcagtgacccagattggttgggtctaatgcaaaaataaagccgaagagtaggtgaattacttgcccttttcttttagtttggccccttctccctcacatggggcccatgactcgtgatgctccgtgtcctcattgatgacggcacggcactgatttatttggctcagctttattgctgtggacgtggagatgcaagcgaacgatcattctattgcccttacctaaaggagtcttcttgttctacgtttagttggatccattcgttcatctttctacatttgtcatgtgctttcccaggcaaatctcattcaagaacactacagtcacaactcacaacaaaccagagtgtgccacatgtcatagcagaaagaacaaaaaaaagtcttggcctctttcagtatggggcccagctgtcagcctcttatcgtccttagctaagcatgagaaagaactgtagcattattactacttaggtggtgttagttcagtgcttagctgcgggtgcgagattgttgacaacttgattattccggaccttgaaggcttgaatgcaagtcgtcgtcgctgacaagtagggaagggccaacgtggagacatgtatctgtgtcttttgttaggaccacatgataatgtctggatagagcttggaatcataaccatcgaaaaagagaagaaaaagaaatggtacaaagggttggaaaagaaattgtggtgctgtcttttgatctactagtctgtttttcaccttttccgtgatagggtcttcaactcattccctttgttattaggagcattcaagcatgctgtagtttaatgagctcctgtaacatactaacatgcatatattttccaatagtaacaaggccagctcgaatcttgtaacatgaactctactagtattgtttagctgactggcagctattaaaaacccctgatggttaggttgtgcttgaggggtgctagattctccacaagaattaggctcagcacatgcacctaatcacctagtagtatctccatccatcaaggtttctgcttaatctcgggcactaaccgaaaactcctgtttctgactatgcagaggcgtagagggctgaaagggatggagagcatggacagtgactcggagtgacggcagctggaggtcaagcgaggcacccaaagcgaaaggagcaataagattggagtggatggagattgggccattgcaatcaaagtggatggggggagaagaagtaagggcaagccaaagggaaggcgaaggcgaagagtgttttttgtgtaaatggagaggaaaaagaagaggaggatgtgccgagggcaggaggtgcacgcgtaacgcgtttgcctcacacaccctcctcgaggcgcccggcccagcggaagtggtggcttgagacgacgacgacgactatgccccggggtgaatttttttcgtttctttcgggttttgtcagagccggccacctgctcgcacgtcgtcgcagcggcgcacaacttggtgccgcgtttttctccccgcgagaggccattttgtggtgtaattttttgggtgggctccgttggcccggccggcctcgccttcctgtgagcttttgcggtttggtttggttggaatggttacccggtgactcttgtgcatagttctttactattagtactagta</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0680700, RefSeq:Os01g0680700