Os01g0708000

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0708000| Description = Similar to Single myb histone 4| Version = NM_001050558.1 GI:115439486 GeneID:4327680| Length = 5641 bp| Definition...")
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Gene Name

Os01g0708000

Description

Similar to Single myb histone 4

Version

NM_001050558.1 GI:115439486 GeneID:4327680

Length

5641 bp

Definition

Oryza sativa Japonica Group Os01g0708000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31161468..31167108

Sequence Coding Region

31161568..31161717,31164309..31164508,31165000..31165078,31165626..31165709,31166441..31166735
,31166816..31166922

Expression

GEO Profiles:Os01g0708000

Genome Context

<gbrowseImage1> name=NC_008394:31161468..31167108 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31161468..31167108 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcgccccgaagcagaagtggacctcggaggaggaggaggcgctgcggcgcggcgtgctcaagcatggccccggcaagtggcgcaccatccagaaggatccggagttcagccccgtcctctcctcccgctcgaacatcgacctcaaggacaaatggaggaatttgagttttagtgcaagtggactgggttcaagggataaattaaaggttccaaggataaaagggccttcatcttccacatctccaagctctcagactccgcttctcgtcctacccccaaataaagttgctgaggcttcaccatccgcagatcctgagaaaagctctcaggatgtgaagattccaaattccatggtaatagaagctctttgtgaaattggggatccaaatggttcggatgttgatgcaatttgccactacatagagcaaaggcacgaggtgcaagcgaattttagaagattgcttactgcaaaattaaggaggcttatagcagcgaaaaagattgaaaagattgacaggtcctataggatcacagaatcttatgcagccaaagtttcgcaagcaaataagtctccaagtccaaagaaggatccagccaagccactgaaggcatcgcagaatttaggttcatttgctggtacgagtcctgccctagaagcagctgcagctgcagctatgaaagtggctgatgcggaggccaaatcacaccttgcgaatgagcacatgacggaggctgaaaggatcttcaagcttgctgaggagaccgagtctctcgttacactcgcaacagagatctatgaacgatgttcaagaggagagatattaacaataatgcaagtggcgcaaagcaattttgaattccaatctgttagcggcaacggcagcggcactggttctactgtacttgcatag</cdnaseq>

Protein Sequence

<aaseq>MGAPKQKWTSEEEEALRRGVLKHGPGKWRTIQKDPEFSPVLSSR SNIDLKDKWRNLSFSASGLGSRDKLKVPRIKGPSSSTSPSSQTPLLVLPPNKVAEASP SADPEKSSQDVKIPNSMVIEALCEIGDPNGSDVDAICHYIEQRHEVQANFRRLLTAKL RRLIAAKKIEKIDRSYRITESYAAKVSQANKSPSPKKDPAKPLKASQNLGSFAGTSPA LEAAAAAAMKVADAEAKSHLANEHMTEAERIFKLAEETESLVTLATEIYERCSRGEIL TIMQVAQSNFEFQSVSGNGSGTGSTVLA</aaseq>

Gene Sequence

<dnaseqindica>101..250#2842..3041#3533..3611#4159..4242#4974..5268#5349..5455#cagaccatagagaaacccaaactagggtttctggtcggatagttcagacgccggagagtgcaggaggcgggggaggcttgtggggaggaggcgcgcggagatgggcgccccgaagcagaagtggacctcggaggaggaggaggcgctgcggcgcggcgtgctcaagcatggccccggcaagtggcgcaccatccagaaggatccggagttcagccccgtcctctcctcccgctcgaacatcgacctcaaggtacagcctctgaccttgcccctgcgccaccgccggctcccatgcgccggtggctcgtgcggtccgctgcgtgctcgttgcatcgctagattttgattagccgagtttccccgtggctctgttcgtgatgcgctgtgccgtctgcgtctgatttcgtgcatgatgctactgttagccgtgtgcgtaggatccttagaactctacagccggggacatttttggtagatttggggttgggcaggtgagattttgggcttctaggtttctaaaaacgcaagcctgagcggactcggtggaatttgattattgcgaagttgtgatgtgaaaaccagggatgtcctggtagattttttttttcgaggcgggggggggggggtgtccagcaggtgagattttgggcttctctgtaactaaaaatgtataagcgtgactgacttggtggaattaattttgatggattgcctttttctctgtgtgggtgtgggtttttttgcgctgcgtggctgccactgccacgtccttgagaagacagacaaccggtggctctgcgtgtgtcggggttggggtgttatgctgcgcggctgccactgccgcgtccttgaaaacataaacggtggttgcttcgtgatctggagcatacagtaaaatactgttttcattcacaaacaaatgatgttagaatatttgaattttgtcttgtgtctgttcatgggataacataatatctgcaaaagttcaattggtggaatggattcattcgttatgtggttttgcccatagatgctgctacaagttcagaagagaagaattatggtgctgttgtctgtgggtatggtcatagtggattgaaactagcaggacagacaggagctgttttctagttgaacaaatgctggagtacctcttccttgataacagagcagttattgctattcagaaaggatttagcattgatcagttgagaatgtggatggatagtcaggtcatgaaccgcattgttcatactgttcataaatcaaaaccttaaatagaatgcttttcatgagtttggagagcaatggagactgagaagtgattgtggcccacagaacggttttggtatttcaagaaacattgcttgctatgtggaatctgattatttactgtaaactgtaatattcaaccacaaaattatttcataaatattttttttaaaaagtcgataattaggcaaatgcttagttatttttgacaatgtagttctattttggatgcaaagttgaccaaaacaaagttggcttagcttttcctccatttaattacaaacctttggatgctgacttggattacatggcctttgaaaactggaacctgtccagattactgaactctattcagtaccataagaaatgacatgagaaactacattgtaaaggtagaaaaaaagttacaaatattttactgtcaaatgtaataataataataataatccttcgtgttttaaaatattttatctaaaacatcatgaatgttgtatcggagggtaatatagttttattgtttcaaggatgaatatcctcctacagaatagaaatagaataatcattctaagttgtacccatccttatatataaagttataatcactatctaggtagttttactaccaaaattacagtaacacacaggggaaaaatttgtagttctcaataattttgaacactgcaccgaatgaccctaccagttctagatattgacaaacttcagattgagtatgtgtttcagtcatttgtgaaggcttgataatcttagataactttgcccaatggttattttacttatttctaatttgattgctgggtcatttttttcgtcctccgggtccaatatgtgaataaactactaaataaatttatgcatataggaacaagttgcacacatatatgtatcacaaaaaaaagtaattatcttctgacctaaacagttgcataaatgcatacatgtaatctcatccaggcgcaatgtcataaaaaatgatcttatgaatgaggggtgatatagagcactagtactttttaagtagtagagatatgctgctggttgcttgtaatgtccctagactgagcatatgtgaaaaaatccgcattgttcatccagtgagtactattacttgttagctgttgctgcaaattcttatgcaacacataatgtttactcttctgaagcaacatttgtgttgtacaattgtagtctcctatttcgtcctctcgtaagtgctaaaatatggaattggagcaatggtatgccagcatgccttttcctgtgatctctttagttaatgaagagggctgtgaaaaatagaatcacataatgttctaagttgatacagatttttttgttaaaacatcttgtcctacattacaatcatcttccatgcctacaatccaagtcagcaatatttgttaaaacttagacgatgtgttgtatcagtattgaaatttgaggaatacaaggaaagtctgtcagttcaattgtactgtgcatcctgcaccctgttcaagtgcttttattatcttcccttctttctgtttcaattttatttggttctttcaggacaaatggaggaatttgagttttagtgcaagtggactgggttcaagggataaattaaaggttccaaggataaaagggccttcatcttccacatctccaagctctcagactccgcttctcgtcctacccccaaataaagttgctgaggcttcaccatccgcagatcctgagaaaagctctcaggatgtgaagattccaaagttagcctttcattatcttcagttcaatcaattaagctgacaggaactacatagtataagtcattgtatgccttcaaattttggtcacaagcatgcactaatttatttttgttcatgaatacatacaaaatttatttttatttattatgcccattttagtattagtgcatgatatgctcaatacacctgaaagtcttgttctatttatctgagctaaattacgatatttgtatgattttcattcgatgaaacagtatgttagtttaaacgatagttactttttacgagcagtgaaataaaaatgaaagagcgaacagagtaatcaagaataatataaaatcataaagattgaaaacaatccttggagcaatgggcagagttggcgatacttttttttatagtttgcaatcaatattatgacaatttcattttgtcctcgacaagcatttgattcagaaattgatcatgtacaaattccctgctaggtacagttccatggtaatagaagctctttgtgaaattggggatccaaatggttcggatgttgatgcaatttgccactacatagaggttgtgcatctgcacaaattttcttatttggtatcactatttgccagtagttatttttatttcttctgaattcattcaagttttgtttgttcttgatttcgtaataaattatgattcagatatgtgtacaactaacatgatcagaatattaacaaaatgcgattgcttgattctttttctcttctgaatcattgcctgattgactgtatggtataaagtcccttagttattggtatatatgtgtgccattgtgtttatttcagcttcctatactttaggaagcttctaaaagtgcctttgctactacaggagctttcactttggattttataacaatttcctgcacaactaccatgtagtgtgggactaaaaaatatttgtttggattcagtatgatggatcccaatcccaaatcagacaaccctgctgagaccattttttcttactcagtgttgcatcctgttttatccttagaagtgattggtaggaattgttatattgctaaatgatgatacattgctatgctgtctttgtaaaatatgtgcagcaaaggcacgaggtgcaagcgaattttagaagattgcttactgcaaaattaaggaggcttatagcagcgaaaaagattgaaaaggtgagatttactaatattccttcttgtaaacaacactattcttttgcttgagtgtggcttacatattcccctttaggttttgtttggatggttaagagtggtgggtttcctagtttctaccatctccacatgaataaggatggaacccactcattctgaggcttattttcccatttcccgctatcttcctcgcataatcaatagctgggtacacatttagggcctctgcatgacgagttgatgactatggataacattggttggaggatagggaagcctcactgagctatcttctcagcatttgttttgatttgagggaaatttgcgatttaaagattttgcaattataactctgcatcaagcccataattcagattcttcattttacttctcttttgtaaaattggcattcaataactcaatttacaattattcattgtggaactgtgcatattattcaagttctaattgtttatttgatatattgactttcccttcgaaatggatttgtctagaatgcataaattggtgtttgaatccagattatcattctttcttttttagtatatggagcacacatgcaatatatcctgtagtcctgtggctaatcttcagaatcttctttgtgtgttcataagatagatagcaaagatctccaggtgcaagtggtagctatctaactacttatgttgacatttatctaactacattatacttttgacatgaaacagattgacaggtcctataggatcacagaatcttatgcagccaaagtttcgcaagcaaataagtctccaagtccaaagaaggatccagccaagccactgaaggcatcgcagaatttaggttcatttgctggtacgagtcctgccctagaagcagctgcagctgcagctatgaaagtggctgatgcggaggccaaatcacaccttgcgaatgagcacatgacggaggctgaaaggatcttcaagcttgctgaggagaccgagtctctcgttacactcgcaacagagatctatgaacgatgtatatatatgatgcctcttgtccagcagtttacttttcaccattccactatttccctttgacttttgctgatgcttcaggttcaagaggagagatattaacaataatgcaagtggcgcaaagcaattttgaattccaatctgttagcggcaacggcagcggcactggttctactgtacttgcataggttggtttgccctgtcatctttggcatgttgttcctccgatgtgtaacttaaaacatgttgttaacttgttatgtacttgggtcgagccggctaagacgtttacctcaaaaacgtcaggtgttccgctcatccttaattataattatataaatgtgcatctcatcttgcgattgcaagtgtgatca</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0708000, RefSeq:Os01g0708000