Os01g0758300

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0758300| Description = Similar to Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC 4.1.1.31) (PEPCase)| Version = NM_001050836.1 GI...")
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Gene Name

Os01g0758300

Description

Similar to Phosphoenolpyruvate carboxylase, housekeeping isozyme (EC 4.1.1.31) (PEPCase)

Version

NM_001050836.1 GI:115440042 GeneID:4325309

Length

5698 bp

Definition

Oryza sativa Japonica Group Os01g0758300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33615180..33620877

Sequence Coding Region

33615384..33615680,33615995..33616381,33616589..33617587,33617672..33617826,33618282..33618372
,33618454..33618557,33618640..33618862,33619003..33619087,33619329..33619552
,33619679..33619720,33620551..33620718

Expression

GEO Profiles:Os01g0758300

Genome Context

<gbrowseImage1> name=NC_008394:33615180..33620877 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33615180..33620877 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgcgcaatgcggcggacaaggggacgtccatcgacgcgcagctgcggatcctggcgcctaagaagctctcggaggacgacaagcttgtggagtacgacgcgctgctcctcgatcgcttcctcgacatcctccaggatctgcatggggaggacatcagggagacggttcaagaatgctatgaattagctgctgagtatgaaagtaagattgcgtatcgtaggaggataaaactgaagaagggtgattttgctgatgaaaactctgctacaactgaatcaaactttgaggagaccctaaaaaggcttgttggtgagcttaagaagtcccctcatgaggtatttgatgctctcaagaatcaaacaatcgacctggtcctgacagcacatccaactcagtcagtcaggaggtcgctgctacaaaagcatggcaggataagaagttgtttaacaaaactttatgcaaaagacataactccagatgagaagcaggaactcgatgaagcacttaagagagagatccaagccgcctttagaacagatgaaattcggcgagcacctcctacaccacaggatgaaatgcgtgctggaatgagttattttcatgagacaatatggaagggtgtacccaagtttttacgtagggttgatactgcccttaagaacattggcataaacgagcgagtgccctataatgctcctcttattcaattttcttcttggatgggtggagaccgtgatggaaatccaagagtcacaccagaggttacaagggacgtatgcctgttagctagaatgatggctgctaacttatactatgcacagatagaggatctgatgtttgagctatctatgtggcgctgtagtgatgaactacgtgtaaaagctgatcagttacaccgttgcgcaaagaaaaacacaacaaagcactatatagagttctggaaacaagttcctccgagtgaaccctatcgtgtaatactgagcaatgtcagagataagttgtacaatacacgcgagcgagcacgccatttattagccagtggattttctgaaattcctgacgaagcaacattcactgatgttgagcagttcttggagcctcttgagctctgttacaggtctctctgtgcctgtggtgataattctattgcagatggcagtcttcttgactttctacggcaagtgtccacatttggactatcccttgttagacttgatattaggcaagaatctgaccgacatactgatgttatggatgccataactcaataccttggaattggatcctatcgtgaatggtcagaggagaaacgccaagaatggcttctgtcagaactcaatggaaagaggccattatttggtcctgaccttccccagacggatgaaattgctgatgccctagatacttttcatgtgatagcagaactaccctatgatagctttggtgcatatgtaatatccatggcaacagctccttcagatgttctagcagttgagcttctgcaacgtgaatgtcatgtgaagaagccactgagagttgtgccattgtttgaaaaactagcagatctggaagcagcaccagcagctcttgcccgacttttctctgttgactggtacagaaataggatcgacggaaagcaggaagtaatgattgggtattcagattctggaaaagatgctggccgtttctctgcagcttgggaactgtataaagctcaagaggagcttattaaagttgctaagcagtttggggttaagttgactatgtttcatgggcgaggtggaactgttggaagaggtgggggtcctacacaccttgctatactgtcacaacctccagataccattcatggatcacttcgtgtgactgttcaaggtgaagtcattgagcaatcttttggagaggagcatttgtgttttaggacacttcaacgttttacatctgctactcttgagcatggtatgcatccaccaatttcaccaaagccagaatggcgtgctttgatggatgaaatggccgctgttgctacaaaagaataccggtccattgtcttccaagaggcacgatttgttgaatatttccgccttgcaacaccagagttggaatatggtaggatgaatattggaagtaggccatcaaaacgaaagcctagtggaggcattgaatcacttcgtgcaattccttggatctttgcttggacacaaactcgattccacctaccagtgtggcttggttttggcgcagcgttcaagcatgtcttgcagaaggacatacgcaatcttcagatccttcaggagatgtacaacgaatggccatttttcagggttacaatagacttggttgagatggtgtttgctaagggtgatcctggtatagcagctctgtatgacaagttgctagtttctgaggatttgtggccatttggtgctcgtcttagagcaaactatgaagaaacaaagcaacttcttctacaggttgctggacacaaagaccttctggagggagatccttacttgaggcagagactgcgtatccgtgattcctacatcacagcgctgaatgtttgccaagcttgcacgctaaagcgtatcagggaccctggcttccatgtaagcccccgagctcacctctccaaggacataatggactcagggaagccagccgctgagcttgtgaagctgaacacaacaagcgagtacggcccaggcctcgaggacactctcatcctgaccatgaagggcatcgctgctggtatgcagaacactgggtga</cdnaseq>

Protein Sequence

<aaseq>MARNAADKGTSIDAQLRILAPKKLSEDDKLVEYDALLLDRFLDI LQDLHGEDIRETVQECYELAAEYESKIAYRRRIKLKKGDFADENSATTESNFEETLKR LVGELKKSPHEVFDALKNQTIDLVLTAHPTQSVRRSLLQKHGRIRSCLTKLYAKDITP DEKQELDEALKREIQAAFRTDEIRRAPPTPQDEMRAGMSYFHETIWKGVPKFLRRVDT ALKNIGINERVPYNAPLIQFSSWMGGDRDGNPRVTPEVTRDVCLLARMMAANLYYAQI EDLMFELSMWRCSDELRVKADQLHRCAKKNTTKHYIEFWKQVPPSEPYRVILSNVRDK LYNTRERARHLLASGFSEIPDEATFTDVEQFLEPLELCYRSLCACGDNSIADGSLLDF LRQVSTFGLSLVRLDIRQESDRHTDVMDAITQYLGIGSYREWSEEKRQEWLLSELNGK RPLFGPDLPQTDEIADALDTFHVIAELPYDSFGAYVISMATAPSDVLAVELLQRECHV KKPLRVVPLFEKLADLEAAPAALARLFSVDWYRNRIDGKQEVMIGYSDSGKDAGRFSA AWELYKAQEELIKVAKQFGVKLTMFHGRGGTVGRGGGPTHLAILSQPPDTIHGSLRVT VQGEVIEQSFGEEHLCFRTLQRFTSATLEHGMHPPISPKPEWRALMDEMAAVATKEYR SIVFQEARFVEYFRLATPELEYGRMNIGSRPSKRKPSGGIESLRAIPWIFAWTQTRFH LPVWLGFGAAFKHVLQKDIRNLQILQEMYNEWPFFRVTIDLVEMVFAKGDPGIAALYD KLLVSEDLWPFGARLRANYEETKQLLLQVAGHKDLLEGDPYLRQRLRIRDSYITALNV CQACTLKRIRDPGFHVSPRAHLSKDIMDSGKPAAELVKLNTTSEYGPGLEDTLILTMK GIAAGMQNTG</aaseq>

Gene Sequence

<dnaseqindica>5198..5494#4497..4883#3291..4289#3052..3206#2506..2596#2321..2424#2016..2238#1791..1875#1326..1549#1158..1199#160..327#gcattggccgttcggatcgcggtggcgcttcgtgaaggtgttgggtttcgccggattggaggctgaattggtgtacgctggctcctcgtggggtattaatctgcggttttggtgttgcaggtgggggagaagggggaaaaggagtcggctttcggggagatggcgcgcaatgcggcggacaaggggacgtccatcgacgcgcagctgcggatcctggcgcctaagaagctctcggaggacgacaagcttgtggagtacgacgcgctgctcctcgatcgcttcctcgacatcctccaggatctgcatggggaggacatcagggagacggtaaatgatcccccgatcgctccatgccataatgcattttggtttctccttatttttctcttgttgatctgggtggggtgagtactgcatgctcgaagatcgctttgtgcgcaaatcggaggtggtttggccacttatcttaaggcattttggatttgtgtgtttcactgattttattctctgcatgttatattatttgcatgttttatgcgctttggtagtggaaatgttatttttttaaaaaaaacatagtgtcaaatcctttcttctgttgtcatctccgttttcctggaattgtactctcgtatgcaactcatgttttagccagggagtagattgccatgctgttcaaagtagtagctatgcaaagatgggcggatcgcttgctgtcattgcgactttccgatggtccagtggaattacgcccctttatttgaggaatggggtcttgttataaccttttgttattgttgatatgttgcagtctgtgaacaaatgtgtcacgatttgttaatggtgtatagttttccatacttctaccttcatcttgtttctgtatgttgttctacatgatttcactgtgcagtttcgacatcattgagttgtctggacacgtgttggctaatccagtcaagcaatctataaaactatgaggcctgcgagtgttctgctagtatcattgagtttttgtgtcatctgtttgctataccgttgcgctgattttttttaatgaatagcttgattctttcaatttctgcaatataatgagctttcttcaattaaacatctataatgtgttcaaaattttgcacttctgttggtatatgtaggttcaagaatgctatgaattagctgctgagtatgaaagtaaggttgaccccaaacagctggatgcaattgggaatgtgttaactcgtttagatcctggagactccattgtgatgacgaagtcattctcacacatgcttatcctggcaaacttggctgaggaggtccagattgcgtatcgtaggaggataaaactgaagaagggtgattttgctgatgaaaactctgctacaactgaatcaaactttgaggagaccctaaaaaggcttgttggtgagcttaagaagtcccctcatgaggtatttgatgctctcaagaatcaaacaatcgacctggtcctgacagcacatccaactcagtcagtcaggaggtcgctgctacaaaagcatggcaggttagtttcaatttttgcacaaccaaaataaatatagccaataaaagggcatttgaaatgagtggaatgcaactgcattgcatcctgcattgtctttagttgttaagtataatatttgttcaatgcactagagaagttcagttcactaagaatgcttgctagatgcaaggtttgtcggattcgacaaatctatctttcaagtgttgaacaaaatataaggttttcactttcctatatgcaggataagaagttgtttaacaaaactttatgcaaaagacataactccagatgagaagcaggaactcgatgaagcacttaagagagaggtgatttcctttttgtaggagcttggattatgagtggcacaagaccactatagtgattatttcaacaatcagcaagatttgtcatacatcaaaaatatatttatatgattctaattccttatattttttcttatgttcagatccaagccgcctttagaacagatgaaattcggcgagcacctcctacaccacaggatgaaatgcgtgctggaatgagttattttcatgagacaatatggaagggtgtacccaagtttttacgtagggttgatactgcccttaagaacattggcataaacgagcgagtgccctataatgctcctcttattcaattttcttcttggatgggtggagaccgtgatggtatgttacatctatcatatcatgtttgcaacatagttaattaattgtgaaattatggttttaatattgatgtggactacaggaaatccaagagtcacaccagaggttacaagggacgtatgcctgttagctagaatgatggctgctaacttatactatgcacagatagaggatctgatgtttgaggtaaaaataataggttgtactatttaaaggatatatgctgtattgatgtttgatctcacacaaaattttgaccacctgcagctatctatgtggcgctgtagtgatgaactacgtgtaaaagctgatcagttacaccgttgcgcaaagaaaaacacaacaaagcactatataggtatgtatcacgtatggaatcattacagtttagttctgcacaccttatttctattataagtggccttatttatcatccccttccaaataggtttaccaaattagtcttcaccccataattaatataattattacgtatgttaccgataatcatcatgaggattctcgaaggattaaactttaatgaaaattcatcatctaaatcatttaataataagaaaaacataaaaggataagtcccacatgattaccgtggcagtttcttgcctctttttttttcatttctttcatgtggttaatttttggagtcctacatgtgaactttagaacataccactagcattggtcccaaattgttccacgttagctttactgtgtttttccctttcctttttttacaactgtgatatattaggtggagtgaaatgcatgctgatatgcttctcttgaatgcagagttctggaaacaagttcctccgagtgaaccctatcgtgtaatactgagcaatgtcagagataagttgtacaatacacgcgagcgagcacgccatttattagccagtggattttctgaaattcctgacgaagcaacattcactgatgttgagcaggtacataggctaagatacaaaaaacttgcttactatgctatacgttttggttgtccttctggttgaaggtttcttcttttgcagttcttggagcctcttgagctctgttacaggtctctctgtgcctgtggtgataattctattgcagatggcagtcttcttgactttctacggcaagtgtccacatttggactatcccttgttagacttgatattaggcaagaatctgaccgacatactgatgttatggatgccataactcaataccttggaattggatcctatcgtgaatggtcagaggagaaacgccaagaatggcttctgtcagaactcaatggaaagaggccattatttggtcctgaccttccccagacggatgaaattgctgatgccctagatacttttcatgtgatagcagaactaccctatgatagctttggtgcatatgtaatatccatggcaacagctccttcagatgttctagcagttgagcttctgcaacgtgaatgtcatgtgaagaagccactgagagttgtgccattgtttgaaaaactagcagatctggaagcagcaccagcagctcttgcccgacttttctctgttgactggtacagaaataggatcgacggaaagcaggaagtaatgattgggtattcagattctggaaaagatgctggccgtttctctgcagcttgggaactgtataaagctcaagaggagcttattaaagttgctaagcagtttggggttaagttgactatgtttcatgggcgaggtggaactgttggaagaggtgggggtcctacacaccttgctatactgtcacaacctccagataccattcatggatcacttcgtgtgactgttcaaggtgaagtcattgagcaatcttttggagaggagcatttgtgttttaggacacttcaacgttttacatctgctactcttgagcatggtatgcatccaccaatttcaccaaagccagaatggcgtgctttgatggatgaaatggccgctgttgctacaaaagaataccggtccattgtcttccaagaggcacgatttgttgaatatttccgccttgtaagtattctttttttaataacttcagtttttgttttatgcttataaaaatactgttcattttaaaccttttatgctgtcttgaaatagctatcttgaaattgcaacttcactctgtagtcaccttcataaatttgttattttgctaatgattattctaatggtctgtataaataatctcaattttgcttctttgctgtcaaataggcaacaccagagttggaatatggtaggatgaatattggaagtaggccatcaaaacgaaagcctagtggaggcattgaatcacttcgtgcaattccttggatctttgcttggacacaaactcgattccacctaccagtgtggcttggttttggcgcagcgttcaagcatgtcttgcagaaggacatacgcaatcttcagatccttcaggagatgtacaacgaatggccatttttcagggttacaatagacttggttgagatggtgtttgctaagggtgatcctggtatagcagctctgtatgacaagttgctagtttctgaggatttgtggccatttggtgctcgtcttagagcaaactatgaagaaacaaagcaacttcttctacaggtgattttctaagacgttttatccatttatataccgctagatagtataattgcctccaattgctggtgtttttgctggcaactggttggtaatgttttccttcaatttaccaagctgtatatcctgcatttgtctgactaaatgatcaagcatcttttatatattggcaataattaagctccagatacttctagaaaatgctgcacagaaatgtatctccaaattagtgtctaaaaaacatatttatcactagtcccgaactactgatctttttttttaactatatctgcccactcactgctatgtgaactcaggttgctggacacaaagaccttctggagggagatccttacttgaggcagagactgcgtatccgtgattcctacatcacagcgctgaatgtttgccaagcttgcacgctaaagcgtatcagggaccctggcttccatgtaagcccccgagctcacctctccaaggacataatggactcagggaagccagccgctgagcttgtgaagctgaacacaacaagcgagtacggcccaggcctcgaggacactctcatcctgaccatgaagggcatcgctgctggtatgcagaacactgggtgaagtagaactggttcgttctgatggtgtgttatggtgtcatgaattagtgtagtttgcacctctatgcaatcactatttgcagtttgcacctctgaactctatatgtaaataaggggatgctaagcaacgtataactaagactggttatatccatggatattacctgtttagcatgttatatatcgaactcttatgctgttcacc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0758300, RefSeq:Os01g0758300