Os01g0767100

From RiceWiki
Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0767100| Description = Similar to Lysosomal Pro-X carboxypeptidase| Version = NM_001050895.1 GI:115440160 GeneID:4325498| Length = 3373 bp|...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0767100

Description

Similar to Lysosomal Pro-X carboxypeptidase

Version

NM_001050895.1 GI:115440160 GeneID:4325498

Length

3373 bp

Definition

Oryza sativa Japonica Group Os01g0767100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34090527..34093899

Sequence Coding Region

34090779..34090957,34091270..34091319,34091432..34091511,34091781..34091933,34092093..34092242
,34092465..34092588,34092674..34092786,34092875..34093008,34093154..34093340
,34093437..34093820

Expression

GEO Profiles:Os01g0767100

Genome Context

<gbrowseImage1> name=NC_008394:34090527..34093899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34090527..34093899 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcgtccgctccctctcctcctcctaatcctcgccgccgccgcgtcggccctggcgagggcgccgccccgcttcccggtgccgcacgcgcggccgcggcgtggggtggtgggggccgaggaagcggtgagagggtacgactacgagacgcgctacttccggcagcggctggaccacttcagcttcctggaggaggagggggaggagggggatgggttcttccagcagcggtacctggtcggccgcggcggcgggtgggccggcgccggcgggcccatcttcttctactgcggcaacgagggggacatcgcctggttcgccgccaactcgggcctcgtgtgggaggccgccacgcgcttcgccgctctcgtcgtcttcgccgagcatcggtactacggggagtcgatgccattcggcagcaaggataaagcttacaacaattccaagtccttggcgtatctcacagccgagcaagcgcttgctgattatgctgtactgctcactgacctcaagaagaacttgtcatcagaaggcagccctgtcgtgctcttcgggggctcatacggtggaatgctcgctgcttggatgagacttaaatacccacatattgctgttggggctctcgcgtcatcagctccaatccttcaatttgaagacgttgtcccttctaccatattctacgatctcgtgtcaaatgatttcaagagggaaagtttaagctgctttcaaacaataaaggactcttggaaagcactggatgctcaaggaaatgggcaagatggtctgctgaaactaagcaaaactttccatctatgcaagactataaaaaacactggggaactttcagattggttgagctcagcgtacagttacctggccatggtggattacccaatgccagcagattttatgatgcctttgcctggcaatccaataaaggaattgtgtacaaaaattgacaatcaacctgatggaaccagtattctggagcgcatatatgcaggagtaaatgtatactacaactacactggtactgttgactgctttgatctaaatgatgatccgcatggaatggatggatgggactggcaggcttgtaccgagatggttatgccaatgtcatacagtgaagatagtatgtttccagcagataaattcaactacacttcatatgagaaggattgcatcaacagctttggtgttgaaccaaggcctcaatggattactacagagtttggtgggcataatattagtctagttctggagagatttggtagtaatatcatattcttcaatgggcttctggatccttggagtggcggaggtgtcctgaagaatatatctgagagtgttgtggccatcatcgctccattaggagctcatcacatcgatctgcgccccgcgagcaaggacgacccggattggcttgttaggctgagagaatcagaactgggcatcatatcgggctggctctcggactactacggtgcaagaagaggggcgctcctccagcgcgccgctcccatcccatggactcttctgcaccattcgtga</cdnaseq>

Protein Sequence

<aaseq>MRPLPLLLLILAAAASALARAPPRFPVPHARPRRGVVGAEEAVR GYDYETRYFRQRLDHFSFLEEEGEEGDGFFQQRYLVGRGGGWAGAGGPIFFYCGNEGD IAWFAANSGLVWEAATRFAALVVFAEHRYYGESMPFGSKDKAYNNSKSLAYLTAEQAL ADYAVLLTDLKKNLSSEGSPVVLFGGSYGGMLAAWMRLKYPHIAVGALASSAPILQFE DVVPSTIFYDLVSNDFKRESLSCFQTIKDSWKALDAQGNGQDGLLKLSKTFHLCKTIK NTGELSDWLSSAYSYLAMVDYPMPADFMMPLPGNPIKELCTKIDNQPDGTSILERIYA GVNVYYNYTGTVDCFDLNDDPHGMDGWDWQACTEMVMPMSYSEDSMFPADKFNYTSYE KDCINSFGVEPRPQWITTEFGGHNISLVLERFGSNIIFFNGLLDPWSGGGVLKNISES VVAIIAPLGAHHIDLRPASKDDPDWLVRLRESELGIISGWLSDYYGARRGALLQRAAP IPWTLLHHS</aaseq>

Gene Sequence

<dnaseqindica>2943..3121#2581..2630#2389..2468#1967..2119#1658..1807#1312..1435#1114..1226#892..1025#560..746#80..463#acgcacgccgccacctccgacgagaacgagctcaccgctgtccactgctcctccccaccacgccggcggcaaagcggccatgcgtccgctccctctcctcctcctaatcctcgccgccgccgcgtcggccctggcgagggcgccgccccgcttcccggtgccgcacgcgcggccgcggcgtggggtggtgggggccgaggaagcggtgagagggtacgactacgagacgcgctacttccggcagcggctggaccacttcagcttcctggaggaggagggggaggagggggatgggttcttccagcagcggtacctggtcggccgcggcggcgggtgggccggcgccggcgggcccatcttcttctactgcggcaacgagggggacatcgcctggttcgccgccaactcgggcctcgtgtgggaggccgccacgcgcttcgccgctctcgtcgtcttcgccgaggcaaatttatcctctcaccttgcaccagtcagtgtgttcttccttgggtgtgcgctgatcgtgcgagatccgatcccgtttacttgttctctgcagcatcggtactacggggagtcgatgccattcggcagcaaggataaagcttacaacaattccaagtccttggcgtatctcacagccgagcaagcgcttgctgattatgctgtactgctcactgacctcaagaagaacttgtcatcagaaggcagccctgtcgtgctcttcgggggctcatacggtggaagtaaggcttctctttaactggatagccttgcctgtgcaaaatctgtattccgtagggtcttcttgaatgtggcttggtggtctgttgggctccagcttcaatctgtatttctgtactgacaccattgaatgtatgattgctgcagtgctcgctgcttggatgagacttaaatacccacatattgctgttggggctctcgcgtcatcagctccaatccttcaatttgaagacgttgtcccttctaccatattctacgatctcgtgtcaaatgatttcaaggtgtttattttgcaacatttcctgtttccttattattctcaatatacgtgagtgacatgacagatgacacttattcactgtgttttagagggaaagtttaagctgctttcaaacaataaaggactcttggaaagcactggatgctcaaggaaatgggcaagatggtctgctgaaactaagcaaaactttccatctatgcaagtgagtaatttttctattcactacatcttttttacattgagctttattaatcggtaatcatatatgtataaaaaatgttttgcaggactataaaaaacactggggaactttcagattggttgagctcagcgtacagttacctggccatggtggattacccaatgccagcagattttatgatgcctttgcctggcaatccaataaaggaagttagttcctttttgtgataaaatttaatttgctaacattcatcaaccattatttagtttgtgttctcaagacccaacaaagaagataatctagagtatcactatatcagaatgataatttagtgtgctgcaacattctgaagccttacctgcttaccatgttctattttctgcatgtcatcactactccctacttactaggttatctggtttctctttcagttgtgtacaaaaattgacaatcaacctgatggaaccagtattctggagcgcatatatgcaggagtaaatgtatactacaactacactggtactgttgactgctttgatctaaatgatgatccgcatggaatggatggatgggactggcaggtcttgcaactaaaactttatgctgtttctatccattggatatatttgatactccctctaaatgggcaaaaaaacatttatattttgggacagagggagtatatgttaaggtacttgagttatctgatatgacatatctgccattattgcttaaaacaggcttgtaccgagatggttatgccaatgtcatacagtgaagatagtatgtttccagcagataaattcaactacacttcatatgagaaggattgcatcaacagctttggtgttgaaccaaggcctcaatggattactacagagtttggtgggcatgtgagttatagtatcaaaatctcaaggttttcataaagcatatacatttgtttttaacaacttgctctgctagatgatttgtcatcgataggaaactttcttaactaagaaaaaaatgtattattattagatatgttatggaatgctcaaattctgttctactccataaactattctgcttgcaatacaactgattcttcatatttttttcagccaaaatatacatgtgagagagtttaatgacttcttgttttttttttcttgttcagaatattagtctagttctggagagatttggtagtaatatcatattcttcaatgggcttctggatccttggagtggcggagggtaaacaaacttcacttgccttttgagctttatttcctctgatgacgatctcacctacacgagccattttcgtgttatgatcttgccgttatctgaacaatgaacattacagtgtcctgaagaatatatctgagagtgttgtggccatcatcgctccattaggtatgctgttttcctacacttccattcatcaatggtggtgttaatctgtactagactcaagtgtgtgggatactgggatataatggaatcaataatatacttgagtatactactccctccgtttcacaatgtaagtcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgcgaaacggaagaagtacttgactaaatcacgttgatgtggtgcagtttgtaagcaagcacattgagtctctggtttgcatcatcttgagttattgaatcgtaaatccgctttgtgatttgcctttgcaggagctcatcacatcgatctgcgccccgcgagcaaggacgacccggattggcttgttaggctgagagaatcagaactgggcatcatatcgggctggctctcggactactacggtgcaagaagaggggcgctcctccagcgcgccgctcccatcccatggactcttctgcaccattcgtgacgatgatcggccgtgcgctgcaactcccaaccagacgctgattttcgcagctgcatttcccgtgtctaaccaataatgtacccagtgctggtgcctcgctcgctggacggctggagttctccaagctggccatgatgtcgcagtagtagtagtactagtacaccgttggtaaggtaggagcagaagctttcaccagttgttcatggactgttgctgccaacagactgggaagctaaaaaattcattagtggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0767100, RefSeq:Os01g0767100