Os01g0748800

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Revision as of 05:00, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0748800| Description = PEBP family protein| Version = NM_001050777.1 GI:115439924 GeneID:4325551| Length = 2159 bp| Definition = Oryza sat...")
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Gene Name

Os01g0748800

Description

PEBP family protein

Version

NM_001050777.1 GI:115439924 GeneID:4325551

Length

2159 bp

Definition

Oryza sativa Japonica Group Os01g0748800, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33099210..33101368

Sequence Coding Region

33099210..33099413,33099536..33099597,33099628..33099759,33099892..33099929,33100413..33100460
,33101133..33101368

Expression

GEO Profiles:Os01g0748800

Genome Context

<gbrowseImage1> name=NC_008394:33099210..33101368 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33099210..33101368 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtctggtgtgccaactgtggagcccttggttttggctcatgtcatacatgacgtgttagatccatttagaccaactatgccccttagaataacatacaacgataggttacttctggcaggtgctgagctgaaaccatctgcaactgtgcataaaccaagagtagatattggtggcaccgacctgagggtgttctacacattggtactggtggatccagatgctccaagcccaagcaacccatcactaggggagtatttgcactatctcagtgggatacatagacaccccgaggtcatggttgtggacatcttctgggtgggacagagttcctgtgatgcaacgtcccacctgacgtggtcactgacatgtggacccgtaggtggtggggatcacatgatggtgatagatatcccaggaacaactggagtcaactttatccccaaaaacaacataaaagatgcagccattaatgagcctaaacgtcaagacctcatgctttatgaaagaccggaactgagatatggtatccaccggatggtatttgtgttattccgacaacttggcaggggaaccgtttttgcaccagagatgcgacacaacttccattgtagaagctttgcgcaacaataccatctggacattgtggccgctacatatttcaactgccaaagggaagccggctctggtggaagaaggttcaggtccgagagttcttaa</cdnaseq>

Protein Sequence

<aaseq>MSGVPTVEPLVLAHVIHDVLDPFRPTMPLRITYNDRLLLAGAEL KPSATVHKPRVDIGGTDLRVFYTLVLVDPDAPSPSNPSLGEYLHYLSGIHRHPEVMVV DIFWVGQSSCDATSHLTWSLTCGPVGGGDHMMVIDIPGTTGVNFIPKNNIKDAAINEP KRQDLMLYERPELRYGIHRMVFVLFRQLGRGTVFAPEMRHNFHCRSFAQQYHLDIVAA TYFNCQREAGSGGRRFRSESS</aaseq>

Gene Sequence

<dnaseqindica>1..204#327..388#419..550#683..720#1204..1251#1924..2159#atgtctggtgtgccaactgtggagcccttggttttggctcatgtcatacatgacgtgttagatccatttagaccaactatgccccttagaataacatacaacgataggttacttctggcaggtgctgagctgaaaccatctgcaactgtgcataaaccaagagtagatattggtggcaccgacctgagggtgttctacacattggtaaagcaaagacctatatgcttccatgttggaacatgttctaaatgttgataatgcaactccattacacaagaaaaaataatatactaaacttgtttcttctacttttacatatgcaaaaggtactggtggatccagatgctccaagcccaagcaacccatcactaggggagtatttgcactagtaagccatttataaatttgtcttttccagtctcagtgggatacatagacaccccgaggtcatggttgtggacatcttctgggtgggacagagttcctgtgatgcaacgtcccacctgacgtggtcactgacatgtggacccgtaggtggtggggatcacatgtcagtgaccacggccctctgaatttacgtaagaggatctcaatcccttcagtgacctagtcccccttcctctatccccccctctatctactgattgatgtccttgtttaacatatcttatgttgtgtgtaggatggtgatagatatcccaggaacaactggagtcaactgtatgcatagcatctgttagcaaatttaatttcatcgtaatcttttagattaaaaacaacaattcctaattttcttagatgtgttcattgccccataatcaacaaaagtacatattaattgttacaataaatagttcgtatcttactgaattgctatatgatagccgactttatagcaattcggtaagaaacaaaattcattgaagaagcactctatagccaatggctagtaaccatgagatatggagttcatgaatattaaaaagaaatgctaaaatgaactatcagggagaaggttagaaacaaatttaaactaaatccatgcctacaaagctacaacatgtcaacaatgctagctacttgcataggaaagcttacctaacatgtgtaacatatttgctaaatccctgcctagctaccggagctttgcagtttagcaaatatgttacattaagtcattaactttgccgcttatgtcaatagttatccccaaaaacaacataaaagatgcagccattaatgagcctaaacgtaaggaaacaagtgaaaagctaccatatggcaggaagagtactaaataattatcggaacaagttgattcttgaacccaagaacaagaagaagactatgttcaacgtgtaagtgctttattcaccacacttttttttagcttaatattgattcctagatttttggggtctaaagatgactatctacaaaaattcagaattgtgtgttgataaaatggcatacacaactccctgaaaagtcacatactaaatgagattaatatttcatattcacttcatctatcaagtttatatatattgttgaggggtagtggcatcaacacagtgttacagctaggagctacatattccctagcttaagactaaaagtataagttaaatatagctaaatcaaacacctaacatattttgtgctaggctaagcccaacttccatatagaagttcaagtttcatagggaggagacgacatgttatggaacatttaaaatagtaaaggtttaaaagctaaggttcacccaaatagacttcaaaatgatttgacaaacgaaattgggggatcctgaagaaaagacgaatctgcatactatagtagtgcatagcagttatgtcaattggaaaaaaaaaatacaaattgatttcgaatatagatgaaatatcataaaactcttgcaggtcaagacctcatgctttatgaaagaccggaactgagatatggtatccaccggatggtatttgtgttattccgacaacttggcaggggaaccgtttttgcaccagagatgcgacacaacttccattgtagaagctttgcgcaacaataccatctggacattgtggccgctacatatttcaactgccaaagggaagccggctctggtggaagaaggttcaggtccgagagttcttaa</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0748800, RefSeq:Os01g0748800