Os01g0723400

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0723400| Description = Malic oxidoreductase family protein| Version = NM_001050642.1 GI:115439654 GeneID:4324717| Length = 5627 bp| Defini...")
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Gene Name

Os01g0723400

Description

Malic oxidoreductase family protein

Version

NM_001050642.1 GI:115439654 GeneID:4324717

Length

5627 bp

Definition

Oryza sativa Japonica Group Os01g0723400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31921862..31927488

Sequence Coding Region

31921862..31922016,31923097..31923217,31923302..31923376,31923465..31923616,31923691..31923796
,31923886..31923951,31924030..31924125,31924211..31924282,31924437..31924520
,31924696..31924794,31925429..31925476,31925574..31925627,31925725..31925823
,31925909..31925998,31926091..31926168,31926287..31926361,31926454..31926544
,31926870..31926998,31927089..31927177

Expression

GEO Profiles:Os01g0723400

Genome Context

<gbrowseImage1> name=NC_008394:31921862..31927488 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31921862..31927488 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>ggtctccacttgcccccctcaccctcaccctcaccctctccccctcgcgccgccggggcgaccaggggcggcttctccccgttagctttcccgcatcggcggggcccgccgcccccccgcccgccatgcgcgcccttcgctcccgcttccttccgtggttacaatttgctgagggatcctcgctacaacaaggggcttgccttcaacgaaagggagcgcgaaacgcactacctccgtgggcttctgccaccagcaatcgtatcccaggagctccaggaaaggaaaatcatgcataacatccgacaataccagctgcctctgcagaaatacatggctatgatggacctccaggaggggaatgagaggcttttctacaagctcctcattgacaatgttgaggagctacttcctgtcgtttacactccaacagttggtgaggcctgccaaaagtatggatccatatttagccgtcctcagggtctttatatcagcttgaaggagaagggaaagatccttgaggtgctaaaaaactggccagagaggagcattcaggttatcgttgttactgatggtgagcgaattttggggcttggagatcttggctgccagggaatggggatccctgttggtaagcttgccctttacactgctctaggaggagtgcgtccatctgcttgtttgccaatcacattggatgttggtacaaataacgaggcgctgctgaatgatgagttctacattggcttaagacaaaagagggccactgctcaggagtatgctgattttcttcatgaattcatgactgccgtgaaacaaaactatggggagaaagtactcattcagtttgaggattttgcaaaccataatgcatttgaactccttgcaaaatatggaacaactcaccttgtattcaatgatgatattcagggaacagcttccgtggtcctttctgggcttgttgcagcactaaaattagttggtggttcattgtcggagcacagttacctgttcctgggagctggagaggctgggacaggcattgcagaacttatagctctcgagatatcaagacagaccaaagcaccaattgaggagtgccgcaagaaaatatggcttgttgattcaaagggcttgattgtcagttcacgaaaggagacccttcaacacttcaagaaaccatgggcccatgagcatgaacctgttggaaatctcttagatgcagtcaaaactatcaaaccaacagtattgattggcacatctggaaaggggcaaactttcactcaggaggttgttgaagccatttcctcatttaatgagaggcctgtcatttttgccttgtccaacccaacatctcagtctgagtgcaccgctgaacaagcgtacacatggagcaagggccgcgcggtgtttgcaagtggaagtccatttgatccggtggagtatgatggcaaaatatacgtgcctggccaggcaaacaacgcctacatcttcccagggtttggccttggtgtggtgatgtctggtgcaatccgtgttcatgatgacatgcttcttgcagcttcggaagcactggctcagcaggtcacacaagagaatttcgacaagggccttacttatcctcccttctcaaacatcagaaagatctctgcccacattgcagccaacgttgcagcaaaggcatatgaacttggtttggcaagcaggcgccctcggccaaaggacctggttaagtatgcagagagctgcatgtacagcccactttaccgcaactaccggtga</cdnaseq>

Protein Sequence

<aaseq>GLHLPPSPSPSPSPPRAAGATRGGFSPLAFPHRRGPPPPRPPCA PFAPASFRGYNLLRDPRYNKGLAFNERERETHYLRGLLPPAIVSQELQERKIMHNIRQ YQLPLQKYMAMMDLQEGNERLFYKLLIDNVEELLPVVYTPTVGEACQKYGSIFSRPQG LYISLKEKGKILEVLKNWPERSIQVIVVTDGERILGLGDLGCQGMGIPVGKLALYTAL GGVRPSACLPITLDVGTNNEALLNDEFYIGLRQKRATAQEYADFLHEFMTAVKQNYGE KVLIQFEDFANHNAFELLAKYGTTHLVFNDDIQGTASVVLSGLVAALKLVGGSLSEHS YLFLGAGEAGTGIAELIALEISRQTKAPIEECRKKIWLVDSKGLIVSSRKETLQHFKK PWAHEHEPVGNLLDAVKTIKPTVLIGTSGKGQTFTQEVVEAISSFNERPVIFALSNPT SQSECTAEQAYTWSKGRAVFASGSPFDPVEYDGKIYVPGQANNAYIFPGFGLGVVMSG AIRVHDDMLLAASEALAQQVTQENFDKGLTYPPFSNIRKISAHIAANVAAKAYELGLA SRRPRPKDLVKYAESCMYSPLYRNYR</aaseq>

Gene Sequence

<dnaseqindica>1..155#1236..1356#1441..1515#1604..1755#1830..1935#2025..2090#2169..2264#2350..2421#2576..2659#2835..2933#3568..3615#3713..3766#3864..3962#4048..4137#4230..4307#4426..4500#4593..4683#5009..5137#5228..5316#ggtctccacttgcccccctcaccctcaccctcaccctctccccctcgcgccgccggggcgaccaggggcggcttctccccgttagctttcccgcatcggcggggcccgccgcccccccgcccgccatgcgcgcccttcgctcccgcttccttccggtattttcgctaaatctctctctctctcctcacacaccacactgtgctgcgtcgtcgtcactctctccggtcaaccttccccaatcagccacagccacagagccgggctggggggggggggggggggcgggcgtcattagctttacaataatcatcgccgccacttgtaaactaaaatatctcgcgcgctgcactaaccacgccagctttccgatcgataaatactactcccgcttccggtagctactagcacggcggtggcagtggcagtggcagtggcagtgggagttccagggacgtagagcagcgcggtgcggattgtgcggggaggcgcgggaggaggaggaggaggaggggaagatggagagcaccatgaaggggatccgcggggacaacgcgccgtgcgtgctggacctggacgacgcggcgacggtggggggcggcgtcggggacacctacggcgaggactgcgccaccgaggagcagctcgtcacgccgtggaccgtctccgtcgccaggtgagcgccggtgtggggagaaggggctcggtgtcggtaggagaggataagctttttgatccgcccatgcgctggggccacctggccctggggtttttgtttctcggtggggggttttgtcacttctggtgtagtgttgaacgtaattttagctttctttttttttcttttttgttttccgcatctggtgtatgtcgagcatattgcagcgcaaaagtaaagcttgtgcatgttgagcatattgcagcacaaaaagtagagtttcgataagatgcttcaggtttcgatcagatcaaacacatcgctatgtttcacgtttcaatcgcggaatgttgccaaattaatttggtctatggggagctgagatgaaaacagtgcgctattttggctagtcgttgccatcagaggatagggcagaatttggatcatctacagaagtgcgagatcacgcttagaaaaggagaatttggatacatgcttgaacaaagctattttttttagcttgatttggtgtccgaaaattttgactttttttttgtgtgtgtgtgtgtgcgcggggcagtggttacaatttgctgagggatcctcgctacaacaaggggcttgccttcaacgaaagggagcgcgaaacgcactacctccgtgggcttctgccaccagcaatcgtatcccaggagctccaggttcagtgatcctatttttttttctttaatgagccttttcatatttgttcagctatctgatccactatgctctaatcttattaggaaaggaaaatcatgcataacatccgacaataccagctgcctctgcagaaatacatggctatgatggacctccaggtgactttccttattgttcatagtatagcattacagctcatttgagttacgcagtttggttacactgttctttcaatgcatattgcaggaggggaatgagaggcttttctacaagctcctcattgacaatgttgaggagctacttcctgtcgtttacactccaacagttggtgaggcctgccaaaagtatggatccatatttagccgtcctcagggtctttatatcagcttgaaggagaagtaagtttctctacctgggttgttgtattgttttgagattcccgtgttcatgtgcatctgtaattttgctgcaggggaaagatccttgaggtgctaaaaaactggccagagaggagcattcaggttatcgttgttactgatggtgagcgaattttggggcttggagatcttggctgccaggtaactcagcatatgtgccttgaactattataacaaattatgataccacctcttaggatcttgtgttgattacaacgaattctatatagggaatggggatccctgttggtaagcttgccctttacactgctctaggaggagtgcgtccatctgctgtaagttgccatatccagtatcaaccctttttttgtcagactacctttaggctttagcatcaactaacattcctaaagtgtttgccaatcacattggatgttggtacaaataacgaggcgctgctgaatgatgagttctacattggcttaagacaaaagagggccactgctcaggttggacatttatatttgattctgactattttcctaactcgctctagttatggcctgaattaaattgtcatttttgtgccatcaggagtatgctgattttcttcatgaattcatgactgccgtgaaacaaaactatggggagaaagtactcattcaggtaacatgcctactaaaatggcttcatttagaaaccagaagaaagtatggaaacagaaaaacttgcaaatgtgaaatgactttcatctgatttgcctctgtttgaaaatcgccatatagtactgaagttgatctaaagactgtttgtcatgcagtttgaggattttgcaaaccataatgcatttgaactccttgcaaaatatggaacaactcaccttgtattcaatgatgatattcaggtattgttctactttactggatgcctgttaccctgctggggatggcattcattttacattgacgtcaatatccggagaatatagttaattgcttgtagcaacgaacttccattaaccttttttagccagtatgcagacataccaatattattttttactgctatatattttacagggaacagcttccgtggtcctttctgggcttgttgcagcactaaaattagttggtggttcattgtcggagcacagttacctgttcctgggagctggagaggtctctttctctctctctctccctccctctctctctctctctctctcacacacacacacacacacatcatttgtttgtgttactatgttaggcttagcgcattactatttctctgtttgggcaccaaagaggtggcattttccccttcgccacctccttcttaagtgaatttcaaataccttgtccatcttgttttagaaaaaaaaaaaggcatctgattgggtaatgctagattgcaagttatttgtggagctgcaatatctgaagtggacttgctagattaactgaaaagaactccaaatgccatcaattgtacaattcagagtctatcttagtgtagttatctgcttctttactgaccattttcatctattttataagttggtgctggtgcatccttcgtgcgacagttatttgcaattttgtatttaaaatactgtattatgcttattctatcaggataagttcttccatttttctaactatatatattttctcattatgagctatatagatattacacaatatatttgtggcatgtacttctcaatggcatttaattgactgtgtattcatcgatatagatttgacttacattttctcccaaacaatatcttcattcttgtgcttgcaggctgggacaggcattgcagaacttatagctctcgagatatcaagacaggtgatgcatcttttttttttttttttgggggggggggggggtcatttgctggcttgtacacatatctatatgacctaataattatttgcacatgcagaccaaagcaccaattgaggagtgccgcaagaaaatatggcttgttgattcaaaggttgaaaagaaccagatctccttgcttaatttcactgtttgggttcagaactttatttgttcctacttgctaactgtggatattaataaattgacagggcttgattgtcagttcacgaaaggagacccttcaacacttcaagaaaccatgggcccatgagcatgaacctgttggaaatctcttagatgcagtcaaagtatgaatacacccatgtaaaaattcattgcatttactatgaataactatgaaaggctctattctaactcaaatgcatcttccagactatcaaaccaacagtattgattggcacatctggaaaggggcaaactttcactcaggaggttgttgaagccatttcctcatttaatgaggtaaatttcaccatgtcaatttaatatttttgagtctgttgaaccactgaagttagcagctgatgtttttttttttttgcacaaattcctagaggcctgtcatttttgccttgtccaacccaacatctcagtctgagtgcaccgctgaacaagcgtacacatggagcaaggtatgatcgctatcagtaatgaccttgctttttttcttttctcggaatttgttatccctagtgcttactacaatgttgtcatgggcaatagttttgttataacaatctgaaataacagggccgcgcggtgtttgcaagtggaagtccatttgatccggtggagtatgatggcaaaatatacgtgcctggccaggtcttaacaataaacaccattgactttattgcaaagattttatcagttgcaactgttctggactaaaaatacgatcatggtctgtcatacaggcaaacaacgcctacatcttcccagggtttggccttggtgtggtgatgtctggtgcaatccgtgttcatgatgacatgcttcttgcagcttgtaagtgctccatagtccatactatataactaaagccacaagtaccttttctttttaccgagattacattgttctcgatgcagtactatttgcattagtccaaatcagtcacaaaatgaggtggtaagagtagagaaggaattcattcaaataattcattctgatcctacagtcaggaagaacaagtgataagcaagctgtaatgaattatttgaatgaattccttctagcgtaattccgcggattgattcatccttagatcttctttggcatatatgttgaactggcaagttaacactgatgatacattctgatcctggtacagcggaagcactggctcagcaggtcacacaagagaatttcgacaagggccttacttatcctcccttctcaaacatcagaaagatctctgcccacattgcagccaacgttgcagcaaaggcatatgaacttggtcagcatcctaatttatcttcacttcctcaaagataagtccatggttcctttttacagcttgcttatcacttgttcttcctgactgtaggtttggcaagcaggcgccctcggccaaaggacctggttaagtatgcagagagctgcatgtacagcccactttaccgcaactaccggtgaatctggtcatccggtatccggatctattccagtcatgtatatctatgaactgtttcctgcaaaatcttactacttgttcagtactgcacgctgtaattctgatgagtctaccggagttacttcaagcctttttttccccgtgtcgttcatgcctgtattgtaatatttccttttcgacgtgatgtgaagttccttgtatccagttaccttaagcatgggcatatgtattttcatcacaagaatgttaccgtcctagggatgggtaataaatgataaatctggaataaagtttctacagttcctttctcggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0723400, RefSeq:Os01g0723400