Os01g0723100

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0723100| Description = Senescence-associated family protein| Version = NM_001050640.1 GI:115439650 GeneID:4324670| Length = 1963 bp| Defin...")
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Gene Name

Os01g0723100

Description

Senescence-associated family protein

Version

NM_001050640.1 GI:115439650 GeneID:4324670

Length

1963 bp

Definition

Oryza sativa Japonica Group Os01g0723100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31911525..31913487

Sequence Coding Region

31911586..31912200,31912280..31912420,31912508..31912676,31912824..31912908,31913087..31913246

Expression

GEO Profiles:Os01g0723100

Genome Context

<gbrowseImage1> name=NC_008394:31911525..31913487 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31911525..31913487 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggctgctgcggcggcatgtcgtcgacgtcgagggcgccgagggggatccgggaggagacgctgctccgcgtcccgggcgcgtcggtgcacctgctcgacggcgccgagggccccgtcgagctcgcccggggggacctcgccgtcgtgcggatcgccaaggacggggtggccgtggccaccgtggcgcgcgtcggccgcggcctcgggtggccgatcacgagggacgagcccgtggtgaggctcgaccggctgcactacctgttcacgctcccggacagcacgggcggcggcggcggcggcggcggcggcgcgttgttcctcaactacggcgtctccttcgccgcgcccgacgacgcgctgctggcttcgctcgacgcgttcctcaaggccaacgcctgcttctccacgccttcttcgcccgcgccgtcgaggagctccgccaccaccaccaccaggccggcgccgacgacgacggcgacggcggacgggtactggaacgacttcgcgccgaggatggacagctacaacaacgtgctcgccaaggcgatcgccgccggcaccggccagctcgtgcggggcatcttcatgtgcagcgaggcgtacgccacccaggttcaacgcggagccgacctgattcgtcctcaagctaccggcagcgtgaccaaacgatccggcggcgcaggtggtggcggagcaagccgtactaccggccaaccggacgcgaagcgcggaggagtcaacaagagcctcaagagggtcaggaagctgtcggagatgacggagaagatgagccagtcgttgctcgacacggtcatcgcggtgacggggtccatggccgcgccgctgcttcgttcgaagcaagggaaggccttcctcgccaccgtcccaggggaggtcatcctggcctcgcttgatgctatcaataaagttatggacgcggtggaggctgctgagaggaggtcactcgctgccacatccaatgttgtctctggtgcagtgtcaagaaggtatggagagagcgcaggggaggcgacggaggatgcgttcgcgacggccggccacgccgtggggacggcctggaacctcttcaagatacggaaggccgtcacgccgtcgtcctccctcccagggaacatggtgaagagcgccgtcaggaacagaaaatga</cdnaseq>

Protein Sequence

<aaseq>MGCCGGMSSTSRAPRGIREETLLRVPGASVHLLDGAEGPVELAR GDLAVVRIAKDGVAVATVARVGRGLGWPITRDEPVVRLDRLHYLFTLPDSTGGGGGGG GGALFLNYGVSFAAPDDALLASLDAFLKANACFSTPSSPAPSRSSATTTTRPAPTTTA TADGYWNDFAPRMDSYNNVLAKAIAAGTGQLVRGIFMCSEAYATQVQRGADLIRPQAT GSVTKRSGGAGGGGASRTTGQPDAKRGGVNKSLKRVRKLSEMTEKMSQSLLDTVIAVT GSMAAPLLRSKQGKAFLATVPGEVILASLDAINKVMDAVEAAERRSLAATSNVVSGAV SRRYGESAGEATEDAFATAGHAVGTAWNLFKIRKAVTPSSSLPGNMVKSAVRNRK</aaseq>

Gene Sequence

<dnaseqindica>62..676#756..896#984..1152#1300..1384#1563..1722#gaatcgctcgccgactcgcgttttgtttgtcacttgtcactagtcacctagcagcttcggcatgggctgctgcggcggcatgtcgtcgacgtcgagggcgccgagggggatccgggaggagacgctgctccgcgtcccgggcgcgtcggtgcacctgctcgacggcgccgagggccccgtcgagctcgcccggggggacctcgccgtcgtgcggatcgccaaggacggggtggccgtggccaccgtggcgcgcgtcggccgcggcctcgggtggccgatcacgagggacgagcccgtggtgaggctcgaccggctgcactacctgttcacgctcccggacagcacgggcggcggcggcggcggcggcggcggcgcgttgttcctcaactacggcgtctccttcgccgcgcccgacgacgcgctgctggcttcgctcgacgcgttcctcaaggccaacgcctgcttctccacgccttcttcgcccgcgccgtcgaggagctccgccaccaccaccaccaggccggcgccgacgacgacggcgacggcggacgggtactggaacgacttcgcgccgaggatggacagctacaacaacgtgctcgccaaggcgatcgccgccggcaccggccagctcgtgcggggcatcttcatgtgcagcgaggcgtacgccacccaggtacgtgcttctgatcgatcactaacctttaacctcttctctgttcaatccgtagattttgattcagcctcgcgtgcaggttcaacgcggagccgacctgattcgtcctcaagctaccggcagcgtgaccaaacgatccggcggcgcaggtggtggcggagcaagccgtactaccggccaaccggacgcgaagcgcggaggagtcaacaagagcctcaagaggcaagtgatcagttaagctagcttaattttgcgtgaatttttactacttgtactgcatgatgctactcgtgttggtttgttcttcagggtcaggaagctgtcggagatgacggagaagatgagccagtcgttgctcgacacggtcatcgcggtgacggggtccatggccgcgccgctgcttcgttcgaagcaagggaaggccttcctcgccaccgtcccaggggaggtcatcctggcctcgcttgatgctatcagtgagtatcctgctgtcaatgcttcaccagcaagtgctcaacagatcgaggctttccaacgttaatcagaataaacgaattctcgttgatgctcggaataacgaagctgatgctcgaccatttgaattgcttgcttttatctggcagataaagttatggacgcggtggaggctgctgagaggaggtcactcgctgccacatccaatgttgtctctggtgcagtgtcaagaaggtaaggaaatccatatctgaaagactgaaaatcaggtgcagaggttgatccgcacgcttcaaatttcttggctatattcttccgtgtatatatagcagattctgcatcagcaaatttagcatcaattcagcattgggaacatcggttgtcaattagtagcttgtgctgtgtttcgcaggtatggagagagcgcaggggaggcgacggaggatgcgttcgcgacggccggccacgccgtggggacggcctggaacctcttcaagatacggaaggccgtcacgccgtcgtcctccctcccagggaacatggtgaagagcgccgtcaggaacagaaaatgacggcccgcccgtcttgcaactgcagagaacagcggcgtgtgctacaagccacctcgagtgtgtcgcgtaggctgatcatgtactgccaagttaaactctcctgcctcttgcatgttcagttgttcactacctgatgaagtaatcagggcataccaacattacaccttaagtactatacaaaatgtctcagtaacctgtgttgagctgctaaagatattcccatttgtgagtgcttgctacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0723100, RefSeq:Os01g0723100