Os01g0691000

From RiceWiki
Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0691000| Description = Similar to Acidic endochitinase SE2 precursor (EC 3.2.1.14)| Version = NM_001050466.1 GI:115439302 GeneID:4325635| L...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0691000

Description

Similar to Acidic endochitinase SE2 precursor (EC 3.2.1.14)

Version

NM_001050466.1 GI:115439302 GeneID:4325635

Length

1677 bp

Definition

Oryza sativa Japonica Group Os01g0691000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30290666..30292342

Sequence Coding Region

30291001..30291952,30292092..30292216

Expression

GEO Profiles:Os01g0691000

Genome Context

<gbrowseImage1> name=NC_008394:30290666..30292342 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30290666..30292342 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtccggcaagctctgcttcttggcgtccgtgctcttgtcgatgtccaccgtcgtcgacctagcgatggcggcatcgggcggagtcaacatcgccgtctactggggccagaacggcagcgagggcacgctcggggagacatgcggcaccggcctctacgcgtacgtcaacctcgccttcctctccacgttcggcgccggccgcgccccggtcctcaacctggccgaccactgcgacgccccgtcggggacctgcgcgtccctcgccgccgacatcgcgtcctgccaggccgccggagtcaaggtgctcctcagcatcggcggcggcgcgcttgggtacaacctgtcgtcgccctccgacgcgcgggacctggccgcgtacctctgggacaacttcctcggcggcggcgccaccggcgcgtcccgcccgctcggcgacgccgtgctcgacggcgtcgatttcgacatagagtccccctccaggttctacgacgacctcgccaggaacctggcgtcgctgtacacaagggcgccgcggccgccgcgcgggggcaagacgtacctgctcaccgccgcgccgcagtgcccgtacccggacgcgtccctcgccgcggcgctcgccacggggctgttcgaccacgtgtgggtgcagttctacaacaacccgccgtgccagtacgccgcgccaggggacgcgagcgcgctgcggagcgcgtgggcgcagtggacggccggcttgccggcggcgaccgtgttcctggggctgccggcgtcgctggatgccgcggacagcgggttcgtcgacgcggacacgctcgcgtcgcaggtgctgccggtggtggaaggcgcggccaactacggcgggatcatgctgtggagccgctcctacgacaaggactccagcttcagtgtgaagctgcaggccgccttgcagaacaggaacaagccaactggagccggcgcatcctcacataccaagaggagaatatgtaagtggttaacttttgtctattctgaatttctgatccagtatgtagtgctgcactattatcccagccagttgcaattttacaattga</cdnaseq>

Protein Sequence

<aaseq>MSGKLCFLASVLLSMSTVVDLAMAASGGVNIAVYWGQNGSEGTL GETCGTGLYAYVNLAFLSTFGAGRAPVLNLADHCDAPSGTCASLAADIASCQAAGVKV LLSIGGGALGYNLSSPSDARDLAAYLWDNFLGGGATGASRPLGDAVLDGVDFDIESPS RFYDDLARNLASLYTRAPRPPRGGKTYLLTAAPQCPYPDASLAAALATGLFDHVWVQF YNNPPCQYAAPGDASALRSAWAQWTAGLPAATVFLGLPASLDAADSGFVDADTLASQV LPVVEGAANYGGIMLWSRSYDKDSSFSVKLQAALQNRNKPTGAGASSHTKRRICKWLT FVYSEFLIQYVVLHYYPSQLQFYN</aaseq>

Gene Sequence

<dnaseqindica>336..1287#1427..1551#taattcatacaataattgtttactatactattaatatatggtcccacctgtcatacacacattgcgttttagagtccgtgctacagctggctacagatctataacccgctgcttttctctcttatcttttacctcattatgctattgtacctgctctaatccatgcacaagagacaacacggccgccttgccatttgcaacgaattccaatttccaactcctcaatatacccattgctagaaaccgcaccatttcctccataaatcaaccaaactatatgtttgcagcacatctgcactttgaacgcaccgcctcggcacctttcggctttcgccatgtccggcaagctctgcttcttggcgtccgtgctcttgtcgatgtccaccgtcgtcgacctagcgatggcggcatcgggcggagtcaacatcgccgtctactggggccagaacggcagcgagggcacgctcggggagacatgcggcaccggcctctacgcgtacgtcaacctcgccttcctctccacgttcggcgccggccgcgccccggtcctcaacctggccgaccactgcgacgccccgtcggggacctgcgcgtccctcgccgccgacatcgcgtcctgccaggccgccggagtcaaggtgctcctcagcatcggcggcggcgcgcttgggtacaacctgtcgtcgccctccgacgcgcgggacctggccgcgtacctctgggacaacttcctcggcggcggcgccaccggcgcgtcccgcccgctcggcgacgccgtgctcgacggcgtcgatttcgacatagagtccccctccaggttctacgacgacctcgccaggaacctggcgtcgctgtacacaagggcgccgcggccgccgcgcgggggcaagacgtacctgctcaccgccgcgccgcagtgcccgtacccggacgcgtccctcgccgcggcgctcgccacggggctgttcgaccacgtgtgggtgcagttctacaacaacccgccgtgccagtacgccgcgccaggggacgcgagcgcgctgcggagcgcgtgggcgcagtggacggccggcttgccggcggcgaccgtgttcctggggctgccggcgtcgctggatgccgcggacagcgggttcgtcgacgcggacacgctcgcgtcgcaggtgctgccggtggtggaaggcgcggccaactacggcgggatcatgctgtggagccgctcctacgacaaggactccagcttcagtgtgaagctgcaggccgccttgcagaacaggaacaagccaactggtatgacactactactactactactactactactactactactactactactactactactactactaatgcgagtagtaatctttgtaggtctctttgacatcaagccaatcacagttctttctctgataaattgcaggagccggcgcatcctcacataccaagaggagaatatgtaagtggttaacttttgtctattctgaatttctgatccagtatgtagtgctgcactattatcccagccagttgcaattttacaattgaaatcgagtgatatatgcattattagcattaggatcccagaatttctctaatctatatgacagactgacactagacttgtaatggaactcaagaaactgtaacatcaaagatttgtgattttttttt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0691000, RefSeq:Os01g0691000