Os01g0716800

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0716800| Description = Endonuclease/exonuclease/phosphatase domain containing protein| Version = NM_001050607.1 GI:115439584 GeneID:4325585|...")
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Gene Name

Os01g0716800

Description

Endonuclease/exonuclease/phosphatase domain containing protein

Version

NM_001050607.1 GI:115439584 GeneID:4325585

Length

5826 bp

Definition

Oryza sativa Japonica Group Os01g0716800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31586110..31591935

Sequence Coding Region

31586166..31586342,31586470..31586590,31587691..31587762,31588157..31588244,31588475..31588582
,31588691..31589493,31589801..31589987,31590515..31590623,31590714..31590856
,31591404..31591626

Expression

GEO Profiles:Os01g0716800

Genome Context

<gbrowseImage1> name=NC_008394:31586110..31591935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31586110..31591935 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggccggcgcctcctccacctccgcgtcggcgcgggccacgccaccggctcgctcattgcctccgctcggcgcgtcggggagccagcaggagccggctgccactgcgagccaccacgccgccggcgccggcgcctcgtccaggccgatgcggcgcaagggaaggaagcagaagcagctgtggccgaagacggtgcttcggaaatggctcaacatcaggtcgccggaatccgacttcagcgccgacgagggcgaagccaccggcgacgacgacaccgatagcgagttcgagtacgaagaaatgtgccattgggagcgccaactatatgatgaggagaggagactgcgtggtttgggcgctgagacaattgatagccaaatggagggtgctccctacaagcttaatagaaggcgcaagtcagagacccttcgtgcccaatatatcgacattaaggaactcagggtctgcgtaggaacatggaatgttgcaggaagacttccacctgatgacttggatattcaagattggttggatatggaggagccagctgatatttatgttcttggatttcaagaaattgttccattaaatgctgggaatatatttggtgctgaagacaaccgtcctgtcgcaatgtgggaacatatcattcgtgaaacattgaataagattagtcctgataaaccaaaatataaatgtcacagtgatcctccttctccatcaaggttcaagccttctgacgatgtggaagatgaacttgttagtgaatctgacagcgaaagtggcggggaagtgcacccatggaatgaacaagattttaccgttgatgatgacagtgttcatagtaataaatatgagcactctacttctggtcctactgaaactaccgtaaatggaaacaacttcagcagggtgccttcaatgaagattttcgatagatcacacaacttaagttttaaagactatgtatctagtttggaagagccaatccatcaaaaaatgttaactaaaacactcagctactcagagaggcttggaatgatttggcctgaacaaccgttggatatattggcccagcgtcttccagacagcacgaaaccatttatttcagagaaggcactgaggtcatgtttgtctttcaaatcagcacatggagattccaatgcttttccagatgattgtttagttcatgattttaacatcaaaagtgcactagtcaaaacgaaaagaccatacttcgtaaggataataagcaagcagatggttggagtttttatttcaatatgggtacgaagaagcctgcggaagcatattcaaaatttgaaagtatcaaccgtaggtgtcggtgctatgggttatattggtaataagggatcaatagcagtaagcatgtccatttatcaaacactcttttgctttatatgttgccacctgacctctggagaaaaggatggagatgaactgaaaaggaatgctgatgtgcaagaaatccatcgaaggacaatatttaatccggtttccagagttagcatgcctaagactatatatgaccatgaaaggataatatggttaggagatctcaattataggatcaacttatcatatgaaaaaacacatgaattcatatccatgaaggactggaatggtttgttccagaatgaccagctaaaacgagaatttaagaaagggcatttatttgatgggtggactgaaggagttatcagctttcccccgacatacaagtacaaggttaactcagagaaatacacgagtgatgagccaaaatctggaaggagaacacctgcctggtgtgaccgaattctttcctttggcaagggaatgaggctgcaggcctacaggacagttgatatcaggctatccgatcaccgccctgtgacagctgtgtacacttccgatgttgaggttttctgtcccaaaaagttgcagagagctcttaccttcaccgatgcagaggttgaggaccaattctcatttgaggaagagagcacttctggaatctttagcttttga</cdnaseq>

Protein Sequence

<aaseq>MAGASSTSASARATPPARSLPPLGASGSQQEPAATASHHAAGAG ASSRPMRRKGRKQKQLWPKTVLRKWLNIRSPESDFSADEGEATGDDDTDSEFEYEEMC HWERQLYDEERRLRGLGAETIDSQMEGAPYKLNRRRKSETLRAQYIDIKELRVCVGTW NVAGRLPPDDLDIQDWLDMEEPADIYVLGFQEIVPLNAGNIFGAEDNRPVAMWEHIIR ETLNKISPDKPKYKCHSDPPSPSRFKPSDDVEDELVSESDSESGGEVHPWNEQDFTVD DDSVHSNKYEHSTSGPTETTVNGNNFSRVPSMKIFDRSHNLSFKDYVSSLEEPIHQKM LTKTLSYSERLGMIWPEQPLDILAQRLPDSTKPFISEKALRSCLSFKSAHGDSNAFPD DCLVHDFNIKSALVKTKRPYFVRIISKQMVGVFISIWVRRSLRKHIQNLKVSTVGVGA MGYIGNKGSIAVSMSIYQTLFCFICCHLTSGEKDGDELKRNADVQEIHRRTIFNPVSR VSMPKTIYDHERIIWLGDLNYRINLSYEKTHEFISMKDWNGLFQNDQLKREFKKGHLF DGWTEGVISFPPTYKYKVNSEKYTSDEPKSGRRTPAWCDRILSFGKGMRLQAYRTVDI RLSDHRPVTAVYTSDVEVFCPKKLQRALTFTDAEVEDQFSFEEESTSGIFSF</aaseq>

Gene Sequence

<dnaseqindica>57..233#361..481#1582..1653#2048..2135#2366..2473#2582..3384#3692..3878#4406..4514#4605..4747#5295..5517#ggagaagttgccttttgctgtgtgcgctgtgttggtgggctgtgacgagggcgcgaatggccggcgcctcctccacctccgcgtcggcgcgggccacgccaccggctcgctcattgcctccgctcggcgcgtcggggagccagcaggagccggctgccactgcgagccaccacgccgccggcgccggcgcctcgtccaggccgatgcggcgcaagggaaggaagcagaagcaggtgagcgccgcgctagctaaagctcgctcgctctctctctctctctctctctctctcggatcggagtttcgttgctcgggggctaactgatacgtttggtcggacgcgacgcggggcatgcacacagctgtggccgaagacggtgcttcggaaatggctcaacatcaggtcgccggaatccgacttcagcgccgacgagggcgaagccaccggcgacgacgacaccgatagcgagttcgagtacgaaggtgatctagaccctctccctctctctaccacatgggcttcattattgcaaaataaaaataaaaaaaaatcgaaaccaaaattcgctgtgaagctcaatggatcgggaaatgcattcgggttttggttcaaccactggtccctcgtctccagaattgatctttttgtccatcataattctttggaaaagaaaagttgtggaccagaagaatgcatcgattggtttggtaggtggatgtttttgcttacaaccaataaagatgagagctttgacggttgcttctttcaacttgagctggtccagttagcacttagcacaaccgtaagattctggtatttcaggggggaaaaaggataggaagtggaaggggagttaacgaaatttggagatgcctttctaaccttgctcattagagcaagtttaatagtagagcttactccttactaaattcattgtagaactaacatgtataatatattagctacgaggttagctctatttgttttcctcctctttctttccctcaccacgaagttaatgcatatttttggagcatgtttagagctagcttttctatgagagtcactcaattttttctctctcttccacttaagcatatagcttttttataactcactactatcctcgctcttaaaaaaagtagaggtggactgtattgttcttttggtttcttgtggtggtgtattcccaactcctaggctattcctttggtttgtttattcctccgtttacctagaacaaaaaaacaaaattagacgttgaattcaaagaatgttaaaaccaatgtttcttttgtttagtgaatttcaaaacgacaagctctcccatcctattcctaagatagtatactagtacaatctttctaaaggaaataaggaaaaaaaatgaaaggacatctgaatctgacggccataaatacatttgccgcacatgtatgctgacaaaaaggaggcagctttaaaaaagggaaaacaagtgtaaattttgcacttaaatttgttggctacggcatatgtatgttcagttctttttcaaaaattggttctaataatagttgaacttataatgggatttgtgcagaaatgtgccattgggagcgccaactatatgatgaggagaggagactgcgtggtttgggcgctgagacaattggtatttatttgattcgcataattattgtgttcaacacattcatcggcaaaagggttattgacaaagcatcacatgaaaaatttgaactacatatcaccaacgaaataagttactatattaatcacagtagcaaacttctttttttctggatgcttatttccaggttttgtttaatagtatgttttcttctttgttttgccacacactgaaaattgtgaaatacggtgttgattctgccaaactaagagatactacatggtacatactagtccaccctttcaccaattttcgatgggaactagtactacctcttaagcacctctggcatacacatcctatcagagaaaacccaggtagcttccttgtgcactgacgaagactatcaaatcttcagatagccaaatggagggtgctccctacaagcttaatagaaggcgcaagtcagagacccttcgtgcccaatatatcgacattaaggaactcaggcatgcatttgttctcccttcagattatctggacttgcctagttgtttgttcacagtattttccgtaagaatttgcttcagataagctaaatgacttggtttgttcctcaatatatttatctttcctagcacaagaataaccccttaagatcaagcctaattgcagctgaaacctataaaatctactgccgttctgtcactattccttaaaatgttggtttgatatgcagggtctgcgtaggaacatggaatgttgcaggaagacttccacctgatgacttggatattcaagattggttggatatggaggagccagctgatatttatgttcttgggtaaattgttgcatcccatcttgttacttattcatattacactatgactgatatttctcctttttatttttttcacctattaaacaaattgaacttattatcttttagatttcaagaaattgttccattaaatgctgggaatatatttggtgctgaagacaaccgtcctgtcgcaatgtgggaacatatcattcgtgaaacattgaataagattagtcctgataaaccaaaatataaatgtcacagtgatcctccttctccatcaaggttcaagccttctgacgatgtggaagatgaacttgttagtgaatctgacagcgaaagtggcggggaagtgcacccatggaatgaacaagattttaccgttgatgatgacagtgttcatagtaataaatatgagcactctacttctggtcctactgaaactaccgtaaatggaaacaacttcagcagggtgccttcaatgaagattttcgatagatcacacaacttaagttttaaagactatgtatctagtttggaagagccaatccatcaaaaaatgttaactaaaacactcagctactcagagaggcttggaatgatttggcctgaacaaccgttggatatattggcccagcgtcttccagacagcacgaaaccatttatttcagagaaggcactgaggtcatgtttgtctttcaaatcagcacatggagattccaatgcttttccagatgattgtttagttcatgattttaacatcaaaagtgcactagtcaaaacgaaaagaccatacttcgtaaggataataagcaagcagatggttggagtttttatttcaatatgggtacgaagaagcctgcggaagcatattcaaaatttgaaagtatcaaccgtaggtgtcggtgctatgggttatattggtaataaggcaagttcccgtgaagcacatcattctcaattcctttagcaattccaaatatgtagaaaacaattagcattcctttttttggataatagaaatggtttacatctccggcctctactgttaggcacagccaaaattagcattcttttatactatatttgttttcttaatgatcatattacactttcgttttagcacctagttttgtgcactttggtcgtaccatctcatgtacatttactatgcgctggtaagtcaatgtgctatttagaaaacaatgggctaatttttcttacttgacatgctccagggatcaatagcagtaagcatgtccatttatcaaacactcttttgctttatatgttgccacctgacctctggagaaaaggatggagatgaactgaaaaggaatgctgatgtgcaagaaatccatcgaaggacaatatttaatccggtttccagagttagcatgcctaagactatatatgaccatgagtaagtacgtaaacttgcaactctaaaacactagaagctcagtacgcaattcctaaagctctagctaaactaagcatgttttttatccatgccatttgatactcttttggagatgatggctcaatttcagtttagattgtgtttggcgtcactgtttacttgtttaaatatgatgggataacaagggataaatgattaaagtgaatctgtgcatattagtggcaaaaatcacataatgaagcagatgatggctcaatttcagtttagattgtgtttggcgtcactgtttacttgtttaaatatgatggtataacaagggataaatggttgaagtgaatctgtgcatattagtggcaaaaatcacataatgaagcatgtgttcgagggttgcacacatttgaaatttttcttatacttcttttgttcattttagttttatttgatcaagaattgcaggaaacattgcttattagtttatataaatcttatcagtttgtctaatatttttattttcttgaatatttcagaaggataatatggttaggagatctcaattataggatcaacttatcatatgaaaaaacacatgaattcatatccatgaaggactggaatggtttgttccagaatgaccaggtaaagttttggcagcagtgcagcatcttgtgacatactcctactactttataaatacatagtacctcactgttttctactctatgatagctaaaacgagaatttaagaaagggcatttatttgatgggtggactgaaggagttatcagctttcccccgacatacaagtacaaggttaactcagagaaatacacgagtgatgagccaaaatctggaaggagaacacctgcctggtatgctaatctgatcattcgtaacttgatctgcatacgctcttcatttttttttatcctgtcctttcttaatactccctccgtcataaaatacttgtctttctagcattcaaaagttgtcctaaaatagttatcactttgaagtattacttgtgacatcaaccacttacaattcaaatttctcaccattctacccctcaactataatctcagatccacctatacattactactatttaataagaggtattgtagtattttttttctaaccctaatacatgctaaacaacctagaatgggacggaggtagtaacatttttcctcgttgtttacacgattaatcacctcataactcatgaaggtgtaagaggtattgtaagaggtattgtgtaagaggaaagaattggtcctcataactcacgattaatcacctcattactactatttaataagaggtattgtaagaattgaggttgtgtatgaggaaatctctaagttgcgatgagcgatgcgtgctaacaaaaaaaaatattgtttaactttgtaggtgtgaccgaattctttcctttggcaagggaatgaggctgcaggcctacaggacagttgatatcaggctatccgatcaccgccctgtgacagctgtgtacacttccgatgttgaggttttctgtcccaaaaagttgcagagagctcttaccttcaccgatgcagaggttgaggaccaattctcatttgaggaagagagcacttctggaatctttagcttttgactaggatgagcaccaagtacatcggggaatttatgtaatgaattgcgatgcttttctgaagtctccgaggaattattgttctcacatttcatccgctatttccagtatccatcctactcgcaattagcatcggccatcatgtacattccttccacactctgtatttggagaccagggcgtggcatgtttttttttttttagctttactcttgtgtgcctcttctgactatgaggagtttgtacgcaataatggcctccgtgacgatctgattttgtaattaaacatttgaatactgtagattcctaggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0716800, RefSeq:Os01g0716800