Os01g0730900

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Revision as of 04:58, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0730900| Description = Chaperonin clpA/B family protein| Version = NM_001050681.1 GI:115439732 GeneID:4324428| Length = 2265 bp| Definitio...")
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Gene Name

Os01g0730900

Description

Chaperonin clpA/B family protein

Version

NM_001050681.1 GI:115439732 GeneID:4324428

Length

2265 bp

Definition

Oryza sativa Japonica Group Os01g0730900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32250688..32252952

Sequence Coding Region

32250700..32252568

Expression

GEO Profiles:Os01g0730900

Genome Context

<gbrowseImage1> name=NC_008394:32250688..32252952 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32250688..32252952 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccgacgcccgaccgtgccggtgccgtcggcgccaccgcgcggggtggtggtggtggtggcgggcacctccgcggccacgcgcacctgaccaactgcatccacttacgccaccaccacgcgcacgggggcggcggtggaggcggaggggcgtcgtcgtcggggaggaggaggagccccacgtccgtcgcgtcggcggcgctgatgcgcgacctcctcgcgctgcagcgctcgcggtcgctccgtgacccgtccacgcgccgctccgttgagtcatcctccaaggtggcagccgacccggacgccgacaccgacgaagacgacgccgatctcccgccgaagtcccggcgcagcgcctcgacgaccggggcgctcaagacgctcctcgaccagctcgctgagaaccctcaacccaagcaggttcgtcgcccgccgcgccgctttaaacgcggcgctggccgccgcgctggcgccgccagtaaggccccagatcgctcggcagccgccgccgccgccgcggcggcgctctcagtcaactccagctcccaggaggccgtctgcggcaacaagtacctcttccgcgatggcgaggacggcctcgacgagctgcagcagcatgtgccgccgcaggactcgcgcaacgtctgcggcattccgtggaactggtcgcgcctccaccaccgcggcaagtctattctcgacatggccggccgcagcctcgcctgcggcctatccgatcccaagtcagcggcgggccgcaaatccgaagccggcgccggcgcctcgcgtggccacctcaacggctcgcactcgcttttcccagtcaagtccgagaggctggcctcctcgaccagctcggactccgacgcgttgcctctgctcgtcgaggcggccgccaccggtgcgcgtaacggcggcatcggtgggagctactcgggcgagcttggaattttctccaaccagaccagcgagatggagtccgacctcctgtcggaggggcggtcggggcacaagtctcgtggctcgcagcacggccgcggacggcaccggagcctgacgcagaagttcgcgcccaagaccttcaaggacgtggtcgggcagagcttggtggtgcaggcgctgtcgaacgccgtcctgaggaggaagatcgggctggtatacgtcttctacggcccgcacggcacagggaagacgtcgtgcgcgcgcgtcttcgccaaggcgctcaactgccactcccccgagcacccgaggccctgtgactcgtgcacctcgtgcatcgcgcacaatctcggcaagagcaggagcgtgatggagattggccccgtcggcaacatcgacatggacggcatcgttgatgtcctcgacaacgtcatgctttcgccggcgccttcgcactacagggtgtttatatttgatgactgcgatacgctgccagccgacacttggagcttaatctcgaaagtggtggaccgggcgccccgccgcgtggtgttcatcctcgtcagtcccaacctcgaccttcctcatataatcctatcgagatgtcagaagttcttctttcccaagttgaaggagtgcgacattgttaacactttgcaatggatttcgaccagcgaaagtttagatgttgatagggatgcactgaagttaattgcatcccgttcagatggatcattgagggatgctgagatgactcttgatcagctgagtttgctggggcagagaatttccttatctcttgtccaagaacttgtaagatatctctcaagcttaatattactccctttctgctttttttttttttggaaaaccaaattatacttctgtatctgctgtcaatatcgtattaccccatctgggcatgaatag</cdnaseq>

Protein Sequence

<aaseq>MPTPDRAGAVGATARGGGGGGGHLRGHAHLTNCIHLRHHHAHGG GGGGGGASSSGRRRSPTSVASAALMRDLLALQRSRSLRDPSTRRSVESSSKVAADPDA DTDEDDADLPPKSRRSASTTGALKTLLDQLAENPQPKQVRRPPRRFKRGAGRRAGAAS KAPDRSAAAAAAAAALSVNSSSQEAVCGNKYLFRDGEDGLDELQQHVPPQDSRNVCGI PWNWSRLHHRGKSILDMAGRSLACGLSDPKSAAGRKSEAGAGASRGHLNGSHSLFPVK SERLASSTSSDSDALPLLVEAAATGARNGGIGGSYSGELGIFSNQTSEMESDLLSEGR SGHKSRGSQHGRGRHRSLTQKFAPKTFKDVVGQSLVVQALSNAVLRRKIGLVYVFYGP HGTGKTSCARVFAKALNCHSPEHPRPCDSCTSCIAHNLGKSRSVMEIGPVGNIDMDGI VDVLDNVMLSPAPSHYRVFIFDDCDTLPADTWSLISKVVDRAPRRVVFILVSPNLDLP HIILSRCQKFFFPKLKECDIVNTLQWISTSESLDVDRDALKLIASRSDGSLRDAEMTL DQLSLLGQRISLSLVQELVRYLSSLILLPFCFFFFWKTKLYFCICCQYRITPSGHE</aaseq>

Gene Sequence

<dnaseqindica>385..2253#agtcagtgacaccgccgcccccgtcgccgagccgcggatccgcttcccccgcgccgtactctatcccttcctgccccggcgacgcgggcgcgagccccgaaagcaccgcccgttcctacacccggcacgagcgcgaggccactcgccacccaccctctcctcccagttctcctcccctactcggctactcggtcgcggctctctctctcccttcccgtgaaatcctccagggatccaaccaaaaaggcgaaatctccgaaccataccgccataattcgcacgcacacgcacaccacgcaccagcccaaccgacgcccaaatggcgtagcgtttcgccggagctctcctcgcatctcactgccgctccgtgctgcggggaaagcaatgccgacgcccgaccgtgccggtgccgtcggcgccaccgcgcggggtggtggtggtggtggcgggcacctccgcggccacgcgcacctgaccaactgcatccacttacgccaccaccacgcgcacgggggcggcggtggaggcggaggggcgtcgtcgtcggggaggaggaggagccccacgtccgtcgcgtcggcggcgctgatgcgcgacctcctcgcgctgcagcgctcgcggtcgctccgtgacccgtccacgcgccgctccgttgagtcatcctccaaggtggcagccgacccggacgccgacaccgacgaagacgacgccgatctcccgccgaagtcccggcgcagcgcctcgacgaccggggcgctcaagacgctcctcgaccagctcgctgagaaccctcaacccaagcaggttcgtcgcccgccgcgccgctttaaacgcggcgctggccgccgcgctggcgccgccagtaaggccccagatcgctcggcagccgccgccgccgccgcggcggcgctctcagtcaactccagctcccaggaggccgtctgcggcaacaagtacctcttccgcgatggcgaggacggcctcgacgagctgcagcagcatgtgccgccgcaggactcgcgcaacgtctgcggcattccgtggaactggtcgcgcctccaccaccgcggcaagtctattctcgacatggccggccgcagcctcgcctgcggcctatccgatcccaagtcagcggcgggccgcaaatccgaagccggcgccggcgcctcgcgtggccacctcaacggctcgcactcgcttttcccagtcaagtccgagaggctggcctcctcgaccagctcggactccgacgcgttgcctctgctcgtcgaggcggccgccaccggtgcgcgtaacggcggcatcggtgggagctactcgggcgagcttggaattttctccaaccagaccagcgagatggagtccgacctcctgtcggaggggcggtcggggcacaagtctcgtggctcgcagcacggccgcggacggcaccggagcctgacgcagaagttcgcgcccaagaccttcaaggacgtggtcgggcagagcttggtggtgcaggcgctgtcgaacgccgtcctgaggaggaagatcgggctggtatacgtcttctacggcccgcacggcacagggaagacgtcgtgcgcgcgcgtcttcgccaaggcgctcaactgccactcccccgagcacccgaggccctgtgactcgtgcacctcgtgcatcgcgcacaatctcggcaagagcaggagcgtgatggagattggccccgtcggcaacatcgacatggacggcatcgttgatgtcctcgacaacgtcatgctttcgccggcgccttcgcactacagggtgtttatatttgatgactgcgatacgctgccagccgacacttggagcttaatctcgaaagtggtggaccgggcgccccgccgcgtggtgttcatcctcgtcagtcccaacctcgaccttcctcatataatcctatcgagatgtcagaagttcttctttcccaagttgaaggagtgcgacattgttaacactttgcaatggatttcgaccagcgaaagtttagatgttgatagggatgcactgaagttaattgcatcccgttcagatggatcattgagggatgctgagatgactcttgatcagctgagtttgctggggcagagaatttccttatctcttgtccaagaacttgtaagatatctctcaagcttaatattactccctttctgctttttttttttttggaaaaccaaattatacttctgtatctgctgtcaatatcgtattaccccatctgggcatgaatagaaaatattagct</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0730900, RefSeq:Os01g0730900