Os01g0761300

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Revision as of 05:01, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0761300| Description = Similar to Long-chain-fatty-acid-CoA ligase-like protein| Version = NM_001050857.1 GI:115440084 GeneID:4327020| Leng...")
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Gene Name

Os01g0761300

Description

Similar to Long-chain-fatty-acid-CoA ligase-like protein

Version

NM_001050857.1 GI:115440084 GeneID:4327020

Length

3808 bp

Definition

Oryza sativa Japonica Group Os01g0761300, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:33784663..33788470

Sequence Coding Region

33784663..33784710,33784862..33784915,33785155..33785262,33785371..33785469,33786104..33786196
,33786288..33786365,33786457..33786558,33787076..33787166,33787281..33787354
,33787596..33787775,33788108..33788161,33788231..33788269

Expression

GEO Profiles:Os01g0761300

Genome Context

<gbrowseImage1> name=NC_008394:33784663..33788470 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:33784663..33788470 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>tggggatatcgaagtgaagatcaatttctgcactgtctcccactgcaccatgttcatggcctgttcaatgctctatttgcacccctctattctggatcagtggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcatatcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagttccaacaatgtacacacggctattgcaagggtatgatggtatggatcctgaacaacagtctgcatcttcctttgctgcaaagcaattgaggctaatgatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacaggtcaccgtcttttggaacgatacggcatgactgagtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggcaaaccgcttccgtgtgttgaggccaagattattatggaggatggggctgaaactacatctgaagttggcgagctttgtattagaagtccatccctttttaaggaatattggagaaaaccagaggttactgcagaatcatttattgatggtgggttcttcaagactggtgatacagtaactgtagacgatgaaggatatttcataattttagggcgcacaaatgctgacatcatgaaagttggtggttataagctgtctgcattagaaattgagtcagtgctgttacagcatgaaattgtcctggaatgtgctgttctcggcttacctgacgaagcttatggagagattatctgtgcaataattgtgcctaaggaggactcaaagaaaagagctgaactggactcgaaaccagcactgaccttggaagcactgacaagttggtcaaaagataagcttgctccatacaagattcctacgaggttgtacttatgggattcgcttcctcggaatgccatgggaaaggtcaacaagaaggagctgaagaaattattaggagcttag</cdnaseq>

Protein Sequence

<aaseq>WGYRSEDQFLHCLPLHHVHGLFNALFAPLYSGSVVEFMPKFSVR GIWQRWRESYPNNGSKNDEAITVFTGVPTMYTRLLQGYDGMDPEQQSASSFAAKQLRL MMCGSSALPSPLMKRWEEVTGHRLLERYGMTEFVMALSNPLHGARKEGTVGKPLPCVE AKIIMEDGAETTSEVGELCIRSPSLFKEYWRKPEVTAESFIDGGFFKTGDTVTVDDEG YFIILGRTNADIMKVGGYKLSALEIESVLLQHEIVLECAVLGLPDEAYGEIICAIIVP KEDSKKRAELDSKPALTLEALTSWSKDKLAPYKIPTRLYLWDSLPRNAMGKVNKKELK KLLGA</aaseq>

Gene Sequence

<dnaseqindica>1..48#200..253#493..600#709..807#1442..1534#1626..1703#1795..1896#2414..2504#2619..2692#2934..3113#3446..3499#3569..3607#tggggatatcgaagtgaagatcaatttctgcactgtctcccactgcaccatatccacaaaaagctaatgctaaatgctattttaagtacttagcacaatgttttatagtaatggattgcattagatttccctataattgtttttggaggaaccatgccttcttttgcgagatttattaaggtccttaacttcaaatttacatgttcatggcctgttcaatgctctatttgcacccctctattctggatcagtggtaattgaccttacttttactaatatctcaaatgctttattcagcatgtgcatagtgcttcacttgatcgattgatgttgtgattttgtttaaatgaaccagtcttttgtagcacttgggtttcctttctggtcgtatgatgtgttactttaagcctttaattttgttttaggagtcacatacaatgcatcttgtgtcaaaatttcttccatgctaatatatattctctgaggttgcaggttgagttcatgccgaaatttagtgtgaggggaatatggcagaggtggcgtgagtcatatcccaacaatggcagtaaaaatgatgaagcaattacagtatttactggagtacggttctatgccatatatttttggttttttagatttatgctaaactattacctgtccttaaattgctcgaggcattatggttattcgatacttttggactaccaggttccaacaatgtacacacggctattgcaagggtatgatggtatggatcctgaacaacagtctgcatcttcctttgctgcaaagcaattgaggctaatggtcagttgtatatatatcttgcaagtaattgtattgattcttggaccttggttagactaaacttcacgcgtcaggcaaaattacaactcatgtgtttcagtccgtactatgttcctgaaaagactagtagatagttactatggacaaaatctgattactatctgttgaaaatgtgcaaatatatgtatgttatatggtagtacgatagatagatcaagggtcatgaacccttcaatcctgctattcaacttgcaaagtccaactggttcattggccatgcttgctcgatcaagcactaaagtacttaattaagcacctcaggactcaatatatccgataactgtggtctcactgactttaggtttctaacaccacgataacttgaaaagcagatgaagtttcttgcatgatgcctttgtgagcttgcaatatgcatctatatttattttaggtgttttatttgattctgctgggcactgaagccaaatgactttgtttgtattcaacttttcgagctctaggtaatgatgtatagtattctttggcttgtaggctttattaagcactatcataatgtggactgatgtaattattatctaaatttttgttattaacattatatgaactggtgcagatgtgtggatcatcggcccttccttccccacttatgaaacggtgggaggaagtgacaggtcaccgtcttttggaacgatacggcatgactgaggttaaaaacacgaactcttccttttctatggacttacatttcataaatatgatatcattttttcatgttttgacagtcttattggttgtagtttgtcatggcactgtctaacccattgcatggtgcacgtaaagaaggtacagttggcaaaccgcttccgtgtgttgaggtatgctaaacgattccatggaagttaggataacatcaaactaatttattctgtattgcctcatggcacttacagaaccattctttcccaggccaagattattatggaggatggggctgaaactacatctgaagttggcgagctttgtattagaagtccatccctttttaaggaatattggagaaaaccagaggtatggttgtgttttcataaacaaaaatatgaagtctatgattgataaagtattttcctcgtcaattaaaacaatcatttgctaattctcccaacagtcaacctttatctattgtgaatgatgcacaagaaataaacttatacatttcattttgattgcgtacattatttatttgtaaataatctccatgagttgcatccttattttactaaaacccattcgttgtagattgctaattaaagggtagtgttgcttcatatttttttcacccaactctgtagcctgttctttgttaatatggactatacttgttggtatgctcttgcctgttatttgtgtcttaataagaaaccagtgtggtgcattccttttgtgggtgttgtgattgacatgacttctaagctgcaccatacaaacttagcagaatttgctaaccactaaggaaccaaatgaagggtgcatgttgagaatcaaatgtctttgtttcgttgttcagcacagttaatttgtattgcaggttactgcagaatcatttattgatggtgggttcttcaagactggtgatacagtaactgtagacgatgaaggatatttcataattttagggcgtaaggaccacttcatcgttttccactagttgtgtttttttgtttaagttgtggtgctactgtctatttgtaatcgttttgggttatctgtctcatttgtattatcctgtgtaggcacaaatgctgacatcatgaaagttggtggttataagctgtctgcattagaaattgagtcagtgctgttacaggtaaatatccccacactagacattattagcaaacgtactgccttgaaagaacttgctgatacgtagtactttccttgtggtaagaataaaggtagacaataataaaggtaaaaacttaaaatctccattttacttgaatagtttccaatagtcactttgtaaacctatctaattgaagacagcccaatggtttagttgaaggttactcatcttgtttactctggtttgatttcttgtttagcatgaaattgtcctggaatgtgctgttctcggcttacctgacgaagcttatggagagattatctgtgcaataattgtgcctaaggaggactcaaagaaaagagctgaactggactcgaaaccagcactgaccttggaagcactgacaagttggtcaaaagataagcttgctccatacaaggtttgattttctacatgttttccccctttccctagcaactttacagtatggccttatttgtgaggttgccttttttagtgttctcttttgactgttgcgtgatactccctccatccacaaaagttacacatattaccttggaagtactatgaagttctcaattcatattttgcgtgcgcaagggatggttcctgactcatgtttttctcaaccacttctggttaagtttacatatcctttgcttatattaacacgtacagcttagcttttatctgatcccgaactgaaatctttttccccgctggagttaattctttttctatgcatgatagattcctacgaggttgtacttatgggattcgcttcctcggaatgccatgggaaaggtgcgggctgaaaattttttcttctttgcagttgtgttgagtttgttacttacctattgcttttatcaggtcaacaagaaggagctgaagaaattattaggagcttagctgtggttccaggaaggcagacattgtaatggttagctaataaatatttttcgcattgataattttgctgaataaccaaaaccaaaaggaagtcacttctagcaaaacactagagatatattcatagatttggttttttattttccaaataagagattcatagatatagtgttttctaataaatggccaactgagttgccg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0761300, RefSeq:Os01g0761300