Os01g0727100

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Revision as of 04:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0727100| Description = Glycosyl transferase, family 8 protein| Version = NM_001050656.1 GI:115439682 GeneID:4324733| Length = 4328 bp| Def...")
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Gene Name

Os01g0727100

Description

Glycosyl transferase, family 8 protein

Version

NM_001050656.1 GI:115439682 GeneID:4324733

Length

4328 bp

Definition

Oryza sativa Japonica Group Os01g0727100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32067292..32071619

Sequence Coding Region

32067542..32067758,32067865..32067929,32069187..32069357,32069997..32070566,32070673..32070979
,32071082..32071362

Expression

GEO Profiles:Os01g0727100

Genome Context

<gbrowseImage1> name=NC_008394:32067292..32071619 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32067292..32071619 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgaaggtctacatcacgtcggcggcgccgctggctggcgaggcaacgaaggcgatggcgtcgccgccgtcgccgccgccgcaccagcaccagcaagcggcaacaaggcgcgggtgccggtcggctgtcgtgacggggctcctcgccggcgtgctcctcttccgcgccgcgctcctcaccatcgaggccggcgcatccctctgcccttccaccaccggatgcttggactggagggccggtctcggggactggctgtacggcggcagcggcgacgcgatggaggaattcatgaaggagtggaggagaggtcgcagggaggccagcctgttggatcccgtggtggtggaggcggcaccggattcgctggacggcctcatggcggagatggacaccatgctggcgtcctacgatcggctggacatggaagccgtggtgctcaagattatggccatgctgctgaaaatggatcggaaggttaagtcgtccaggatcagagccctgttcaaccggcacctggcctcgctgggcatcccaaagagcatgcactgcctcacactgcggcttgccgaggagttcgcggtgaactccgcggcccgctcgccggtgccgctgccggagcacgcgcctcgcctggccgacgcctcgtacctccacgtcaccatcgtgacagacaacgtgctcgccgccgccgtcgccgtggcttccgccgtcaggagctcggccgagccagcgaggctggtgttccacgtcgtcaccgacaagaagagctacgtgccgatgcactcgtggttcgcgctgcacccggtttccccggcggtggtcgaggtcaagggcctccaccagttcgactggcgcgacggcggtgccatcgcctctgtcatgaggacgatcgaagaggttcagaggagctcaatggagtatcaccagtgtgacgcgtcagttgtcagggaatacaggaggctcgaagcctccaagccaagcacgttctctcttctcaactacctcaagatccacctcccagagttcttcccggagctcgggagggtgatacttcttgacgacgacgtcgtggtgcgaaaggacctgaccgggctgtgggagcagcacctcggcgagaacatcataggcgccgtcggcgggcacaaccccggcgaagacggggtcgtctgcatcgagaagacgctcggtgatcacctgaatttcactgaccccgaagtgtcaaacgtactcgaaagtgcgagatgcgcgtggtcgtggggtgtcaacgtcgtcaacctcgacgcatggcgaagaacaaatgtcaccgacacgtaccagctctggctagagaagaaccgggagtcgggattcaggctgtggaagatgggctcgctgccgccggcgctgatagcgttcgacggccgggtgcaggcggtggagccgcggtggcatctgcggggcctcggctggcacacgccggacggcgagcagctgcagcgctcagccgtgctgcatttcagcgggccgaggaagccctggctggaggtcgcgttcccggagctccgggaactatggctcggccacctcaacagatcagacagctttctacaaggatgcggcgtagtcgagtaa</cdnaseq>

Protein Sequence

<aaseq>MKVYITSAAPLAGEATKAMASPPSPPPHQHQQAATRRGCRSAVV TGLLAGVLLFRAALLTIEAGASLCPSTTGCLDWRAGLGDWLYGGSGDAMEEFMKEWRR GRREASLLDPVVVEAAPDSLDGLMAEMDTMLASYDRLDMEAVVLKIMAMLLKMDRKVK SSRIRALFNRHLASLGIPKSMHCLTLRLAEEFAVNSAARSPVPLPEHAPRLADASYLH VTIVTDNVLAAAVAVASAVRSSAEPARLVFHVVTDKKSYVPMHSWFALHPVSPAVVEV KGLHQFDWRDGGAIASVMRTIEEVQRSSMEYHQCDASVVREYRRLEASKPSTFSLLNY LKIHLPEFFPELGRVILLDDDVVVRKDLTGLWEQHLGENIIGAVGGHNPGEDGVVCIE KTLGDHLNFTDPEVSNVLESARCAWSWGVNVVNLDAWRRTNVTDTYQLWLEKNRESGF RLWKMGSLPPALIAFDGRVQAVEPRWHLRGLGWHTPDGEQLQRSAVLHFSGPRKPWLE VAFPELRELWLGHLNRSDSFLQGCGVVE</aaseq>

Gene Sequence

<dnaseqindica>251..467#574..638#1896..2066#2706..3275#3382..3688#3791..4071#gcggtgatgcccgcaccgtgccatctctctctcttttttacttctcgggctttccttagtttccttcgttttcccacacgcccacgcgcggacgccgcgtacttagctagcaaggctagctagaagctcccatacttgcacgtacgctttcccattctcttttgcttaaaccgagctagagctttgctagctcagttcgtccatgagagcagcagcggcgggtcggcagcctcgcttgtagctagcgataatgaaggtctacatcacgtcggcggcgccgctggctggcgaggcaacgaaggcgatggcgtcgccgccgtcgccgccgccgcaccagcaccagcaagcggcaacaaggcgcgggtgccggtcggctgtcgtgacggggctcctcgccggcgtgctcctcttccgcgccgcgctcctcaccatcgaggccggcgcatccctctgcccttccaccaccggtaagttttcacttcgcacgcaccgaggccaccggcggctgcttggtgaattgcccattttcgtttgcgatatgatcatctctgacgcgattggccaatgctccaggatgcttggactggagggccggtctcggggactggctgtacggcggcagcggcgacgcgatggaggtgagtctttactggtcactggtggtgtgctagtgttaggccggcgcgtgcactgactgcaccttcgatcgtgcgactaacacagtcagagtgcgttaggaaacaggggtgacttttatgcgccggggttttgacatttgttttactacttttgcgcgcggcggggcaaagctgtagtacgggacgaaacacgccgttgggcacggagctcctcacgcggttggggcgatttttttttccgcatggttcggctcgctagcagtaagcgccattcacgggaaggggaatggaatgtcagggccgcgtcggcaacacgtcgcggcgttcctaccacgtgccccgcggccgcccacgctgacaggtggggccagtcgatccgatccagagtgctgcatgctctggattctcaattttttgttaaccactgtcacagtcggccgttgtcagctctcgcctctcggtcattggtcaatccattccgcccccagctacggctcaccggctgaattcaaatgcagaccagtaagccaagtaccacccactagtgttgttttgctcttggagaagtaccccaagttgaattacacaaaaaaatcgtgaaattagtagtactccagtacctttctcagtcaacttgtaccagaaaaacggcctaatccgacgaggagttatctatgcactggttggcgatttgcgcgacccttgccattggcatcattcctcgagggccctaccatagttggtggcggcttgggatattgtgttgccagccgctacggtgcccggcacttgtgacgtgctcgtgaggattctctcgcgctggtggcctgcgctccagctaggacatgctcgtaaagatggcgcccttgcgtttggagctacgtggccttttcagttccgactatacagcggcccttttggcccgtgaccgtgagcctgagccactagctattcatgaacgcgtacggtaggcataacccctgtggtttttagtgctctcgtgtcacattgtacatggactggacgcctaatgtacgggatccaatcaacgatgagctaatcagtactctagtactaatgaccattttaagcaagaccatgtactgtgacagtttgtgtttttcttcactgggtgtgactagttatatactatatccatgtttttctttttctttttttgagaacatactatatccatcttgattgagtttatgaatataagaatgctgattttcgatcgatgcgtggaatggtcaggaattcatgaaggagtggaggagaggtcgcagggaggccagcctgttggatcccgtggtggtggaggcggcaccggattcgctggacggcctcatggcggagatggacaccatgctggcgtcctacgatcggctggacatggaagccgtggtgctcaagattatggccatggtataaaacttatcagcccatattccgacgcgctttctctattacgaactttgctaatctttactgaactttttattagtcttgtatcatgcttgcatgttactggcacctttgctgaaacgagtgctttccacgcctaaagaccacacatcatatggtccatgtgtcttgcatcctgccttgaaattagagaagcggaacgtatggtcatgcatgctctccactaaatctccggttaaacatgcaaacgtcacttttttaggcgtgtccagttgaaatgactgcaacttgaagcgttctttggctgtgtttacttcctgaaattagaaagaagtttggggaaaattgttagtttggaaaaaaagttaagagtttatatgtgtaggaaagttttggatgtgatgtgatataatggaaagttgggggttggggggaagtttggtgtgaactaaacagggtctcatttgtaggagtaggattagattcttttgtagctagggttaggattagaccgtgttgacacttgacactacaatccaaaaatgaattatcgagctttgatccattaatagtactcctatattgcaagttgcaacaactatattcgtcgattttttattggggataatcttgaagcagctgctgaaaatggatcggaaggttaagtcgtccaggatcagagccctgttcaaccggcacctggcctcgctgggcatcccaaagagcatgcactgcctcacactgcggcttgccgaggagttcgcggtgaactccgcggcccgctcgccggtgccgctgccggagcacgcgcctcgcctggccgacgcctcgtacctccacgtcaccatcgtgacagacaacgtgctcgccgccgccgtcgccgtggcttccgccgtcaggagctcggccgagccagcgaggctggtgttccacgtcgtcaccgacaagaagagctacgtgccgatgcactcgtggttcgcgctgcacccggtttccccggcggtggtcgaggtcaagggcctccaccagttcgactggcgcgacggcggtgccatcgcctctgtcatgaggacgatcgaagaggttcagaggagctcaatggagtatcaccagtgtgacgcgtcagttgtcagggaatacaggaggctcgaagcctccaagccaagcacgttctctcttctcaactacctcaagatccacctcccagaggtataaatcaaggcaacaattggacaaagatcacgcctacatgcctacatttgcctgacattaatttgacgtctggagatatatctgatgcgttttgcttgagcagttcttcccggagctcgggagggtgatacttcttgacgacgacgtcgtggtgcgaaaggacctgaccgggctgtgggagcagcacctcggcgagaacatcataggcgccgtcggcgggcacaaccccggcgaagacggggtcgtctgcatcgagaagacgctcggtgatcacctgaatttcactgaccccgaagtgtcaaacgtactcgaaagtgcgagatgcgcgtggtcgtggggtgtcaacgtcgtcaacctcgacgcatggcgaagaacaaatgtcaccgacacgtaccagctctggctagagaaggcaattagctctctgattctcttgaacatggatgccgttttcttggttacagtactaatgacaaaacatttttttcccctgtgactgtcgcgtgcaatgcagaaccgggagtcgggattcaggctgtggaagatgggctcgctgccgccggcgctgatagcgttcgacggccgggtgcaggcggtggagccgcggtggcatctgcggggcctcggctggcacacgccggacggcgagcagctgcagcgctcagccgtgctgcatttcagcgggccgaggaagccctggctggaggtcgcgttcccggagctccgggaactatggctcggccacctcaacagatcagacagctttctacaaggatgcggcgtagtcgagtaacacagtaaacgacacagcagcaattgagctgggaaagagtatataagtatagacgatttggttcgagatctccatgtggcgcagagctgggttcatgtcttcatgaggagagggaagtaggtgctgccttcagtctctcctcgctctggctctacgtgcaacatgttcagtgacacagtgtagaattgtatagtgacgatgtatataagggctgttatctatttcttggttatagaactaaatgaaaaactagatgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0727100, RefSeq:Os01g0727100