Os01g0685200

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0685200| Description = Anti-silencing protein, ASF1-like family protein| Version = NM_001050430.2 GI:297597385 GeneID:4324146| Length = 335...")
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Gene Name

Os01g0685200

Description

Anti-silencing protein, ASF1-like family protein

Version

NM_001050430.2 GI:297597385 GeneID:4324146

Length

3354 bp

Definition

Oryza sativa Japonica Group Os01g0685200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:29998752..30002105

Sequence Coding Region

29998823..29999185

Expression

GEO Profiles:Os01g0685200

Genome Context

<gbrowseImage1> name=NC_008394:29998752..30002105 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:29998752..30002105 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tatgcacatttccgttttcaggctgatcctcctgacccgtcaaagatccgtaaggaagacataattggtgttattgtgctgctattaacttgttcctacatgggtcaagagttcatcagagtaggttactatgtgaacaatgacaacgatgatgagcagcttcgggaggagcctcctgcgaagctgctgattgaccgggtgcagaggaacatattggcagacaagcccagcgtcaccaagttccccatcaatttccatcctgaaaccagtgcaggcgcaggacaagagcagcagcagcaacagcaatctggttcacctgaaaatcacccaaaccaaggtagcaagcccaaccctgatcaatga</cdnaseq>

Protein Sequence

<aaseq>YAHFRFQADPPDPSKIRKEDIIGVIVLLLTCSYMGQEFIRVGYY VNNDNDDEQLREEPPAKLLIDRVQRNILADKPSVTKFPINFHPETSAGAGQEQQQQQQ SGSPENHPNQGSKPNPDQ</aaseq>

Gene Sequence

<dnaseqindica>2921..3283#ggagccaagctgtgcggccacccgcccaggcggcccggccgccctgccaacctcctccatcgcttgatcaccatcaccaccccgcacctcatcgccgccgtctcaccccgccctccccaaccgccgtccggtcagcgcaaccgaccactcccaccagccacggcggcgaagcggaggcggggaagtagtagaagaagatgagcgtgatcgacatcctgacgcgggtggacgccatctgccagaagtacggcaggtacgacgccgagaagctccacggctccggcgtcgccggcgaggaccccttcgcgcgcctctacgcctcggtcgacgctgacctcaacgaatgcctcgaggtattgcactgttgccgcctgattgcctcccttcctctctctctctctcgcattctgccgcaggcccgcagcgggtgtgatctgatcttgatctgatcgggtattcgggtgtcgctgcagaaagcggaggcggcgaagcaggagaagaaccgcgccacggtggtcgcgctgaacgcggagatccgcggaacgaaggccaagctcctcgaggaggatctgcccaagctgcagcggctcgccctgaagaaggttattgatgcttctctagtcctctctcctctgttgctctgcatagctagtcggtacgtagatatgcaaggtggttggtgcgaggagcttgttcctgcttgcactgtgcttcagagatgtgaccttagtagctttctgggatgatcacaagagtgacgatttctaaatttagcatatggcattaatcgatgattgaacgcaaactgattgctgtgccaggagagtgattcttatgctttgttttcaaatgtttgctgagctctagtcgatttttttctgatggaaacaacaagttgtattttttttaaaaaatgtggggaagtataattgatttggagcaggtccaactagaacatttgcaatgcaggttacattgtctggaaacatgtattctttgggtgcgtaaattaatttaggagttttatgcgctttctcagggcagttcttctacaaagtaggccatgctattaagtattgttgatttggtgaatgtgcacagtcgtgcagaccctgtttggagcaggaactccatagggattttgtaggaattgaattgaccattcttaatggatgtcatgctgtctatgcttttacgtagttcgtaatggcaatgcattaagaaaaatgcatgtctctggtcgtggatctatgttttgatttgcgaggttgagatatatccgatagctcttaatgtagaagtagaactagaacaaagttgattcctaagttcttctcttgaacatttgggacatttaagtttgagtactcaagctgactgttgatgactcctaatttaccctgtggaaattcttctagattctttggtaccatgtgatgtaggcaatgcattataagaaggatatctatatgtcattttgttagaaggaaaaaaggaacaaatgcatagcacaggagctgtgttgtttattgagtcggtaggtgactaggtgcttgtactttatagaactttcctcggcataacaatattggacaattaccttcatacatatcttttgtttaaagaactcagacatgtattcaaggtgttcctggtgcacgtccaagttttatttcagcaaggctttaacccgaatggactgttcaatttggttgatttagtattgctctaagattttccttgaaacaaaatactagttctaaagatttttctatgccaatgccaggttaaagggctttcaaaagaagaacttgcaatccgtggtgatctggttactgccttacctgataggattcagtcaataccagatggaagtgctacatcatcaaagaaaactggattatggggatcttctggatctcgtgcaggaacagggattaagtttgactcaacatatggttagtaaccatcgttccaatttatcttgtaaatattccatctgcttggtgttgttacatcagcatccatcagttttgttacccccttttgaaacaacttgccaatttaacatggttgtttcatattgagaaaaaggatgatattactgtaatttaccacctttcgttttttcagatattttattttcctcttttttttgttgtctagtgcttattcggagatatgtgcaaacattctggatgatattccactgaaaattgacttatctatgaatatgctggctataaatagctgataacaccattatatttgttcagttttgtaccagtaaaaaataagtctcttctatacatgtgttatttaggaatctgttctgcaccttagtctacgcaataaatcctctcttacattttttttatcctggtcatgactcgtaatttaatcttgatgttgagaggtgcctgcagtgatttattatgctttcattgatgtgcgctgcttatcatctgttctcacgcatctgaactctgaagtattttcatcctacagaactccaaacacatgtagtagtgctgatttatcttcctgcattagtcacgagtattgttcatttttgtggattagttctatgaagtagtactaagtgactttctttcagatctggagtggaagcttatatatgttggatcggctgaggatgaaaattatgatcagctgcttgagagtgtgcttgttggccctgtgaatgttgggacataccgttttgttctccaggtaaataagtatattttagtggcaaaccgagtacaagatctgcatcatgaactcagagactagtgttgaacttgaatctgatatggcatttcagtttctcagctgtgcagagacctgtgctcattttgcactggacctgctgcatttttgctgctatcttggatgtatgtctgaatcatgagaatgatatgcacatttccgttttcaggctgatcctcctgacccgtcaaagatccgtaaggaagacataattggtgttattgtgctgctattaacttgttcctacatgggtcaagagttcatcagagtaggttactatgtgaacaatgacaacgatgatgagcagcttcgggaggagcctcctgcgaagctgctgattgaccgggtgcagaggaacatattggcagacaagcccagcgtcaccaagttccccatcaatttccatcctgaaaccagtgcaggcgcaggacaagagcagcagcagcaacagcaatctggttcacctgaaaatcacccaaaccaaggtagcaagcccaaccctgatcaatgaagtgctagtcccgctacccgcataaaaacccgcttgttagtgtattttccacatggtaatacaaaatttag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0685200, RefSeq:Os01g0685200