Os01g0693600

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Revision as of 04:54, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0693600| Description = Conserved hypothetical protein| Version = NM_001185586.1 GI:297720306 GeneID:9268626| Length = 3760 bp| Definition ...")
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Gene Name

Os01g0693600

Description

Conserved hypothetical protein

Version

NM_001185586.1 GI:297720306 GeneID:9268626

Length

3760 bp

Definition

Oryza sativa Japonica Group Os01g0693600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:30400745..30404504

Sequence Coding Region

30401041..30401979,30402074..30402622,30402976..30403783,30404144..30404271

Expression

GEO Profiles:Os01g0693600

Genome Context

<gbrowseImage1> name=NC_008394:30400745..30404504 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:30400745..30404504 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaccccaacggcttcgatttcttctcccaagatcccatttcgtccgccgccggcaacatttggtcgtcgcagccgtcggcgtccggcccttcccacggatccgttccccgcgccggcgtggacacgctggacctcaacacccaggcggcgtcgggccaggagttccctcacctccacgagtacggtgccttcctccagggtggcggcgaggaaggagctggccgcggccgaggctccggtctccctcccatccgtgcaccacgctctctgggagtgagggctggtcgagggggcgccgggccatctcgtgctgcaccgcgtgcccgccagctcaacttcggcgcggtaggtggccgtgctggacacggtggaaatggtgggtcgtcgtcgggcatcggcggcggcggccctgggcgaggcagctcctcatcaggggcaacgggtcgccgtcggcagcgcgccatggcaaccaaccgtggccgcgaccgcggacgtgggggccgcggttggcgtgtgccgaggagtgtcggcacccaggaagcacccatcggcgattacgtcgaccttgacgaagaaggtgcatgggacgatgaggtggaggaattaggcagcttcggcggccctccggtgagcattgctgaccgagctaactggactgataggaataatagtattttgttagcattgtgcatagagcaagtaagagcaggccactacaatggtagccaaatgaattctgatggctataatgctatagccgagggctaccatgccaaaactggtttgatgcacagtcgtctgcagctaaagaatcaaattgggattctcaagagcacgtactccttctggcgttacttgcaaacgcacacgggcttaggaagaaaacctgatggaacagtcgatgctgattctgatttctggagtagtcacatagagggcaaaccttacctgaagaaggtgcttaaaggacttccagcaaacttggatcagcttgaggagatgttcagtggcagtactgtcgatggtagcactgcttttgctgccggtgatgatttcggtgaggcacaagaaggggctgaagatgagtgggcagaagaaacagaggagttcctgcaaactcctcagagtacaagtagccagaagagcaagaggtccctcgacagcactaccagcacatgtagcactccagtgaagaaaagcaaaagccccatggttaagtatgtgaaggacatatccatgtcattcaaggaggccatgcaaatcaacagccaggaattgaggaagcgtactattgagaagcaggctgcttcagtgagaaattgtatgaagatggccttcgagtgtggaattgagcaaaccactgagaatatttttgcaatgtccaagatgtttgagaatccctaccaaagggagttcttcgttggactaccaaaccatgagcttaggttcaactacttcagcaaatggagcagggataacaacctgatggatgtggagcaacatggtgatggagagatggccgaagaggaagaggtttttgatgaaggaagcacatcgtcaagtgatgatgagattatttccatgtgccgcaagaatatgaacatggctcaaactatggttgctcaacttgtccctatccttggtatgtactccgagcactactttgtcaaactaccaaaaagagtggctcttgaatcaggtatccaatgggtccagaggactttaacccgagaaaattcatgctataacatgtttagggttgagaggcaactgtttaataggctgcacaatattttggttgagtcttatgggttgcagtccacaacaaaaatgtcatctgtagaagctctagccatttttttgtggattgttggtgcaccacagtcaattagacaggctgatgaccgtttggttagatctttggagacaattagccggacatttaacaaagttttgcgttgtctccttaggttagcacctaacataattagaccaagggaccctgaattttctgagttgcaccctaacttagaaaacccagatttttggccatacttcaacgactgtataggagcaatagatgggacacatgtgaagcttgtggtgccaaagacgaagagaatacaatacttgaataggtacaatgaaacctcacagaatgtattggctgtttgtgattttgacatgaggtttacctttgtgctatcgggatggcctggttcagcacatgatatgagagtgttcaaagatgcaacgacaactcatgctcacaaatttccacatccaccacaagtcgagagagcaaaattagggatagggaatttgctaggtgtgatgcggatgcagattattttccaatgcctacatcacctcactctgactggccagaagatgaacctcttgttgaggatagcaacatga</cdnaseq>

Protein Sequence

<aaseq>MDPNGFDFFSQDPISSAAGNIWSSQPSASGPSHGSVPRAGVDTL DLNTQAASGQEFPHLHEYGAFLQGGGEEGAGRGRGSGLPPIRAPRSLGVRAGRGGAGP SRAAPRARQLNFGAVGGRAGHGGNGGSSSGIGGGGPGRGSSSSGATGRRRQRAMATNR GRDRGRGGRGWRVPRSVGTQEAPIGDYVDLDEEGAWDDEVEELGSFGGPPVSIADRAN WTDRNNSILLALCIEQVRAGHYNGSQMNSDGYNAIAEGYHAKTGLMHSRLQLKNQIGI LKSTYSFWRYLQTHTGLGRKPDGTVDADSDFWSSHIEGKPYLKKVLKGLPANLDQLEE MFSGSTVDGSTAFAAGDDFGEAQEGAEDEWAEETEEFLQTPQSTSSQKSKRSLDSTTS TCSTPVKKSKSPMVKYVKDISMSFKEAMQINSQELRKRTIEKQAASVRNCMKMAFECG IEQTTENIFAMSKMFENPYQREFFVGLPNHELRFNYFSKWSRDNNLMDVEQHGDGEMA EEEEVFDEGSTSSSDDEIISMCRKNMNMAQTMVAQLVPILGMYSEHYFVKLPKRVALE SGIQWVQRTLTRENSCYNMFRVERQLFNRLHNILVESYGLQSTTKMSSVEALAIFLWI VGAPQSIRQADDRLVRSLETISRTFNKVLRCLLRLAPNIIRPRDPEFSELHPNLENPD FWPYFNDCIGAIDGTHVKLVVPKTKRIQYLNRYNETSQNVLAVCDFDMRFTFVLSGWP GSAHDMRVFKDATTTHAHKFPHPPQVERAKLGIGNLLGVMRMQIIFQCLHHLTLTGQK MNLLLRIAT</aaseq>

Gene Sequence

<dnaseqindica>297..1235#1330..1878#2232..3039#3400..3527#gtcgctctcacccctcgctctcgccctcgctcgctctccagaaccctcgccgccgcccagcccagcttcgcctccccctccccccacccgcgccgccgcccggccccagcttcgcctccccctccccccacccgcgccgccgcccggcccttcacccgcgccgccctctccctcgaatcgcgccgcccttccttcagatccaccgagaggcatccacgccggcgactcaccccacccgcgttgccggccatcagatccgtcgtcgacgcatcgccttgcaccggatccgcgcggagatggaccccaacggcttcgatttcttctcccaagatcccatttcgtccgccgccggcaacatttggtcgtcgcagccgtcggcgtccggcccttcccacggatccgttccccgcgccggcgtggacacgctggacctcaacacccaggcggcgtcgggccaggagttccctcacctccacgagtacggtgccttcctccagggtggcggcgaggaaggagctggccgcggccgaggctccggtctccctcccatccgtgcaccacgctctctgggagtgagggctggtcgagggggcgccgggccatctcgtgctgcaccgcgtgcccgccagctcaacttcggcgcggtaggtggccgtgctggacacggtggaaatggtgggtcgtcgtcgggcatcggcggcggcggccctgggcgaggcagctcctcatcaggggcaacgggtcgccgtcggcagcgcgccatggcaaccaaccgtggccgcgaccgcggacgtgggggccgcggttggcgtgtgccgaggagtgtcggcacccaggaagcacccatcggcgattacgtcgaccttgacgaagaaggtgcatgggacgatgaggtggaggaattaggcagcttcggcggccctccggtgagcattgctgaccgagctaactggactgataggaataatagtattttgttagcattgtgcatagagcaagtaagagcaggccactacaatggtagccaaatgaattctgatggctataatgctatagccgagggctaccatgccaaaactggtttgatgcacagtcgtctgcagctaaagaatcaaattgggattctcaagagcacgtactccttctggcgttacttgcaaacgcacacgggcttaggaagaaaacctgatggaacagtcgatgctgattctgatttctggagtagtcacatagaggtacttttctaccattttttttattgctgatcatgtttttttgggttattatctgtctgcgtttagtgttcttatgtttggattattcttgcagggcaaaccttacctgaagaaggtgcttaaaggacttccagcaaacttggatcagcttgaggagatgttcagtggcagtactgtcgatggtagcactgcttttgctgccggtgatgatttcggtgaggcacaagaaggggctgaagatgagtgggcagaagaaacagaggagttcctgcaaactcctcagagtacaagtagccagaagagcaagaggtccctcgacagcactaccagcacatgtagcactccagtgaagaaaagcaaaagccccatggttaagtatgtgaaggacatatccatgtcattcaaggaggccatgcaaatcaacagccaggaattgaggaagcgtactattgagaagcaggctgcttcagtgagaaattgtatgaagatggccttcgagtgtggaattgagcaaaccactgagaatatttttgcaatgtccaagatgtttgagaatccctaccaaagggagttcttcgttggactaccaaaccatgagcttaggttcaactacttcagcaaatggagcagggataacaacctggtttagttaggcacctcttttatgtggtccgtttgttgtgtccaggaaccgtttggagcttttgttatgtgctgttaatttgaacctcctttatcacttttgttatgtgcagttcgactttgcagctgttaatttgatgttatggaagtattatttgggttgtttgtgttgcatcgatgaacttattcacatattttggctactttcaatcatatatgtctgaattcaacctggcatctgtttgtgatgcattcaatcatatatttgtactgcaatgtgccattctgtcattcttttgggctcttatctatttgtgctgcaataatattacctctctgtcatttattggacagatggatgtggagcaacatggtgatggagagatggccgaagaggaagaggtttttgatgaaggaagcacatcgtcaagtgatgatgagattatttccatgtgccgcaagaatatgaacatggctcaaactatggttgctcaacttgtccctatccttggtatgtactccgagcactactttgtcaaactaccaaaaagagtggctcttgaatcaggtatccaatgggtccagaggactttaacccgagaaaattcatgctataacatgtttagggttgagaggcaactgtttaataggctgcacaatattttggttgagtcttatgggttgcagtccacaacaaaaatgtcatctgtagaagctctagccatttttttgtggattgttggtgcaccacagtcaattagacaggctgatgaccgtttggttagatctttggagacaattagccggacatttaacaaagttttgcgttgtctccttaggttagcacctaacataattagaccaagggaccctgaattttctgagttgcaccctaacttagaaaacccagatttttggccatacttcaacgactgtataggagcaatagatgggacacatgtgaagcttgtggtgccaaagacgaagagaatacaatacttgaataggtacaatgaaacctcacagaatgtattggctgtttgtgattttgacatgaggtttacctttgtgctatcgggatggcctggttcagcacatgatatgagagtgttcaaagatgcaacgacaactcatgctcacaaatttccacatccaccacaaggtaaagtaatgcaacttttgtttcaaatctttccatcattttaacttgtacctatatgcctcattgtgtgcttgtatatgcagggaagtactatgtggttgatgcggggtacccaaaccgcccgggctacctttcaccgtatagatgcactaggtatcatgtggagcaatggaaaaacgggcccccgccacaaggtatgaaagaaacctttaaccatgcacattcccggattaggaatgtcatagagcggtcttttggtgtgttgaagatgaagtggaggatgttgttggacatgccatcgttttcggaaaaaaaacaaactagaataattgttgcttgcatggttcttcataatttcagtcgagagagcaaaattagggatagggaatttgctaggtgtgatgcggatgcagattattttccaatgcctacatcacctcactctgactggccagaagatgaacctcttgttgaggatagcaacatgaatttcttccgcgatgacttggcaaatgctttgtttaatggattgtaatttttttttacggtttgaggacttgtatatttatgtgagacaattgttgtgtggactttaatatttatgtgagacaattgttgtatggactttaatatttatgtgagacaattgttgtatggattttaatatttatgtgagacaattgttttatgtaattgtatatttatgtgagacgattattgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0693600, RefSeq:Os01g0693600