Os01g0719700

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0719700| Description = Similar to [4Fe-4S] cluster assembly factor| Version = NM_001050621.2 GI:297597514 GeneID:4324700| Length = 3367 bp|...")
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Gene Name

Os01g0719700

Description

Similar to [4Fe-4S] cluster assembly factor

Version

NM_001050621.2 GI:297597514 GeneID:4324700

Length

3367 bp

Definition

Oryza sativa Japonica Group Os01g0719700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31764250..31767616

Sequence Coding Region

31764250..31764340,31764471..31764587,31764687..31764817,31764908..31764958,31765227..31765277
,31765452..31765595,31765670..31765812,31765964..31766036,31766128..31766223
,31766325..31766423,31766493..31766546,31766620..31766743,31767008..31767132
,31767308..31767430,31767536..31767616

Expression

GEO Profiles:Os01g0719700

Genome Context

<gbrowseImage1> name=NC_008394:31764250..31767616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31764250..31767616 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggaacctccgcgccgccgcgcctgcctccttcctcgcgccgcccgcgccccctctcctcctccccccgtcgactccaaccccgcgaggcgccttctcggcgaaggcttctcctgccgcggcggccgcccaggcgcatggctggtgcccctcgccgcggcgcgtgggccggctccggcggcgcgcgggagccgcttcgtcgagcgtggcgtcggtggaggacgccaagaaggacgtgctcgtggcgctctcccaaatcatcgatcccgacttcgggacggacatcgtctcgtgcgggttcgtcaaggacctggagattagcgaggccttggaagaggtctcgtttcgtctggagctgacgactcctgcctgcccgatcaaggacatgtttgaagagaaggcaaatgaggttgttgcagcacttccttgggtcaagaagggaggagttggaaagtctacagttgctgtaaatcttgcatatacattagctggtatgggggccagggttggaatatttgatgctgatgtcttcggtccgagcttaccaactatggtttctcctgaaaaccggctgctagtgatgaacccagaaagcagaagtattcttccaaccgagtatttgggcgtcaagatggtgtcttttggctttgctggacaaggaagagctataatgcgtggtccaatggtttcgggagtgattaatcagttgctgaccactactgattggggcgaactcgactaccttgtcattgacatgcctccaggaacaggagatatacacttaacactctgtcaggtggtagccccattgactgcagctgtcattgttaccacccctcagaagcttgctttcatcgatgttgcaaagggagttagaatgttttccaagctgaaggttccgtgcgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaacgattttacccatttgggcaaggttctggagctcaggcaagaaaagttgtgcagcagtttggaatacctcacctcttcgatttgccgatacggccaactctttcagcgtctggagatactggaattcctgaagtagtggctgatccacaaggggatgttgctaagacgtttcagaatcttggagtttgtgttgttcagcagtgtgctaaaatcagacaacaggtttcaacagcagtttcctatgatagatcaattagagcaatccgagtgaaagtaccagattcagatgaagagttcttgttgcatccagcaacagtcagaaggaatgaccgatctgctcaaagtgtggacgaatggacaggtgagcagaaagtacaatatggtgatataccagaagacattgaacctgaagagatccgtcctatgggaaactacgcagtttctataacttggcctgatggtttttctcagatagcaccttatgatcaattggaaatgcttgagaggcttgtggatgttcctcgtgcaacaacagcagcagtctcttcatga</cdnaseq>

Protein Sequence

<aaseq>MRNLRAAAPASFLAPPAPPLLLPPSTPTPRGAFSAKASPAAAAA QAHGWCPSPRRVGRLRRRAGAASSSVASVEDAKKDVLVALSQIIDPDFGTDIVSCGFV KDLEISEALEEVSFRLELTTPACPIKDMFEEKANEVVAALPWVKKGGVGKSTVAVNLA YTLAGMGARVGIFDADVFGPSLPTMVSPENRLLVMNPESRSILPTEYLGVKMVSFGFA GQGRAIMRGPMVSGVINQLLTTTDWGELDYLVIDMPPGTGDIHLTLCQVVAPLTAAVI VTTPQKLAFIDVAKGVRMFSKLKVPCVAVVENMCYFDADGKRFYPFGQGSGAQARKVV QQFGIPHLFDLPIRPTLSASGDTGIPEVVADPQGDVAKTFQNLGVCVVQQCAKIRQQV STAVSYDRSIRAIRVKVPDSDEEFLLHPATVRRNDRSAQSVDEWTGEQKVQYGDIPED IEPEEIRPMGNYAVSITWPDGFSQIAPYDQLEMLERLVDVPRATTAAVSS</aaseq>

Gene Sequence

<dnaseqindica>1..91#222..338#438..568#659..709#978..1028#1203..1346#1421..1563#1715..1787#1879..1974#2076..2174#2244..2297#2371..2494#2759..2883#3059..3181#3287..3367#atgcggaacctccgcgccgccgcgcctgcctccttcctcgcgccgcccgcgccccctctcctcctccccccgtcgactccaaccccgcgaggtgagcgcacacggcggttggatggttgccttgtctcgcgttcagcttctactccgtgctcatgctctgacgcgcccgagcaggggctctcaccggcgagctaactccacggatttcatggttcttgcaggcgccttctcggcgaaggcttctcctgccgcggcggccgcccaggcgcatggctggtgcccctcgccgcggcgcgtgggccggctccggcggcgcgcgggagccgcttcgtcgagcggtaaccttcgtcagtcggaactcctctcagcaaactgcgaaatttgttttacgtttgtgtgtgctttccatttgattttcgaactggtgtgtgtggcagtggcgtcggtggaggacgccaagaaggacgtgctcgtggcgctctcccaaatcatcgatcccgacttcgggacggacatcgtctcgtgcgggttcgtcaaggacctggagattagcgaggccttggaagaggttaagttgaaggacacttgctgatgaagcctggatgcactgctcgaacatttggcttactttggtctccatttggctctgctttttcaggtctcgtttcgtctggagctgacgactcctgcctgcccgatcaaggacatggtgagtacagttcctgtgttgacgtgttcagttatctccgtggaactattcactctttatcttcagttgtctcaaacaaaatagcagtaactatattggttttgagataatagtatcggttaagcttatcattggcatctgatgagatagatgtataaatgtgaactgattggtttatactcctatctgtttgtaaaaatgctgtcctatcctgggttggaaaaacaatttgcggcaaaattgcatgaagacttgttttgctttgtagtttgaagagaaggcaaatgaggttgttgcagcacttccttgggtcaagaaggtcaatgttacaatgtctgcgcaacctgcacgaccagcatacgcaggggagcttccagaaggattgcagaagatttcgaatatcatagcagtttcaagctgcaaggcaagacctcaggataataataaatcagtcctttttagtagtaagtaactaaaaaacattttttcccagggaggagttggaaagtctacagttgctgtaaatcttgcatatacattagctggtatgggggccagggttggaatatttgatgctgatgtcttcggtccgagcttaccaactatggtttctcctgaaaaccggctgctagtgatggtaagctgattgaataattgtgttaacaaaaaattagtggttgcactaataatggtaaacagatttacctttagaacccagaaagcagaagtattcttccaaccgagtatttgggcgtcaagatggtgtcttttggctttgctggacaaggaagagctataatgcgtggtccaatggtttcgggagtgattaatcagttgctgaccactactgattggtatgcaaaagagatacttgacatctttatgaaggcatctgatgaacataataaagcagcccatttttaccagcttagcctttcgtagattcccaataatattattgggttccgttgaaaaaacttgactttttttcttcttttcataaaggggcgaactcgactaccttgtcattgacatgcctccaggaacaggagatatacacttaacactctgtcaggtggtacctctagcctgagtattgtacaaatcacacgtggtaacatcaaccatgcttgtaggcactgtgaaatttaacatgtctgaaacatcaggtagccccattgactgcagctgtcattgttaccacccctcagaagcttgctttcatcgatgttgcaaagggagttagaatgttttccaagctgaaggtgtgtaatcttcatatcactgttcattttaattgtaatctaccgtgcttactattcgtgcatcaatttgtttctgcttcatcttcatcttctttgtgaaggttccgtgcgttgcagttgttgagaacatgtgctacttcgatgctgatggaaaacgattttacccatttgggcaaggttctggagctcaggcaagaaaagttttgatgcacatttagcacattctcttgaatattttttgaattgcgtcagcattgcaattatttcaggttgtgcagcagtttggaatacctcacctcttcgatttgccgatacggccaactgtaagctcaatcccacctatcttgtacaaggataaaagtgagtgcaatgatcacagtttggtataatttacagctttcagcgtctggagatactggaattcctgaagtagtggctgatccacaaggggatgttgctaagacgtttcagaatcttggagtttgtgttgttcagcagtgtgctaaaatcagacaacagggtaagttagcagttcacaaattacaacctagaatatgtaaaagtagttcatacaatttattttcttggtgaattcgaactaaccaaaatttaaacaaaacgaagaaagaagtataccaataaatactgccagctttcttattcccaaaaaaaataaatactgccagcttttgttcaaaaaatgtattacagcaaaacagatatgtttctttttttaccaagtttttctcctgtaatgatgtgttaatctttttcattttgccagtttcaacagcagtttcctatgatagatcaattagagcaatccgagtgaaagtaccagattcagatgaagagttcttgttgcatccagcaacagtcagaaggaatgaccgatctgctcaaagtgtggtgggtataccttttcgccgtttaatgtgtattattctaacactggcatcgacttcaaatggcgtgtacagtgcttataattttcagaaactaaatcatgtagtctgtattttcagaaaccaatattttcacagttgcccttgttttgcacaaactaagtagttcttgtctgcaggacgaatggacaggtgagcagaaagtacaatatggtgatataccagaagacattgaacctgaagagatccgtcctatgggaaactacgcagtttctataacttggcctgatggtttttctcaggtaatgtaatacaaaataaagattatttcatgtacagtagacttccgaaattcatgtagatggattaaatggagatgaaatgaacatgaatctgattctctgcagatagcaccttatgatcaattggaaatgcttgagaggcttgtggatgttcctcgtgcaacaacagcagcagtctcttcatga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0719700, RefSeq:Os01g0719700