Os01g0708900

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Revision as of 04:56, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0708900| Description = Mitochondrial substrate carrier family protein| Version = NM_001050565.1 GI:115439500 GeneID:4327687| Length = 4222 ...")
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Gene Name

Os01g0708900

Description

Mitochondrial substrate carrier family protein

Version

NM_001050565.1 GI:115439500 GeneID:4327687

Length

4222 bp

Definition

Oryza sativa Japonica Group Os01g0708900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31214489..31218710

Sequence Coding Region

31214782..31214949,31215820..31215905,31215991..31216198,31216840..31216969,31217149..31217333
,31217446..31217577,31218335..31218439

Expression

GEO Profiles:Os01g0708900

Genome Context

<gbrowseImage1> name=NC_008394:31214489..31218710 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31214489..31218710 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcaccccctcgcagggctcggcggccgtggcagcggctggggtcgacctctgcgtgctcgacctggtgcccgtcttcgccaaggagatgatcgccgggggcgtcgccggcgccttctccaagaccgccatcgcgccgctcgagcgcctcaagatattgctacagactaggacaaatgaattcagttctcttggcgtcctcaaatcattgaagaaattaaaacaacatgatggaattttgggcttttacaagggaaatggtgctagtgtattaagaattgttccttatgctgcattacattatatggcgtatgaacgatacaggtgttggatcttgaataactgcccctcacttgggacaggacccttagtagaccttttagctggttcagcatctggaggaaccgcagtgttgtgtacttatcccttggatctggctaggactaaacttgccttccaggtcaatagttcagaccaaatcagtagtggtttgaagaggacaaactttcaaccaaaatatggaggaataaaggatgtttttcgaggtgtttattcagaaggtggagtgcgagctctctatcgtggagtaggtccaacgctcatgggaatacttccttatgctggtcttaaattctacatatacgaaggactgaaggcacatgtacctgaagattacaaaaattctgtcacattgaagttgtcctgtggtgctgctgctggattatttgggcagactctaacttacccactagatgttgtaagaaggcagatgcaggttcagagtcaacaatatcacgataaatttggtgggccacagataaggggaacattccaaggtcttatgatcatcaaacaaacgcagggatggaggcaattgtttgctggcttgagcctcaattacatcaaggtggtaccctctgtggctattggttttaccgcatatgacacgatgaagagtttactgaagatacctcccagagagaagaaaatgtcaggtcatggttctaattga</cdnaseq>

Protein Sequence

<aaseq>MGTPSQGSAAVAAAGVDLCVLDLVPVFAKEMIAGGVAGAFSKTA IAPLERLKILLQTRTNEFSSLGVLKSLKKLKQHDGILGFYKGNGASVLRIVPYAALHY MAYERYRCWILNNCPSLGTGPLVDLLAGSASGGTAVLCTYPLDLARTKLAFQVNSSDQ ISSGLKRTNFQPKYGGIKDVFRGVYSEGGVRALYRGVGPTLMGILPYAGLKFYIYEGL KAHVPEDYKNSVTLKLSCGAAAGLFGQTLTYPLDVVRRQMQVQSQQYHDKFGGPQIRG TFQGLMIIKQTQGWRQLFAGLSLNYIKVVPSVAIGFTAYDTMKSLLKIPPREKKMSGH GSN</aaseq>

Gene Sequence

<dnaseqindica>294..461#1332..1417#1503..1710#2352..2481#2661..2845#2958..3089#3847..3951#gcatattactcgtcgccaccgcggtcaccgcccctctcctctattgttttctcgattcttcgcagggaaggggatacgcgcaagaaaccgcgagccattccgcgcaggtcgtcgccgcggtcaaatccggcggcggcggcggcggcggaggccggagggctaaacgggccgcccccgtccggtgagatccttgagggggtcctccgccccccttgtgtggcttggggggggggggggggcgattcttcgcgcgggtgggtgctcgatttggatgagaggagcgcgacggcgggatgggcaccccctcgcagggctcggcggccgtggcagcggctggggtcgacctctgcgtgctcgacctggtgcccgtcttcgccaaggagatgatcgccgggggcgtcgccggcgccttctccaagaccgccatcgcgccgctcgagcgcctcaagatattgctacaggttcgtcttgtagtgctcatcatattatagtcttggattgggcgcatggaacaaaaagaagtcgcttggattggagttcggtagttaggtattttgggcaattgtcggttgcgagccgctgtaggaatggttcgcttcaggatctccgatgtaactttgttaataggacgataactttttgtagcctgagataatacaatttttatttgtttgcgacaaatttactaaaaagtgtgctacctcacgcatcataaaaccactgcagcaataatccggtgaaacataaaagaacgggactagagggatgcgtctcttcttaattgaaaatgtagatgtgcaagaaggtagtgcctgcacgtgtagattgatggatgtcatggttttaggacgattaaaggggtaccataccacaaaatagttgtaaagagtttcaacaaataagattctactaggtacctatttaaattctaccataaacattacctgatcggttagtaagcacacgttactccactcagtatggttgcagccataaattcatcctttgatgggttgggatataggctggagggagattctcagctttcaaaaatctctgcttcaatcaagtccatactccacacaactctcctacagactttttttctcatcatacatttctttgatttctaatatgcattttggagcattgtagacgccattacaatgatagttagaaatgccacttccagaagtttcacaaattctgcttcacttgaccgtgttgactagctacatatgatctgtttaaaacatctagtttgcccctgatgctattatgagatatcactatgtctaacatgtgcttactttctgattctgcctttatagactaggacaaatgaattcagttctcttggcgtcctcaaatcattgaagaaattaaaacaacatgatggaattttgggcttttacaagtatgtggcaattcaactcatgtacaatactaagatactggttgtatataacattgctcactaaccatgtctttgtgctactcaggggaaatggtgctagtgtattaagaattgttccttatgctgcattacattatatggcgtatgaacgatacaggtgttggatcttgaataactgcccctcacttgggacaggacccttagtagaccttttagctggttcagcatctggaggaaccgcagtgttgtgtacttatcccttggatctggctaggactaaacttgccttccaggtattgcaatccacatctcattattgttgttctctttggtccttggtcctcacttagcattgcttacttgccattctaggccactgcccacttctgtgcttgcacattcccacttcattgcagttgacagccatagtgtagtataattaatatagtagaaagtcagcataactgctcctgtttttaagatctcgctagcttgctatcatatgtgtgcaatcaagtttatgtaactttggtcacttgtatatataatgtttctcaatcgctcatatggaaaactgaaaatagtaataatacattgatgtaaagtagcaaactactccgatgatatctttagggctgaagtagttacaagaaaacaacgtttacttctgagcagaaggaatatcacgctatgtcgccatggagaaatgctacctagactgtgaattgtccatcagtaacctcttgggagtaaattccctgacgcattaggatgagccttttttttgtgtgttatgtagtgttgctctttagtttaatgaagaaccctttggttgtctgtattgtgtgcatcttcttttgctttgcattgttatgtgctgtacatcttttgctttgcatttatatgtcctaagcttgttttgttttgcttgaaggtcaatagttcagaccaaatcagtagtggtttgaagaggacaaactttcaaccaaaatatggaggaataaaggatgtttttcgaggtgtttattcagaaggtggagtgcgagctctctatcgtggagtaggtatgtatatccgactcatatatgtctaaatggctattcaatcaccataaaactctctcttgaactgaaaacgtcggatgtatatattcctgcttcacttttgacgagtatcagttttttcagtaccttcattactgtagtagttttgctgctgaggactcttatctatttgtgttcaggtccaacgctcatgggaatacttccttatgctggtcttaaattctacatatacgaaggactgaaggcacatgtacctgaagattacaaaaattctgtcacattgaagttgtcctgtggtgctgctgctggattatttgggcagactctaacttacccactagatgttgtaagaaggcagatgcaggtattccattttctcatataatccttcctcttctagcatatccttttttatttttctgaaagactatgttcctcaactatttatcatatttgcgtctgcttccattttgtaggttcagagtcaacaatatcacgataaatttggtgggccacagataaggggaacattccaaggtcttatgatcatcaaacaaacgcagggatggaggcaattgtttgctggcttgagcctcaattacatcaaggtaatcacgtggataatctattggtttccccttcatagttcaattttacataggtgcttatttgcattcaaaatatcctggaaatggtactagtcagataatcaagaatgctaggactgatggcaggtcaatcatctggaacatttaagtacattaactattttgctagctagaatcgctagaaccaagtgataaccaactatttactggttagacccaagtaataatactcgctctcgtaatagttcctagaacctcaaattctgaacctttacgccccaagaaaaaatagcattcctgtgcttgctttggctttgaaacttttgtggttacatggtaattctgagcaatgttctgcaccctaacctggagcgaggcgattcttgttagtcatttgcgtttatattccactgaaaagcatcactttttgcatttgccactcaactgacaagaggatatggattccagttgtacatgtcagaactgtatgaatctttccagtggcatgtataaaattctgcagatcattttttttccctcttgaacttaattttccttggttcctttcatttatacaacattgaattgcatgattgtcttcaatattcttgttttagctatttgtccagctcagtttcagccgaaaaccttacttgttgaatgatgtgtattcacaagagattatttagttgcaacttacataaatgtgttgagttagccagattgacccttataaaaatattgtttctttttataggtggtaccctctgtggctattggttttaccgcatatgacacgatgaagagtttactgaagatacctcccagagagaagaaaatgtcaggtcatggttctaattgaagtttctatccatccgtaagaaacatggagcagggcaaggttctctttcaagattttatcaagtgccttttgtgaagtcacaattgtataaagcctctgaggttcaatcttgtcaagtagtaattgtgttaactaacaagcttacatattcttccgattcattattttcattcattacatccaccagatgtggaacgttgtaaatttgtagggtgctaccacaacttttaggatgctacaaaaggtttcaaaattccatacgggttttccc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0708900, RefSeq:Os01g0708900