Os01g0687300

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0687300| Description = Conserved hypothetical protein| Version = NM_001050446.1 GI:115439262 GeneID:4324116| Length = 5041 bp| Definition ...")
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Gene Name

Os01g0687300

Description

Conserved hypothetical protein

Version

NM_001050446.1 GI:115439262 GeneID:4324116

Length

5041 bp

Definition

Oryza sativa Japonica Group Os01g0687300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30101688..30106728

Sequence Coding Region

30103564..30105100,30105362..30105387,30105856..30106587

Expression

GEO Profiles:Os01g0687300

Genome Context

<gbrowseImage1> name=NC_008394:30101688..30106728 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30101688..30106728 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccagagtcttctaccaacagattttgtaagaaggtagatttagaagttctgccaagcagaagtgacgttggagaatcatcttaccacaagcactccctatggatggcacattgggccagatcaagcatcagtccagaacctcaaaatggccagagctgtagcccacttaaggaaattgatgatgttggctattcaaaagattgcggggctttaccttttgagctcatgaaagctagagtagctgaaaggttgatggtgggagtgagccatggaggtgtctctgcaggaaatactcggcaattcagtactaatatgaggggtgtagcacgtgatgtttgccaagaagttcaatgcaagaatgttgatcagatgggtagctcctttgaaagttctgtgatgcagaaaaatgtgaacttatatgctgctaagacggtggtatctgaaagatattctgttcataagatatctgatatattggtggattctcgtaaactttgtggcactgaaaatctgagttcagagtggaatcactttccaatgtttgaaatcaacaggaaaatcgacagtattcttaacccaaggcggtctgcgttggtcacatcatctgaaaagatttttgtaccacaaaaatcagtgaagataaatatgtctacgtctaatgtgatgtcattttcatcaaaggaatatcagctgcacacacatcaggtaactgatgagaataggcaatgcaaatctgcaaggggcatgctatctcatcttgataattacactggcctcaattctgaccatgcagggaaaaagctgaaaggccatttatcaattgaagaaccatgctcttgcagcaaggatgacactgactcatcatgttcattagcagacgagcaccatgctcgccattatatcccaaattcaaagaagtcacctcatcggtcttgcaagaacagttctgtgtattcagcgagcaaaatggaaaatcaatttgttgaaggttctttgttggaacataaatcagaagtgtatggagcatgcaaaaagaaacagcatttagagggagttgctttccatgagtctgcactgcatagagaatatcaaatcaagtcagttaaaactactgccattaccaacgagggtgatatggacactaatggccatcatgtggactttggtaatttgttacaaagtgatcagcagtatctgaataaacacacagaagattctgcagtgaatttgacagaatcctgcaagacacctgatgcaattgatagtgcaatgatactgaagagcaaggacgaatccctggcccaagaaaagagaacaaacaacaaattgatagataacaaacggaagggtccctgcttatttgaaatgtttacacagcctacgaaatcaaatgtcaaatgttccatagatcgaacatcttcagggaaatcttgtggtaacatgaccagtggtttattgggagcacagaaacagttttcaactaaaactgataccttttacagtgaagctcaccatgcatcaaaatctacagcaggatttgcttcagcatcaatgcaaaaggacttgggttatccatcctctgcaaaaactgaacagttagtgacttcatcagttaaaggagtatcaagcggcagtaaaggaaatgaagcagtcaacacgagtgcagaacaccgcgacttctatccaaaagcaacttgtgccaacaatcaagaatggagcatgtcaaagacatcaagcatgaacttagatttagttcttttccaaataagcagactgaaaaatccaattcctaatgctttaaatgagtcgccagcatgtccagatccaagtgagaagtggctgaaacgcctgcaacatgatacctcagactctcatgttccttgttccaagaaaccaaaggttggagatggtccattggctggaggaacatgtactgtgtttggtcaagtgtttgactgtgacagcgacagtactggcatgatcaaccatgtgaagaacaaattaatatgtaaaggactcactgatcaacaaagccaagaaggttctcctatgtcagcaaaaagtcttaatcgttggataggaagatggtgcagaggaggcacccctgtttttcatggaacttcaaatctagaaagacaggaagccaagtctggcatgccatcggatgatcttgaaggtcagtttccaagcatcgcagcaatggcgatgatggggcgtgtaatgaacaagctccggccatgtgaacttcagaagaggggtccctctgtagtctggaggacagaggggctgtga</cdnaseq>

Protein Sequence

<aaseq>MPESSTNRFCKKVDLEVLPSRSDVGESSYHKHSLWMAHWARSSI SPEPQNGQSCSPLKEIDDVGYSKDCGALPFELMKARVAERLMVGVSHGGVSAGNTRQF STNMRGVARDVCQEVQCKNVDQMGSSFESSVMQKNVNLYAAKTVVSERYSVHKISDIL VDSRKLCGTENLSSEWNHFPMFEINRKIDSILNPRRSALVTSSEKIFVPQKSVKINMS TSNVMSFSSKEYQLHTHQVTDENRQCKSARGMLSHLDNYTGLNSDHAGKKLKGHLSIE EPCSCSKDDTDSSCSLADEHHARHYIPNSKKSPHRSCKNSSVYSASKMENQFVEGSLL EHKSEVYGACKKKQHLEGVAFHESALHREYQIKSVKTTAITNEGDMDTNGHHVDFGNL LQSDQQYLNKHTEDSAVNLTESCKTPDAIDSAMILKSKDESLAQEKRTNNKLIDNKRK GPCLFEMFTQPTKSNVKCSIDRTSSGKSCGNMTSGLLGAQKQFSTKTDTFYSEAHHAS KSTAGFASASMQKDLGYPSSAKTEQLVTSSVKGVSSGSKGNEAVNTSAEHRDFYPKAT CANNQEWSMSKTSSMNLDLVLFQISRLKNPIPNALNESPACPDPSEKWLKRLQHDTSD SHVPCSKKPKVGDGPLAGGTCTVFGQVFDCDSDSTGMINHVKNKLICKGLTDQQSQEG SPMSAKSLNRWIGRWCRGGTPVFHGTSNLERQEAKSGMPSDDLEGQFPSIAAMAMMGR VMNKLRPCELQKRGPSVVWRTEGL</aaseq>

Gene Sequence

<dnaseqindica>1877..3413#3675..3700#4169..4900#gcgaccgccgcgccacacgacggacgacgacgcggccgtgttcgcgccagccaagcgtacccctacctgcgaatggttgggtagcgacgagccagccagccagccagccgacgaggagggaatcgacgccccaattcaattcgcgcgaggcgaccgcggcggggcggcttgcgcccacacgtttctcccctcttgctcactttttattccgcgggaagagagggatagattcagctgggctggtggtgattgggacggcgctggtgtgtgtgtgtgagaaaggagtggggctgagctctccgaccccgctcttggctgtggagcgagctgctgctgctgctgctggtgctgggcgggcgctgcggacttgcccttttttattgtgtctttctctgctctggaccaggaggaggtagcggcgagagaaaggccttgcttggttggttttttgctgcctgttcttgggttggtctgctctcgccgtgtttggtggttgttgctccgcggtggagacgctcggatctgaattttggcggcgggcgcgcggcgaaggaggcgaggggtttctcaggtaattgaaatgttccctgctggttgttgcttgtgcacttgtgctgatttgctatcctactttgtggtaatataactggtaattgaaaagtcccctgttttggggtggttgtagactttaccataagcttgatggatcatcttagctttttaagatggcacggaaaatatctttctttttgttgcgatttccctgcttcacgcaactaggaaagatttttctagtttctcctcccattctaaagatttcttgttgagcggcaagaaggtgtttcttgatcatttccgtcattttggccccgcgagaaaaaaatcatttatgtccttttgttcatggagcaattatggatagatcacgtcaggaggaagtatcaaggtgaagaaatagataaccaaaagataaaatctgtagagtttaccgttcactgtgtggtagcataacagaagttgggcaataagttgatcatggatgcaggctgcctcgcaagtcgcaagtaatagcaagcacctctatcggatttcattcatattcttttggaatgtcgtgaaaagttctgtcatgtcttgctggcgacaagtcttcggtggaattaggcaagtagctgattgtactctatgatttacctagtcatttgttttttttttacttaagctggtagaacacctttcagcatcttttttttaaacgaatgggcgagccgtcaatttcattgaatagagaaggagtaaaactgtacagtgtaaaaggcaaaacaggaccaaaggtcctaacaaactatgttacaagccaatttcccagacttcttcgtgttttgacagtacattctttttttttcgtgttttgggagtaaaatatttgtacttgcattttctgtattagttagtgtcaacttctatttactccctatgttccatattgatattgcaaagtgattaagttttgttctaagttaaacttctctaattttgaccaaatttataaaaatatgcaccaatatctaaaacatcaaattaattttattaaaattcactgcgaaatatgtcttgacagtggatttgtttggtattctagatgttaactatttttctgtttgtttagaaatcagtttactatgtactgtactgttaggcggtctcaataggttagatttgtctcttcatagtatgtactgttgcgatactccacccctctattaactagtttcactgggcataattgttctttattgcattccacaaattaaatttcatttctaacaattgttttctttttgcagaatcttaagccaaatctttgaagccgataatgccagagtcttctaccaacagattttgtaagaaggtagatttagaagttctgccaagcagaagtgacgttggagaatcatcttaccacaagcactccctatggatggcacattgggccagatcaagcatcagtccagaacctcaaaatggccagagctgtagcccacttaaggaaattgatgatgttggctattcaaaagattgcggggctttaccttttgagctcatgaaagctagagtagctgaaaggttgatggtgggagtgagccatggaggtgtctctgcaggaaatactcggcaattcagtactaatatgaggggtgtagcacgtgatgtttgccaagaagttcaatgcaagaatgttgatcagatgggtagctcctttgaaagttctgtgatgcagaaaaatgtgaacttatatgctgctaagacggtggtatctgaaagatattctgttcataagatatctgatatattggtggattctcgtaaactttgtggcactgaaaatctgagttcagagtggaatcactttccaatgtttgaaatcaacaggaaaatcgacagtattcttaacccaaggcggtctgcgttggtcacatcatctgaaaagatttttgtaccacaaaaatcagtgaagataaatatgtctacgtctaatgtgatgtcattttcatcaaaggaatatcagctgcacacacatcaggtaactgatgagaataggcaatgcaaatctgcaaggggcatgctatctcatcttgataattacactggcctcaattctgaccatgcagggaaaaagctgaaaggccatttatcaattgaagaaccatgctcttgcagcaaggatgacactgactcatcatgttcattagcagacgagcaccatgctcgccattatatcccaaattcaaagaagtcacctcatcggtcttgcaagaacagttctgtgtattcagcgagcaaaatggaaaatcaatttgttgaaggttctttgttggaacataaatcagaagtgtatggagcatgcaaaaagaaacagcatttagagggagttgctttccatgagtctgcactgcatagagaatatcaaatcaagtcagttaaaactactgccattaccaacgagggtgatatggacactaatggccatcatgtggactttggtaatttgttacaaagtgatcagcagtatctgaataaacacacagaagattctgcagtgaatttgacagaatcctgcaagacacctgatgcaattgatagtgcaatgatactgaagagcaaggacgaatccctggcccaagaaaagagaacaaacaacaaattgatagataacaaacggaagggtccctgcttatttgaaatgtttacacagcctacgaaatcaaatgtcaaatgttccatagatcgaacatcttcagggaaatcttgtggtaacatgaccagtggtttattgggagcacagaaacagttttcaactaaaactgataccttttacagtgaagctcaccatgcatcaaaatctacagcaggtgagacttgctattatacaatttagtctcagttaagacttttttttttggaaagtcttagttaagactttgagcccccccccccccccccagggcgcacatgggtggtgaaaaagccaaaaactattttctccaggctatttttgtgtcacatgttgctacttgttaatgtcaaaatgcagtttaattcaaatgaagaatatattgtaacagctttaatcaaatattaaatgatatgattgttatgttttctttttgtaggatttgcttcagcatcaatgcaaaaggtattagcactccacaagtccacattacattttgtatcagcttagtttatgcaactataaacaagttcaggcaatcagtgaaaaatatcatgtgggaaagcatgaaatattttaaaatccatgaagagaatgtgtcttactttgtatgtgcctgcaacataaatcaacattccaatgtctaccttcaagaatacaactcaatttgcttagtcgcaagttaatcagcttattccatttcagagtttaaaagcattgcaggctcacaagtgtgttgcctttatggatgttgcagtttcttattatgaaataacctaaagtcctaaaatacatcgataagatcacaaagccagttatactctccaacggttttgtcagaatctgaacatatgtagatgtgttgatgcgcaacatatcctaaactttatactcttttttatatgttatcaatatgtaacaatttttccacaggacttgggttatccatcctctgcaaaaactgaacagttagtgacttcatcagttaaaggagtatcaagcggcagtaaaggaaatgaagcagtcaacacgagtgcagaacaccgcgacttctatccaaaagcaacttgtgccaacaatcaagaatggagcatgtcaaagacatcaagcatgaacttagatttagttcttttccaaataagcagactgaaaaatccaattcctaatgctttaaatgagtcgccagcatgtccagatccaagtgagaagtggctgaaacgcctgcaacatgatacctcagactctcatgttccttgttccaagaaaccaaaggttggagatggtccattggctggaggaacatgtactgtgtttggtcaagtgtttgactgtgacagcgacagtactggcatgatcaaccatgtgaagaacaaattaatatgtaaaggactcactgatcaacaaagccaagaaggttctcctatgtcagcaaaaagtcttaatcgttggataggaagatggtgcagaggaggcacccctgtttttcatggaacttcaaatctagaaagacaggaagccaagtctggcatgccatcggatgatcttgaaggtcagtttccaagcatcgcagcaatggcgatgatggggcgtgtaatgaacaagctccggccatgtgaacttcagaagaggggtccctctgtagtctggaggacagaggggctgtgaaaattgcatggtgcatgttttgccggccatcagctatcatgtaaaaaagtcttcaaattctgcaggtaggggatactttagtaaacgcaacgtgtgattatgatttttcaaaagagaaagtatgcgtggtttttttatcaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0687300, RefSeq:Os01g0687300