Os01g0729400

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Revision as of 04:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0729400| Description = Leucine-rich repeat, typical subtype containing protein| Version = NM_001050669.2 GI:297597550 GeneID:4323927| Lengt...")
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Gene Name

Os01g0729400

Description

Leucine-rich repeat, typical subtype containing protein

Version

NM_001050669.2 GI:297597550 GeneID:4323927

Length

1365 bp

Definition

Oryza sativa Japonica Group Os01g0729400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32162905..32164269

Sequence Coding Region

32162905..32164269

Expression

GEO Profiles:Os01g0729400

Genome Context

<gbrowseImage1> name=NC_008394:32162905..32164269 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32162905..32164269 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcagcctccgtcgctgtgttcgtgtgcctcctgtccgtggccgcggcggcggcgtccatggacccggcggagagggaggcgctgttcctcgtcatggaggcggtctcgtctgaccgggactggcgctccgagagccccgacccttgcggcgcgccgtggccggggctggagtgcaagccggcagccggcgacgccgcggcggcgctgctgcgcgtcacgcggctcgacttcggcgtggagcccaacccgtcgtgcaaggacacggccgcgttcccgccgctggtgttctcctccctgccccacctccagtccctcttcttcgtcggctgcttcaagaacccggcggccaacacgtccctcgtcctgccgcccgccgccaacctctcgacctccagcctgcagcagctcagcatcagggccaacccgtccctgtccggcgtgatgccgccgcagctggcaacgctcaggtcgctccaggtgctcaccatctcccagaacggattgatccgcggcgagatcccgcagggcatcggcgagctcacgtcgctggtgcacctcgacctcagctacaactcgctcaccgggccggtgccgagcgagatcagcgagctgaagagcttggtcggtctggacctgagctacaactcgctgtccggcgccatcccgagccggatcggtgagctgcggcagctgcagaagctggacctgagctccaacaatctcaccggcggcatcccggtcagcatcgccaacctgagctcgcttaccttcttggcgctgagcagcaatggcctgagtggtcacttccctcctggactctccggcctccgaaacctccagtgcttgatcatggacaacaacccaatgaatgtccccttaccttccgagctcggtggtctccctcgtcttcaagaactccggctggccggctccggctactcgggacagatacccgcggcgtttggtcagctggcgagcttgacgacgctgtcactcgaagacaacaacctcaccggagaaatccctccggtgctgaccaggctgacaaggatgtatcacctgaacctgagcaacaatgggctgggcggcgccgtgcctttcgacggcgcgttcttgcggcggctcggccagaacctcgacctgagcggcaacgcggggctgtgcctggatgaccggatggtcgtgcggggcgtcggcgtcggcgtcggcgcctgccacgccggcggcggcggtgatggcccgttggcgcccggaggagttacgggggcagcagcaacggtgaggggttccgtggacggttacccgtttcggcttctcggccatgcctgcttggtcgtggcctgtctggtttctttgaattag</cdnaseq>

Protein Sequence

<aaseq>MAASVAVFVCLLSVAAAAASMDPAEREALFLVMEAVSSDRDWRS ESPDPCGAPWPGLECKPAAGDAAAALLRVTRLDFGVEPNPSCKDTAAFPPLVFSSLPH LQSLFFVGCFKNPAANTSLVLPPAANLSTSSLQQLSIRANPSLSGVMPPQLATLRSLQ VLTISQNGLIRGEIPQGIGELTSLVHLDLSYNSLTGPVPSEISELKSLVGLDLSYNSL SGAIPSRIGELRQLQKLDLSSNNLTGGIPVSIANLSSLTFLALSSNGLSGHFPPGLSG LRNLQCLIMDNNPMNVPLPSELGGLPRLQELRLAGSGYSGQIPAAFGQLASLTTLSLE DNNLTGEIPPVLTRLTRMYHLNLSNNGLGGAVPFDGAFLRRLGQNLDLSGNAGLCLDD RMVVRGVGVGVGACHAGGGGDGPLAPGGVTGAAATVRGSVDGYPFRLLGHACLVVACL VSLN</aaseq>

Gene Sequence

<dnaseqindica>1..1365#atggcagcctccgtcgctgtgttcgtgtgcctcctgtccgtggccgcggcggcggcgtccatggacccggcggagagggaggcgctgttcctcgtcatggaggcggtctcgtctgaccgggactggcgctccgagagccccgacccttgcggcgcgccgtggccggggctggagtgcaagccggcagccggcgacgccgcggcggcgctgctgcgcgtcacgcggctcgacttcggcgtggagcccaacccgtcgtgcaaggacacggccgcgttcccgccgctggtgttctcctccctgccccacctccagtccctcttcttcgtcggctgcttcaagaacccggcggccaacacgtccctcgtcctgccgcccgccgccaacctctcgacctccagcctgcagcagctcagcatcagggccaacccgtccctgtccggcgtgatgccgccgcagctggcaacgctcaggtcgctccaggtgctcaccatctcccagaacggattgatccgcggcgagatcccgcagggcatcggcgagctcacgtcgctggtgcacctcgacctcagctacaactcgctcaccgggccggtgccgagcgagatcagcgagctgaagagcttggtcggtctggacctgagctacaactcgctgtccggcgccatcccgagccggatcggtgagctgcggcagctgcagaagctggacctgagctccaacaatctcaccggcggcatcccggtcagcatcgccaacctgagctcgcttaccttcttggcgctgagcagcaatggcctgagtggtcacttccctcctggactctccggcctccgaaacctccagtgcttgatcatggacaacaacccaatgaatgtccccttaccttccgagctcggtggtctccctcgtcttcaagaactccggctggccggctccggctactcgggacagatacccgcggcgtttggtcagctggcgagcttgacgacgctgtcactcgaagacaacaacctcaccggagaaatccctccggtgctgaccaggctgacaaggatgtatcacctgaacctgagcaacaatgggctgggcggcgccgtgcctttcgacggcgcgttcttgcggcggctcggccagaacctcgacctgagcggcaacgcggggctgtgcctggatgaccggatggtcgtgcggggcgtcggcgtcggcgtcggcgcctgccacgccggcggcggcggtgatggcccgttggcgcccggaggagttacgggggcagcagcaacggtgaggggttccgtggacggttacccgtttcggcttctcggccatgcctgcttggtcgtggcctgtctggtttctttgaattag</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0729400, RefSeq:Os01g0729400