Os01g0759900

From RiceWiki
Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0759900| Description = Similar to Permease 1| Version = NM_001050848.1 GI:115440066 GeneID:4325616| Length = 3212 bp| Definition = Oryza s...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0759900

Description

Similar to Permease 1

Version

NM_001050848.1 GI:115440066 GeneID:4325616

Length

3212 bp

Definition

Oryza sativa Japonica Group Os01g0759900, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33732686..33735897

Sequence Coding Region

33732686..33732823,33732955..33733055,33733214..33733289,33733415..33733474,33733567..33733751
,33734213..33734309,33734392..33734478,33734569..33734627,33734698..33734789
,33734888..33734965,33735051..33735211,33735552..33735764

Expression

GEO Profiles:Os01g0759900

Genome Context

<gbrowseImage1> name=NC_008394:33732686..33735897 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33732686..33735897 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>accggcatcaacacgctgctgcagtcgctgttcgggacgcgcctgcccacggtgatcggcggatcctacgcgttcgtggtcccgataatggccatcatacaggactcatcgctcgccgccatacccgacgaccacgagaggttccttcagaccatgagggcgatacagggggcactcatcgtgtcctccagcattcagatcatcctcggctacagccagctgtggggcattttctccagattcttcagcccgttggggatggcgccagtggttgcattgctcgggtttggccttttcgaaagaggattccctgtggttgggagatgcgttgaggttggacttccaatgttaattctgtttgtcgtgctttctcagtatctgaagaatgtacagataagagatattccaatactggagaggttctccctgttcatctgcatcgcgttggtttgggcctatgctcaaatcctcactgcaggtggcgcgtataagcatagccctgaggtcactcagatcaactgccgcactgaccgtgccaatctcatctcttccgcgccatggattaagatcccttttccactacaatggggcgcaccaactttcagtgccggtcaatcctttggtatggtatctgctgttctggtatcgctagtagagtccacggcttcttacaaagctgcggctcggcttgcaagtgctactccacctccagcacatatcctcagtagaggcattgggtggcagggaattggtatccttcttgatgggctatttggaacgggtactggctccaccgtgtcagtggagaatgtcgggttgttaggatcaacgaggatcgggagccgacgagttatacagatctctgccggcttcatgatcttcttctccatgctaggaaaatttggagcattgtttgcttccatcccatttaccatctttgcggccgtgtactgcgtcttgtttggactagttgcggcagtggggctctccttcttgcagtttactaacatgaactccatgcgcaacctctttatcgtcggtgtctccatctttcttggcctatctgtgcccgaatactttttccggtacagcatggccgctcagcgtggccctgcgcacacaaaagctggatggttcaacgactacatcaacactatcttctcatcgcctccgacggtcggactgatcgtggccgtcttcctggacaacacgctggaggtgaaaaacgcggccaaggaccgggggatgccatggtgggtaccgttccggtcgttcaagggggacgccaggagcgaggagttctacagcctgcccttcaacctcaaccgcttcttccctccgtcttaa</cdnaseq>

Protein Sequence

<aaseq>TGINTLLQSLFGTRLPTVIGGSYAFVVPIMAIIQDSSLAAIPDD HERFLQTMRAIQGALIVSSSIQIILGYSQLWGIFSRFFSPLGMAPVVALLGFGLFERG FPVVGRCVEVGLPMLILFVVLSQYLKNVQIRDIPILERFSLFICIALVWAYAQILTAG GAYKHSPEVTQINCRTDRANLISSAPWIKIPFPLQWGAPTFSAGQSFGMVSAVLVSLV ESTASYKAAARLASATPPPAHILSRGIGWQGIGILLDGLFGTGTGSTVSVENVGLLGS TRIGSRRVIQISAGFMIFFSMLGKFGALFASIPFTIFAAVYCVLFGLVAAVGLSFLQF TNMNSMRNLFIVGVSIFLGLSVPEYFFRYSMAAQRGPAHTKAGWFNDYINTIFSSPPT VGLIVAVFLDNTLEVKNAAKDRGMPWWVPFRSFKGDARSEEFYSLPFNLNRFFPPS</aaseq>

Gene Sequence

<dnaseqindica>1..138#270..370#529..604#730..789#882..1066#1528..1624#1707..1793#1884..1942#2013..2104#2203..2280#2366..2526#2867..3079#accggcatcaacacgctgctgcagtcgctgttcgggacgcgcctgcccacggtgatcggcggatcctacgcgttcgtggtcccgataatggccatcatacaggactcatcgctcgccgccatacccgacgaccacgaggtaagcagagcaggcggacgctcttctttctgtccatccatccgtccaatcgcctctactgttttagattaggcgtgtctgatcacaatcatctgctgttcatctctctctctctctctctctctgagcagaggttccttcagaccatgagggcgatacagggggcactcatcgtgtcctccagcattcagatcatcctcggctacagccagctgtggggcattttctccaggtttgcccttcaactcctcctagtactacgttagaacaacacatggatggatgctgctggttacgtgcgtgtgcatgtcagattcagtttcgacagtgcctacgctcccatactgatgggtcatggtctcatgcggtgttgctgcttttgcctttcagattcttcagcccgttggggatggcgccagtggttgcattgctcgggtttggccttttcgaaagaggattccctgtggtacgagctgttcatttgacgcctcacattttcgacacgcaagcagaacatacaatgcagtatattttttttcagacaggaaagattgttcattgcattgcattgttgtttgattttactgtcaggttgggagatgcgttgaggttggacttccaatgttaattctgtttgtcgtgctttctcaggtttggcaagcaactccaatgatcgaattcttttgctagtgaccatatttgaagttgagtctaactcgtgcattgtcaattatgtttttcagtatctgaagaatgtacagataagagatattccaatactggagaggttctccctgttcatctgcatcgcgttggtttgggcctatgctcaaatcctcactgcaggtggcgcgtataagcatagccctgaggtcactcagatcaactgccgcactgaccgtgccaatctcatctcttccgcgccatggtttgtctctgcttattttcccatcgaatttgtgatatctttaatgtgccaagtaaactaaaatggttacggtgttaatgtgctttatgctatccttagtatgggactttggttgctaagctcttctttgcactacatgctctatgtcaaagtttcttagtttaaccagatttagttgattgtataggtgttcagtcacctagaagtgagacttgatcgtgactttaaagttatgatcaatagataaaaaagaaaagactaaaggcctaagctcaacctttggggcctcaacagccttgtacattttgcattggatgggtcacaggactcgcaaacagtgacaaatgggtcccacagaaaagtttagttgtcctactgaaagatagttcttcagttgatccttttggataattttattcttcagttagtgtgtgtgtgctaacaatagggacttgctccaggattaagatcccttttccactacaatggggcgcaccaactttcagtgccggtcaatcctttggtatggtatctgctgttctggtatcgctagtagaggtaatgcccctcataactcgtcttcaggagccatttctttgcgtggcagccttgaacttaactcaaagcctgtcttggacagtccacggcttcttacaaagctgcggctcggcttgcaagtgctactccacctccagcacatatcctcagtagaggcattgggtggcaggtggatatttaagtcatcctattgtttcttgttttttactcctgaatgttgttcagagctgtaattaagttgatactccataaacaacagggaattggtatccttcttgatgggctatttggaacgggtactggctccaccgtgtcagtgtgagtgaacttcagaatttttttttatcaaagagttacttccagcttgataacgttaagatcaatgcagggagaatgtcgggttgttaggatcaacgaggatcgggagccgacgagttatacagatctctgccggcttcatgatcttcttctccatgctaggtgagtaatttgttgataggacagtaatttaactgtgtgcagatcatgcccaatgttagctcagttttcctgaattctcctttttccatctggcgcaggaaaatttggagcattgtttgcttccatcccatttaccatctttgcggccgtgtactgcgtcttgtttggactagttggttggttaccctgcgccatctgatgcgagtaaatacgccactgtttttgttcttgtctcacacatttgctttgtttgactttcagcggcagtggggctctccttcttgcagtttactaacatgaactccatgcgcaacctctttatcgtcggtgtctccatctttcttggcctatctgtgcccgaatactttttccggtacagcatggccgctcagcgtggccctgcgcacacaaaagctggatgggtttgtccctctttatcaccttcctcatggctcacctatgtagcaaattgttctgcgtttctaaattcaacagtaacatgttgacaacttgatattagataaatgagatgttttacaactgtcagtaaaatatatttagatcgtttatcttttttaattcaatggggacatcaacggttaagattatttctactaaaatgttttttttcactggtagtaaaactcataaatccaacggttaagattatttctacttacaataatactagttgcagtggagattcttctgaagcgtagttaggaattacaggtactaacttttgtgtgctgtataatgcagttcaacgactacatcaacactatcttctcatcgcctccgacggtcggactgatcgtggccgtcttcctggacaacacgctggaggtgaaaaacgcggccaaggaccgggggatgccatggtgggtaccgttccggtcgttcaagggggacgccaggagcgaggagttctacagcctgcccttcaacctcaaccgcttcttccctccgtcttaaaaccagcacggggagaagtttgagggaaacggggatttcgtcgctgatgcgcgatcgaatcgtttgtgtctgtgtcagaaagaactcagaatgctgagcagaggcaatgtagatgttcttctagttggccatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0759900, RefSeq:Os01g0759900