Os01g0723500

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Revision as of 04:57, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0723500| Description = Transcriptional factor B3 family protein| Version = NM_001185617.1 GI:297720368 GeneID:9268171| Length = 5604 bp| D...")
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Gene Name

Os01g0723500

Description

Transcriptional factor B3 family protein

Version

NM_001185617.1 GI:297720368 GeneID:9268171

Length

5604 bp

Definition

Oryza sativa Japonica Group Os01g0723500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:31929287..31934890

Sequence Coding Region

31929287..31929385,31929682..31930150,31934124..31934467,31934594..31934890

Expression

GEO Profiles:Os01g0723500

Genome Context

<gbrowseImage1> name=NC_008394:31929287..31934890 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:31929287..31934890 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgggggcgggagggaagaagaagtcgccgtgggcgtcgggggagaggcggccgcacttcttcaaggtgctcgtcggcgacttcaagcagcgcctgaaaatcccgccaaacttctgcaagcacatcccctgggaggagtcgaggaaggccaagggcctgaaggaggcgtccatggcggccaccctggaggggcccagcggccggacgtggctggtcgtcatccgccggacggccgagggcaccttcttcacctccggctggcccaagttcgtgcaggaccaggcgctgcgcgaactcgagttcgtcgtgttccgctacgacggcaacacgcgcttcaccgcgatggtgttcgacaggacggcgtgcgagcgggaggacctgatgggaggcggcggcggcgaccggccgcgcaagaaacggggtcgccctaggacggccgccgcctcgcgtgatgccgcgcggcccaagaaggattcggttgggaaggagatggtgacgtaccgcgcgtcgcctagtggtggccagccgttgcaaatcgtggactccagttggacaccggaaccaggatcaacggcggtcaagaacgaggaagacgccgacgagctcccagtgtgcgagctccccgcatcgtcggcgtctccgccgaggcacgtgcccgagggggctctggacgccgacggcggcgcggcgaggcgtggcgcggcgaagacgcggagcctccaggacgacctggccctcgccagcatcccgccgtccatccggcgctacaaggggtacgtgtcccgccgccgcgccgtcgccaccgccgagcggcagcgcgccacggagatcgcccacgcgttccggtccccgctcccctactgcgtcatccgcatgagcaccatgcacgtctactactccttcatgatgaggtttccgacggggttctcgaggcagcacctgccgcgggagaggacggacgtggtgctgcgagacccgggggggaaggtgtggtcggtgctgtacatcccgaacacgcgggaccggctgtcgcgcgggtggtgcgcgttcgcgcgcgggaactgcctcgaggaaggcgactactgcgtgttcgagctcgtcgccgcggccgagttccgggtccacatcttccgggtggtcgagccggccgtgccagcggtcaggctccggagagtcaccgtcacctgtggccgcggccccacgtag</cdnaseq>

Protein Sequence

<aaseq>MPGAGGKKKSPWASGERRPHFFKVLVGDFKQRLKIPPNFCKHIP WEESRKAKGLKEASMAATLEGPSGRTWLVVIRRTAEGTFFTSGWPKFVQDQALRELEF VVFRYDGNTRFTAMVFDRTACEREDLMGGGGGDRPRKKRGRPRTAAASRDAARPKKDS VGKEMVTYRASPSGGQPLQIVDSSWTPEPGSTAVKNEEDADELPVCELPASSASPPRH VPEGALDADGGAARRGAAKTRSLQDDLALASIPPSIRRYKGYVSRRRAVATAERQRAT EIAHAFRSPLPYCVIRMSTMHVYYSFMMRFPTGFSRQHLPRERTDVVLRDPGGKVWSV LYIPNTRDRLSRGWCAFARGNCLEEGDYCVFELVAAAEFRVHIFRVVEPAVPAVRLRR VTVTCGRGPT</aaseq>

Gene Sequence

<dnaseqindica>1..99#396..864#4838..5181#5308..5604#atgccgggggcgggagggaagaagaagtcgccgtgggcgtcgggggagaggcggccgcacttcttcaaggtgctcgtcggcgacttcaagcagcgcctggtgagtgcacgagtgccggttagccagcttttgtctggcatatgtgcacttagcttacacttgttgccatcgtgcgaaatatggcgatcacaattttggatcgggacgatggctagccaatactttgcgcagagagaattcgtcacgctagcatgcatgcatgcattttctgcaaagcgagctttgcatgcgttgcgtagtctcgaaacaatctgttatatgcaccatgcaagtctcgaaataatgtcatttgtgtatatatatatgcatcatgcatgcatgtgtgaataatgcagaaaatcccgccaaacttctgcaagcacatcccctgggaggagtcgaggaaggccaagggcctgaaggaggcgtccatggcggccaccctggaggggcccagcggccggacgtggctggtcgtcatccgccggacggccgagggcaccttcttcacctccggctggcccaagttcgtgcaggaccaggcgctgcgcgaactcgagttcgtcgtgttccgctacgacggcaacacgcgcttcaccgcgatggtgttcgacaggacggcgtgcgagcgggaggacctgatgggaggcggcggcggcgaccggccgcgcaagaaacggggtcgccctaggacggccgccgcctcgcgtgatgccgcgcggcccaagaaggattcggttgggaaggagatggtgacgtaccgcgcgtcgcctagtggtggccagccgttgcaaatcgtggactccagttggacaccggaaccaggtaagaaaagaaccactattatacagtatactccctccatgctagtaaaaaaaatcatttggaacaatgtttaaatcaaaccttaaaaatataaatcataaataactctcaagttgttgagtttgaaaatgtaaaaattacatgaatagatttgtcttgaaaaatactttcatcaaaatatacatatatcattttttaataaatattttcatagaaacaagaagttaaagttctgttttggagaccgtgtcgctgtccaaaacgatttcctttacggggtacggagggagtatatactgtctccgtcacatattacttgtcgctttgagttttttttataatgtttgatcattcgtcttattcaaaaaaattggaattattatttattttgttcgtgacttgttttattatcaaaaatactttaagtatgatttatctatttttatatttgcactaattttttaaataaaatgaatggttaaatgttacaagcaaaaggttaaagcgacgagtaatatgggacggaggtagtattaatttactccatccgtctcgcggtacagaatgttttggtttgtgtaactcggttgacaaatataaaagtatagtaatatatgcaacactgaattaataatttataaattctactagtaaatattcgtttcgtcttaaaagtgttgctgaatcctcctgtaaactttataaagttaactaaatttaaagaagtttgatttagatccaaaatgacaagatatgaaatgggaggagtagtgatctatttattatactataagattccccgcgcgttgtagcggaaattttagcagtaagataagtatgatatttatcacatatcgtagaacaaaaataatatatgtattttgcaccacaagcagaatacaacatcaaatcaaaataagaaggtttaacttggaggaaatgtggatcgtaaagaccatctctaattaaaggaaaagaaacgcaggattcaggataggaacttatatttcagaactaacaaataattactatccaaagaagaaatgttcagtacttgtgctggcagtgctgctatatagctaagcttcaaacataaagggctttagaacgacaatcataccttgtagaagatttgagaatgaccaatattaacaattcaaatcggtgaagggaaactttctttttccttttctcggagatcccaaattgctgcagtggtgtcaataatccaggcgtggcaggaaggatcaaatattctatcttgttgctagggaagttttggacgacatacacaacacaaagaaaagagtgcctaaatggcagagtgctatatagtggctttagtggggagaaaaaaaatgatagcaattgtctgataattaagccttctaattgtctgataattaagtttcatgcatatggcctcttagcttcttggatttatggacatattctgccgttttagaacaacgtagtaatggcgccagctacatacatgaacagtgggggatagatagcaactttgctcgtgcaaatgaatggcgtttaattgtaatccaacgactgtagctaaatgtaatgacgtggctaactcatagtgcagagaaatagtaattaatgttgttagtggggatgaactatataagatatatagatatagataatagtgtacatccattaatctatctatagctagctagcctccaaaagaaactctcccgttaaccacaaaaaagatatggtcattgatcatcatcagatgttgatgatgacaaatattgtaaactgcatgaagactctatcgtgttaatgcggaaaattaagttacactatgtataaataagatgtaatatgtttaatagaacaaaaaaggcttcctgtgttttatatagtttgcatatggttgcatatatagtgcgaggtgaatatattttatgtttaattgatactaatgaattttgacctaaaaatcattaagattgtatggttttacgagagaaggaagaagagacgatttaaaccatatgagttggctttcaaaatctatacttcttcaaaaagtagtagtagttgtatgtggtggtgagtgatgaatctgccaccaccccaaccaccacctccctattattttagaataaagaaatgacatgtggggctagaggacccacatgacaaccaccaattctctacttatgggaatggaaaaatgatagtgtgaggtcaaaaattcacatgtcggtaacaatttatatagaaattaaaagataatgtatataaaaataatggtaataactagttaatgatattttttttattaattagaacccctttgcaacacgtggataatacgctagtaatagaaattcaacgaggccagtgatttgccacttagacccgtctgtctaagagtttgctaataggagggcgcccttatggacatgcgtgtagtgtatgtgcatagtcatggagtgcatactctggttacaacaaaaaataaacattaataatatgtactctctccgtttcaaaatataactacttttagcccccaggatttgttccaaaatataacaacttctctatcaacattctcttcccaaccaatcacaaccattcactattcacttttatcactcacctccactactcatccaatcacaactttccaccattcacttctaattactttcttaataactgtgtcaaactttaaaacttcttatattctaggacggagggattacaaggcgcgagttgagctaattgggcacttaagaaagttcttgcgctacaaagatgattaagaataccatattatcataaccacgaattgtatcaagaatttgtgttaaataaatcgtaccattagataatttggtacaatgaattcatatattcccttcagttataaatatttaggccctgtttagttccaaaaacttttttccagaaacatcacatcaaatctttggatacatgcatgaaatattaaatatagataaattaaaaaactaattgcacagctaggaggaaatcgcgagacgaatcttttgagcctaattagtccatgattagccataagtgctacagtaacccacatgtgctaatgacggattaatttggctcaaaagattcgtctcgcagtttctaggcgagttatgaaattagttttttcatttgtgtccgaaaaccccttccgacatccggtcaaacgtccgatgtaacacctaaaaattttcttttcgcgaactaaacaagcccttaacgtttagggcaagtgggtaacttgaccatcatgtacaagacaagtttttcatacggttccacttccaaagtcgcaacatcactgaatttcctgccaagactccatttgaaagatgggcttgaagaacgaaggtgaagggaacagcctatatgagggtccaactactaaaccccacaaagagaaacatcccaggcccactcccactcccaccggcccgtgattggtacgtactccactttcgacgatatcaaatcatcaaatccctggacaaatttaccgatgtcgcacatcacgtcactactccctccgtcccaaaaaaaaaaaactcaatcctgggttttttttgggacgaagggagtatatgttaggcacgcagcctaatgctgcagaaaggcccgggtttgcgctgacagtgacatgacaaaattatattgaaccatgactgtgtttagttcagcgcaaagtttgtttgaaattgaaaatgatgtgactgaaaatttgtgtgtatgacagattgatatgatgaaaaaggactgaaatttggatcgaaactttggatctaaacacagcccatatatatatatatatatatatatatatatatatatatatatatagcttgtgcgatttcgttgccaactgttttaatttgttgttagtattacacaactatacgttactcaaaagctcctaagtactcttctgcaggatcaacggcggtcaagaacgaggaagacgccgacgagctcccagtgtgcgagctccccgcatcgtcggcgtctccgccgaggcacgtgcccgagggggctctggacgccgacggcggcgcggcgaggcgtggcgcggcgaagacgcggagcctccaggacgacctggccctcgccagcatcccgccgtccatccggcgctacaaggggtacgtgtcccgccgccgcgccgtcgccaccgccgagcggcagcgcgccacggagatcgcccacgcgttccggtccccgctcccctactgcgtcatccgcatgagcaccatgcacgtctactactccttcatgatggtgcgcgaacaactctactcgatcgatcgtatgtacacacacaacacctgaatcgtgtgacagcctgatgagcagattttgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgttaatatgcagaggtttccgacggggttctcgaggcagcacctgccgcgggagaggacggacgtggtgctgcgagacccgggggggaaggtgtggtcggtgctgtacatcccgaacacgcgggaccggctgtcgcgcgggtggtgcgcgttcgcgcgcgggaactgcctcgaggaaggcgactactgcgtgttcgagctcgtcgccgcggccgagttccgggtccacatcttccgggtggtcgagccggccgtgccagcggtcaggctccggagagtcaccgtcacctgtggccgcggccccacgtag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0723500, RefSeq:Os01g0723500