Os01g0743400

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Revision as of 04:59, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0743400| Description = Similar to Tryptophanyl-tRNA synthetase (Fragment)| Version = NM_001050753.1 GI:115439876 GeneID:4326551| Length = 6...")
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Gene Name

Os01g0743400

Description

Similar to Tryptophanyl-tRNA synthetase (Fragment)

Version

NM_001050753.1 GI:115439876 GeneID:4326551

Length

6093 bp

Definition

Oryza sativa Japonica Group Os01g0743400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:32826029..32832121

Sequence Coding Region

32826310..32826444,32826589..32826678,32826863..32826944,32827036..32827082,32827662..32827718
,32827956..32828021,32828125..32828146,32828229..32828341,32828491..32828562
,32829427..32829531,32829640..32829729,32830092..32830133,32830379..32830466
,32831755..32831874,32831970..32832022

Expression

GEO Profiles:Os01g0743400

Genome Context

<gbrowseImage1> name=NC_008394:32826029..32832121 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:32826029..32832121 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgagccgcacgctcctctcccacatcctccaccgcccgccgccgctcctcgcgtcgaggggtggtgggcgaggaggagcgctcccgtcccgcctccgcactctccgactcaactgcagcgtggctgaagcgactgcctccggcgacgaggcgcctgctcctccggctaggaagaaaagagtagtttctggtgtacagccaacaggattggtacaccttggaaattatcttggtgctattaagaattgggtttcacttcaggatctatacgagacattatttttcattgtggacttgcatgcgattacgttaccatatgaagcaccacagttgtcaaaagcaacaagaagcactgctgcaatatatctggcttgtggcattgacagttcaaagtctcatgtccgtgctcatgttgagttgatgtggcttctgagttcttctactcctattggttggctcaacagaatgatccaattcaaagagaagtcacgcaaggcgggtgatgaaaatgttggagtggcacttttgacttatcctgttttaatggcttctgacattctcctgtaccagtccgatctggtgcctgttggtgaagatcagacacaacatttggaattaactcgcgaaatcgctgagcgtgtaaataatctatacggtggaaggaaatggaagaaaatgggagggagaggtggttcactatttaaggttcctgaagcccttatacctccagcaggggctcgtgttatgtccttaaccgacggtctctccaagatgtcgaagtctgctccttcagatcagtctcgtattaaccttcttgatccaaaagatgttatcatgaataagattaagcgctgcaaaactgactcgttcccaggcttggaatttgacaacccagagaggcctgaatgcaacaatcttctctcgatctaccagattattacagggaaaactaaagaggaagttatcagagaatgcgaaaatatgaactgggggtcgttcaaaacaactcttacagatgcattgattgatcatctgcaacctatccaggtccgctacgaggagataatgtctgatcctggttatttggatggtgttctcttagaaggatcaggaaaagctgctgagatagcagacatcaccctcaacaacgtataccaagccatgggtttcttgcgcagatag</cdnaseq>

Protein Sequence

<aaseq>MSRTLLSHILHRPPPLLASRGGGRGGALPSRLRTLRLNCSVAEA TASGDEAPAPPARKKRVVSGVQPTGLVHLGNYLGAIKNWVSLQDLYETLFFIVDLHAI TLPYEAPQLSKATRSTAAIYLACGIDSSKSHVRAHVELMWLLSSSTPIGWLNRMIQFK EKSRKAGDENVGVALLTYPVLMASDILLYQSDLVPVGEDQTQHLELTREIAERVNNLY GGRKWKKMGGRGGSLFKVPEALIPPAGARVMSLTDGLSKMSKSAPSDQSRINLLDPKD VIMNKIKRCKTDSFPGLEFDNPERPECNNLLSIYQIITGKTKEEVIRECENMNWGSFK TTLTDALIDHLQPIQVRYEEIMSDPGYLDGVLLEGSGKAAEIADITLNNVYQAMGFLR R</aaseq>

Gene Sequence

<dnaseqindica>5678..5812#5444..5533#5178..5259#5040..5086#4404..4460#4101..4166#3976..3997#3781..3893#3560..3631#2591..2695#2393..2482#1989..2030#1656..1743#248..367#100..152#cgtcgtctccttcgtcctccacttccccctcccacccaaagacgcgcagccaaatccgacgcgtgcggcggtgcgacgccggccggggtgggggacgccatgagccgcacgctcctctcccacatcctccaccgcccgccgccgctcctcgcgtacgccgcgcgctccgccgtgctccgagacctagcggctgcttctgctttgcttccgagtccctaactttcctccctgttgtttggcttcgcaggtcgaggggtggtgggcgaggaggagcgctcccgtcccgcctccgcactctccgactcaactgcagcgtggctgaagcgactgcctccggcgacgaggcgcctgctcctccggctaggaagtaagcccctggccgcctagtgttcggcgtaatgcgtctggtaggaagaggattgcggcaggtttctgtggtattttgttgttatgcgatggcgtagcctatgatgtataagtaagcgtttgctctggttcaaggctagtatgcgtgagaagtcacggatgaaattctgtaaggcttgtagcttgactgtggtaggaccagcttgtgatgtaatgcgcctgtagggtgttgtaatgagtgagtacagaattactgaggtgttgggaggggctaagaatggcaatgcaggaattgaattgctgttgaagcctgcagttcacttgctgctcttagtgtatatacttgtttgttagaatacttaactggtgttggatgaagcaagctacccataccatttgatctgaattcatttatttttctctactagacactagttgttaaattaaccgtcacttaatttttttcgtgcttgaaatgactcgatgataaattccacagaaaaattgtacatatcctagtatccaacaggctaaagtgaacttattttttgcgcaccaaggaagagagcatgccatcacagctcgcttctcttggtgtgcacaaaatgaaggtgtactcagttgactgattgtttttgtatttacaacttccacaattggtgcctcatatacaaattcagtgttcatttcatgtagtatcaagaaacaatgacattttttcagtccgatgaatatcttgatcctaagttagtttacactgtcaaattaattagtttcttcatgatcttatatatacacttgtttgcactgctcaaagtcatgaaaatattattgatggctagtgtgaagccagaatagcaaaaatagctattttggatatgtttctcatagggaatatttttagcaagtatgaacatataatgcataaggtaatcaagaacttttgattacattgcatttttttcatgatgcatcttttttcatgttggctgtttaattgtatttggatcaaatttattactcttattttatagttattattatagtcatccgtttgcagtgtgcttccaaagcaattgtttttatgtattataaggtttcatgagaaagaatgcagtttctttgcccaagttccatagtagcatctattcccacgggtctactagtcgtagttgtgattttcttcttcttttttttttcagataacaaagttctggcctagtcctgattaaaatatttatacgcgtttcactaatttgaacatctatatttatctctactgactgcaggaaaagagtagtttctggtgtacagccaacaggattggtacaccttggaaattatcttggtgctattaagaattgggtttcacttcaggtagtggtttgagaactgcatcttattattctttaattttgatggtaataatctcaaaagaaaatttttcagaaaccatgaagctagtgataaataatcaatctgtagctcagtaacaaggcaacctcaaattctgacattgttcatctaattgagatgcatttgagagctaagctaacttattgactgataatacacactttatctgtgatacttgacatcttatgcatagaaattccttgcaggatctatacgagacattatttttcattgtggacttgcatgcggtaagttctatctgacctcttggcatcctaccaaaaaaataatatttatattgtttgtacaaggtgtcacttattttgtacttttatcttttccttggtcaaattagtatgtttcattttcctttaacacaagctgctacatatttgtgtaatatgtggtgtccatctttcaccaatgttatttatggtaaccaaagtgttcatgatgtatatccaaattgccgagttaccttgcaggatcaagcaagtggttcatgctcatgtctgatttgtttgtagttcatattgcaattttttttttgtctttacgattcattttgtggtcctttgtaagcttatcacgttgtttaaaatgtctgcagattacgttaccatatgaagcaccacagttgtcaaaagcaacaagaagcactgctgcaatatatctggcttgtggcattgacagttcaaaggtctgcttcacatatttacattatatgatgatgtttgttgcaggtgcccttgtggagctgaatgttttatgttgttttgtgtctttacaggcttctatatttgtacagtctcatgtccgtgctcatgttgagttgatgtggcttctgagttcttctactcctattggttggctcaacagaatgatccaattcaaagagaagtcacgcaaggcggtgcgtcattcgctgtatgacagcttcaccatcatcttttgtttgagctgaattccttttcatattacataagggtctagaaaatgcaacagctcaattcacaagagcacatgttttcaacatttccgagattgaatatttgatgattccataacactgcctgctcaacagatatgatatcatgtagttaaaaaactgttctgcaccagtaatattcacatggtgtgttccctacttaattttaataccctatcaaaccagaggaagggaaagcattacataaaaatatcttttagtgtatgccttctacttgtacaccactaccatatgattagcgtaacagcatttttgaggcagtagtcatgtgaagatcgtccatagttctagtttgtaactttcacactggacgcattaactcttattaatagatcataggcacagataaataccattctaacattagattctttgcttgggtgtaacatcacttatctatcagttggctttcctatgttctgaacaatgtttggtcctcaagattgcttacctgattcagttaaaaaaaaaaagattgcttacctgactgacaccaaatgatattcatgcatctcccctgatttctaaattactagtagaccacctctgtcattcctgaatgtgatgtgtagtgcttctaaaagtttgaacctctggcattgccattttactggagcatttattccacaatattaggaatcatgtggtgcagtttcttttttctgcgtgcaaaaccctcaactccttatatcatggtgttgtactgtttaatccgtcctattttggcaaatttttattttgttgggtttatttttttcttatttatagggtgatgaaaatgttggagtggcacttttgacttatcctgttttaatggcttctgacattctcctgtaccaggtaaatattactcgtggctattatttttctgggttgtattctcagtgatgtgtagaagctaatattaatagatgtagtttaacaattcaactttgttatggttctgtttctctcctttctatgatgccaataatagctaatgattgcagtccgatctggtgcctgttggtgaagatcagacacaacatttggaattaactcgcgaaatcgctgagcgtgtaaataatctatacggtggaaggaaatggaagaaaatgggagggtgagaaaattatattattttattccacttttttgtgtaaataatctattgtaacgattcttttttgtatttgttcttgcaggagaggtggttcactatttaaggtgtgtgccatattatttatatatggttcagcatccattttataccctcggaagtcagaactgaactttgttttgcttattatactttctttttgtttattaggttcctgaagcccttatacctccagcaggggctcgtgttatgtccttaaccgacggtctctccaaggtagttagccatactcattatcattttaatcctgatcacaaaaaatgaaactactaggacttttttgttattaaattacttattgaagtgtcattacaccactagtattgatgctcattcattaacatataaacaataacttgcagagctgattccaggcatctatattttatactttctgctcagtgtgctgtatatctctgccatactgacctttgttctgtttattcatgttagatgtcgaagtctgctccttcagatcagtctcgtattaaccttcttgatccaaaagatgtaagggcaccaagaattgaattccctgatgtgtttcgtaaatatagtgcataactaatatcaaattttattacgctagcacatggtagaaggtgcatttttgtgggataagttgccaacaaacatgaagtaatacagaccagtctattagaagatgatgtaaatttcttttcctaggttcttggcatcgcactttctctaagacagcacagacttcagatctttaacctgagcccgttagaaggcctcttgtatttgtgaaccaacttcccaccagttatgaactctgactgaatgcacccatttagttgtaacagtctatcagaaatcccaaagatttttttttcctcggcaaaagtcttttacctgagcctggtctagccttgtgattgaaaaatcgtttcccacatttgtgaactctgattggatgcacccattcgcttgtaagatgaaattttacacaaaaataaaaatctgggcctagatactaggtaggtcatgtttccatctaccagggaccatgcttatgttgtttgttctgcatctggatttatcctgacagttgtctgtgttttgcaggttatcatgaataagattaagcgctgcaaaactgactcgttcccagggtctgtagtctgtgacctctcacacgctctcacacacatatgtagcctttggtacataagaaactcattcatttgaccttgtacctttcagcttggaatttgacaacccagagaggcctgaatgcaacaatcttctctcgatctaccagattattacagggaaaactaaagaggtggccaatctttacatgcatgctttgcaaacctaaccaaccagagcgtgaagcagggtcacctgcacatgatggtttctttcgtgtccagtccagcgtcatgttttcttgttgacgatgacaagataattttcctagttcactatccaagaagttgatcgtttcaataattttattttgacaggaagttatcagagaatgcgaaaatatgaactgggggtcgttcaaaacaactcttacagatgcattgattgatcatctgcaacctatccaggtattccaatcccaggaaacgttctgatagcacagctcattgcttaccataattattgtacttgataccgtggtctgctaatcatttttttctgggtcgagtaatcaatttcgtttctacatctccctcttttcacccgtctaggtccgctacgaggagataatgtctgatcctggttatttggatggtgttctcttagaaggatcaggaaaagctgctgagatagcagacatcaccctcaacaacgtataccaagccatgggtttcttgcgcagatagcatgcgcttcaaccatccggaacatttcaaagattttttacgaggtcaaaaagttttgttcggtctgtgttactttgttccccttaccattggccttaagattgtttttatgcacatattggccttactagatttacaagagctccattctccaaattttataggaatatcaatcgttttgcttgatgttacgtagtagcctctttgtttctggctctacaaaaacctgtatggtccattaaatttctcatcttaatgacactgatttctttgaagttttg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0743400, RefSeq:Os01g0743400