Os01g0714900

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0714900| Description = Similar to RAB7A| Version = NM_001050595.1 GI:115439560 GeneID:4325946| Length = 4895 bp| Definition = Oryza sativa...")
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Gene Name

Os01g0714900

Description

Similar to RAB7A

Version

NM_001050595.1 GI:115439560 GeneID:4325946

Length

4895 bp

Definition

Oryza sativa Japonica Group Os01g0714900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31486016..31490910

Sequence Coding Region

31486266..31486332,31487178..31487323,31487393..31487473,31489846..31489992,31490089..31490188
,31490548..31490574,31490736..31490791

Expression

GEO Profiles:Os01g0714900

Genome Context

<gbrowseImage1> name=NC_008394:31486016..31490910 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31486016..31490910 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcgacgtcgcgcaggaggaccctcctcaaggtcatcgtcctcggcgacagcggggtggggaagacgtcgcttatgaaccaatatgttcacaagaagtttagccagcagtacaaagctacaattggtgcggatttcgtcaccaaggaggtcctcattgaagataggctcgtgactctgcagatctgggacactgcggggcaggagaggttccagagtcttggtgttgcgttttacagaggagcagattgttgtgtgctcgtctatgacgtcaattctaacaggtcatttgacacgctcaacacatggcatgatgagttcctcaaccaagctagcccatcagatcccaaaacttttccattcatcttacttgggaacaagattgacgtagatggagggaaaagcagagtggtttctgagaaaaaagcaatggagtggtgttcatccaaaggcaatattccttattttgaaacttctgcaaaagaggaccgcaatgtcgacagtgcgttcttgtctgtcgctaagcttgctttagagcatgagcgtgatcaggacatctacttccagacggttgttccagatcctgttccagaggctgaacagagaagtggatgtgcatgctag</cdnaseq>

Protein Sequence

<aaseq>MSTSRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGA DFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNT WHDEFLNQASPSDPKTFPFILLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSA KEDRNVDSAFLSVAKLALEHERDQDIYFQTVVPDPVPEAEQRSGCAC</aaseq>

Gene Sequence

<dnaseqindica>4579..4645#3588..3733#3438..3518#919..1065#723..822#337..363#120..175#aattctctttttttttttttcttcgcctcccccccaaactcctcgtgcgcctcgcgacgaggggacgacgacggcgacgacagggccgcgaggagatcgaatcgcgatcgccgtcatccatgtcgacgtcgcgcaggaggaccctcctcaaggtcatcgtcctcggcgacagcgggtcagcgcccattcccccccccccttcctcccctcgattccgctcggcgacggtggattcgtggttttttttttcccgagtggcttgatttggatgcggttgcagtaacctgtatgaggtgtgctgtgctggtttgatttacccctgtttgatctgtgcagggtggggaagacgtcgcttatgaaccagtatccttgctgctgcattttagctttatctcgcttgatcgctgcggagttacccgtttcttgattcattctctctctctctcttcaaacccgtcctagtgctgctccgttgcgatttttgaagcatttgtgagccgttctgggattgcttgctgtgaatcgtgcttagctgcatttctgcgctgctaatttcatttgtattggtgcgtttgtgtcattgaatctctggtatgattttgaggtaatgagggaagtatctctggtgtgattttgaggtaatgagggatcttaatgtggctgctatcaaatgttagattcacggcagtagttggcactttgatatgcttgactttagttagatatgttcacaagaagtttagccagcagtacaaagctacaattggtgcggatttcgtcaccaaggaggtcctcattgaagataggctcgtgactctgcaggtgactttgatcccttagcccttagcagctcttttgcagtgagaaaatagagtgactgttgtaatgttgtcactgtcatgattgcttaaattgtagatctgggacactgcggggcaggagaggttccagagtcttggtgttgcgttttacagaggagcagattgttgtgtgctcgtctatgacgtcaattctaacaggtcatttgacacgctcaacacatggcatgatgagttcctcaaccaagtaagttattatctcatgtcattgtgatgcttagtcaatggtcgtagacaatggctgtagagctatttatgattttttgtgatgtgtatggcctggcgaaaaaagatagcttagtgtgatgttgccactaactttctgaaagttgctcatgcttagctgcttaacatttgtttttatcctgtgtttgttctggcaaagcttctgcatgataatcctagttgccaagaatatattatttatggatggcttatgctataacaatacatccagtttcattatgcaaactgacatatatttgcatacttctgctgattgtgcatgataatcctaaacacagcatatacttctgctattgggtgctcagggggctgtgtctgctcaaacatctagctaaactgcacccttcccttgtgcagcttgtgcccctgtgctctggtgaccctgcacttgtaaattagccaccaggaggataaacaaaccctgtgacagtaaatgaatcgccatacccataaacggaccattgtaaggaatttaaccaaacaaccgcaatcgtaaacagacctccatgactgtaaatcaagaccattgttgcctctctctctcaaaaaaaaaagatcagctttttaggagcctggagggtttgggcggctcatttctccacatttaaaatgcttctctctctcccaccccctctcaacagcgatttccgcaagtgacaggtgattcagttcatggggtgcatcttttcttcatcgattgattgatattgaactattgatgacgattcttgtgatctgaacaatcactcaatgttgcactggtagcatccaatggggaactatctaatgaaaagaggggtaaagataaggccaaaaagaaattaattgattctgttgatgtatagttcgtggttgcttatatatggttacaggcttacagcctcctctgaactggaagatcaatttgagatcttcgagcatattcgagtgttcaatgtgactactgtcacttcaaccaatacaaaagatgagactttactactgtggagcggctttttgctaaaagatgagggggaaagtaagtaagatgtcggagaagcgaaatatatgagatcacaaacgtagattgcttggggctaaatatgaattgagatagcattttttacctgatcttttgtctgatatgcgggacgaacattattataagctgtccaagttgccagaaatacttccatgtcctcagacatcagatatctcagaaggggataagctgcagctatatagctagcggagtgaccgcctcagagacaaggaaactcatccttgtcagtatcgtatgatgactttggtgttgcgtcaaggaagaaactcagtctgtttatatgagctttaccttttgaatttcaagttatgttttctccttgaagtcttaaacattgactagcccatagctgcctaacttgatcaccaatgacagcatggcgttgaggagggtttagatctttggtaattgttactggcaaggtgtccaccttagtgcataactatcaaatgtgtgaagatctcaaagtaatgaaaactactgatatactgaggtcctgacctccacttatcctttaatgatatcattgaatggcagtattatattgatgcttatattcttgatgaattcaaagccagtattttctaaaggttttcgcatatttcattttagatttccatagaaggatttgtgtattaaagggcagctatgatgatactgcaagaacttttcttctgatcagtcaaaccttatcagtagaatgatatcaataaaaaaacaactatgtttctcaggaggtcataattttggatggacttcttgctctcagctatttatttatgtcaaattatgcaactgagtcaagtgtgcttgttgctatttgaaggtgcaacctgtaagcctgtaattggatgttaccatttggaggaataagcctgtaatactcaataaaaaactcattgggcttgagtgttgggatttttcataattctacagtccttgctgagttcattgagaattttacggtcctatctcctttctccaagcactaatgtttttcactttgtctgcggaatgtgttttatgtaccaagtgcatagatactatctgtacattttggttgttacaaacttttgctggcataataccttttagtacttaaattttcaatgtaacttctgggtggacaattttctaaattgactaatgcttaaattatttcttttgatctggatatcaaattagctgtaatattgcatttccatctcatgtaacatcctgtaaattattgactaatttaattggcatgatgcttttccatttccttttaggctagcccatcagatcccaaaacttttccattcatcttacttgggaacaagattgacgtagatggagggaaaagcagagtggtgagtttctcaagtatactatcaacttttgcctctatatgtgggactacatacttactattcacacaggtttctgagaaaaaagcaatggagtggtgttcatccaaaggcaatattccttattttgaaacttctgcaaaagaggaccgcaatgtcgacagtgcgttcttgtctgtcgctaagcttgctttagagcatgagcgtgatcaggacatgtgagtagaatcatcttcctctctttgttgtcttgtcgaaaacattgactgtgtaagcttatgtcatgcatatgtgaatttccttgaatattttgttaaagaatttactatatatactagcattttagttacatttgatttatttatatgttttcaactaagcattaaggtcctttcttaattagagatgattttgcccatttagcacattattttttacttagttgggtaggttttacagctcacccaccgcccagctattgtcttatgggctaatgtttgtttagtcgcttgtgtagatgttctttataaatatttctggtagtttcagttcttaaatatcattgtgtgtgccgttcgtttccagttgcccaccacttctagtactttcatatgtcatgtgttcttaaattattaaggttatgtctgcttggctattattaaatgatacaatgttttgttgctacccttttgtgtgttgctgttatcggtgaacttatgtacaaaaaatgtgctgctaacaatggcatatctgaactgaaataagtaaagaatgtctctgttaatgtgtgaggattaagagtgaaatactgtccaccatattagttgtgttctgtgtggacagattggcatagagatatctagacaatatgaaacgataaaacttccactagttgatccatgccattgcatttcacataactctattgttggttttaatactgatagttgtaatctattcctatccttttcattcttgtgtttgctatggtttcgttacattgtttcgacagatctagcttgatcttttttggttactcaccgtcatttttcctggccttcagctacttccagacggttgttccagatcctgttccagaggctgaacagagaagtggatgtgcatgctagcagctagttattgccgttgcaggttatgcttactgattgtgatatttttttgaagtgatgttgtgcattctttgatgtacactaaggttcctatgcggccattctactcccttttgtagtcattgtacgatagttagccactactgttttggcccaagagtactcatgcggagtccttttcctccaattgggcaataagaatgtacagaggctgataatttggaataatgccctatctgctgtttatctc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0714900, RefSeq:Os01g0714900