Os01g0769000

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Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0769000| Description = Conserved hypothetical protein| Version = NM_001050904.2 GI:297597679 GeneID:4325594| Length = 6426 bp| Definition ...")
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Gene Name

Os01g0769000

Description

Conserved hypothetical protein

Version

NM_001050904.2 GI:297597679 GeneID:4325594

Length

6426 bp

Definition

Oryza sativa Japonica Group Os01g0769000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34188967..34195392

Sequence Coding Region

34189138..34189201,34189601..34189755,34191058..34191114,34191937..34192006,34192539..34194622

Expression

GEO Profiles:Os01g0769000

Genome Context

<gbrowseImage1> name=NC_008394:34188967..34195392 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34188967..34195392 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgcggggtgtcgagtcgggtggcggaggcggcggcgcgtcttcttcctcccccgccgccgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagggactcgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcgggccagaagatgggctgtaccggctctcttctgttggagaagagattgataatctgagtaacttgtcagaaattgatgatcttgcgagcacttttgcaaagttgaaccgaagcattagtggaacacggaatcctggtgttattggtgacagaagatccatctcaagaggaagttctctaactgttgattgggctgaagatgctgagtttcccaactgggtagatcaagacatattagagggtgaggaacttcaggaaagtaaaagatggtggtcacagtcacgttctctggggcagcaaggggatgccaaaccattgagccgaacatcttcatatcctcaacaaccattgcagcaccgcgcaagtgaacctatcattgcaccacaatctcctccatttacatcctttccacctccaggtgctagatcaccttatactgctcaaggccttacacgtcatgggagcattccatcagttggtgctggtctacaaatgggttctccaagcatgtcacttccaagttcttcatatcatatggctggactatctcatggactaccatatggagggagcgtgtcctttggttctccaaatcttcctggaagcaatccaatacaaaatgattggccaaaccaagccaacccgtatgctgtggatcaatttaatctacttccgaacatgttacagaaacaaatatcacttccaaatagcccaatgtcatcactgctattttctcaacagcagcagagattggcacaagttcaagtccagccatcccatcagaattacctaaatttaccacctcacctattttaccaacatcactccccagagttaacaggaaggtttgattctatcagcaatgttccttcattgagagacaagaggtcaaggtcaggaaggggaaaacacagcacacgtttttctcaaccattgactgatactggtagtcaaaatggtgatagtggtggactaaaattcaggtctaagtacatgtcatctgaagagatcgaatctatcttaagaatgcagcattcagcaagtcacagcagtgatccttatgtagttgattattaccatcaagcttgcatagcaaaaaagggtgccagttccaggcaaaaggccaattttgccccaacatcaatgaaagacttaccttccaagtccagatctagcagtgaccatcatgcatatcttcaggttgatgctctagggagggtttctttctcttccatacgtaggcctcggtctcttcttgaagttgaccttccttcatctggtgatggttctcatgatcagaagtcttctctgaggcccctggagaaagaaccaatgctggcagctagagtcactgttgaagatgccatctgcctacttcttgaggtggatgatattgaccgtctattgcagtctagccaggcacaagataacagtttccaactgaggcgaagacggcaggtcctccttgaaggtctagctacatcacttcagcttgttgaccctcttggtccgagcaaatcaagccattcatctggattggcccctaaggatgatcttgtttttcttcggattgtttctcttcctaaaggacgcaaacttttgtcacggtaccttcgacttcttacccctggaagcgagttgacccgtataatatgcatggctatttttcgacatctgaggtacttgtttgggggtttaccatcagattctagtgcagcagaaacaacagttgctcttgcaaagactgtttcatcttgtgtgctccatatggaactaggtgctcttagtgcttgccttgctgctgtcgtatgttcatctgagcagccacctctgcgtcctcttgctagctctgctggtgatggggcttctcttattattaaatcagtactggaccgagcaaccgagttgctgactgaccaccatgctgcagccagctatacagtgtcaaaccgaactctctggcaggcatcatttgatgctttctttggactcctgacaaaatactgcctcagtaagtatgaaagtattaagcagatgtttgtcatgcagtcaccatgctctgtaactggatctgaagtctcgaaagcaaccagcagggagatgccagttgagttgctacgtgcaagccttcctcatacaaacgatcagcaacgccagctgctgcttgattttgctcagcgaacaatgccagtgaccggtattaatcccactggggcaaatggtgggtacatcacctctgagtctgttcctggttga</cdnaseq>

Protein Sequence

<aaseq>MRGVESGGGGGGASSSSPAAAGNFDAGQYAFFGKEPLEGLELSC LEDGGGDGNGGGFSGPEDGLYRLSSVGEEIDNLSNLSEIDDLASTFAKLNRSISGTRN PGVIGDRRSISRGSSLTVDWAEDAEFPNWVDQDILEGEELQESKRWWSQSRSLGQQGD AKPLSRTSSYPQQPLQHRASEPIIAPQSPPFTSFPPPGARSPYTAQGLTRHGSIPSVG AGLQMGSPSMSLPSSSYHMAGLSHGLPYGGSVSFGSPNLPGSNPIQNDWPNQANPYAV DQFNLLPNMLQKQISLPNSPMSSLLFSQQQQRLAQVQVQPSHQNYLNLPPHLFYQHHS PELTGRFDSISNVPSLRDKRSRSGRGKHSTRFSQPLTDTGSQNGDSGGLKFRSKYMSS EEIESILRMQHSASHSSDPYVVDYYHQACIAKKGASSRQKANFAPTSMKDLPSKSRSS SDHHAYLQVDALGRVSFSSIRRPRSLLEVDLPSSGDGSHDQKSSLRPLEKEPMLAARV TVEDAICLLLEVDDIDRLLQSSQAQDNSFQLRRRRQVLLEGLATSLQLVDPLGPSKSS HSSGLAPKDDLVFLRIVSLPKGRKLLSRYLRLLTPGSELTRIICMAIFRHLRYLFGGL PSDSSAAETTVALAKTVSSCVLHMELGALSACLAAVVCSSEQPPLRPLASSAGDGASL IIKSVLDRATELLTDHHAAASYTVSNRTLWQASFDAFFGLLTKYCLSKYESIKQMFVM QSPCSVTGSEVSKATSREMPVELLRASLPHTNDQQRQLLLDFAQRTMPVTGINPTGAN GGYITSESVPG</aaseq>

Gene Sequence

<dnaseqindica>172..235#635..789#2092..2148#2971..3040#3573..5656#gtagtaagccgcagtgaggccgagctatccttcctctccttttcctcctcgcacacagctctctcagatccaaagccgtggagaaatcgcgcgaatccctcgcctagatgcgcgacgccgcttgctgctacagctgccgccgccgccgctgctgctagggttcttgcggagatgcggggtgtcgagtcgggtggcggaggcggcggcgcgtcttcttcctcccccgccgccgcaggtgaggcttctcgcggctgaatttggcaattcggtaacccaccttccggtgggtttcacgcgctgtttgatctggtctccgctccggcttttgccgctgagctggttgtttccagtagttgctgttgttttggtctgatttggtgcagaagtcggcgccttactgttaatctgttgcgtctctgatgcgaatctttgggagtatcgatggagaattgttcgaattcgggctctttgagttctcaactagaaaaaaaaatgatgttcttttgttggcctgattggcgtttcgtgtggttcttgccgttgttgtcggttctcgcttgtaatttggttagaagttatggtttttttacgccgattaatattaatccgtgccatctgacgcttctcgatgcaggtaattttgatgctgggcagtacgccttcttcgggaaggagccactggagggactcgagctcagttgcttggaggatggcggcggtgatggcaatggcggtggattcagcgggccagaagatgggctgtaccggctctcttctgttggagaagaggtgcggatcccggaaccttcatttgatcatgtccacagctgccatgcttcttgtgaactatcgtcctcttgatattgatttgtgttcttggttcggatgccgtccttttatctccttttccgatagcacgtttagttctaggaggaattaagaataaatccttgtgggcctatatggtcttatcagtggagttgaggttcacatcattagcgttggagggcgggaagttttatgctcaaacataggcagatcctttaccttgatgcatgttgaatggtcattgtttttatcagttgtttgatagctaaaaggttccattgcaagggtggaattccatgagacggggatagaagacgaatcttgctgctaaatgtattaagttgagaattactagaacaaatgatgttttgtttcggataaatgttcaaggtagcctttttggctgttttgtcacaaccctattattggcttgtttcagtccagtcatagttctttttggtagcctttcaggctatagctgtatagcttgtggccacggtatgattttttgatttggttagttttctggcacacttttcctagtgttacttggcccaacgctcacttgctctggagctagaagagaactatctctgcattttgagatcaatagcagaatgggacaaaaaacatataacctattttgatacagaatgctagagttcactgtttctactgttggctgtatgccatttcttgaatgttcaagttgcttttgcattctccaatcttcactgcattattgatagatcgtattgacagggcttactattgagcatgcttgaaatgttatgaggtaatttggatcttctatggatcaaatggtggtttttattatcaatatcatgtaatcctaagcttgtgctggttaacacaactagttttcagcaattgtaatgtataacaactttatacttatgctggttggatgaaacaactttaggggggttgaatttaattagttaatgtgcatttctaaatagccacttggagtttattgtgatgggcaaaaaatcgtctaatatttcattacaattggccaatattacattacaattgccatcaatatttggaactgtatcatgtggaaggtaagactctacaaggagttagggatgtctgcatgtttgaacagccttgcaccccatacatgaattttacttttgtagcgctttccctttcttcttctcatcataaattatggatttactatcgtctttagtgttgtggagttattctgattcaatttactatgttctgcagattgataatctgagtaacttgtcagaaattgatgatcttgcgagcacttttgcaaaggtttgtttcacaaactccagtgttataaattgatgtttcattatttaaaaaaaaagtgacttcgcttggatggattcactttgcagtagccgtttaagtattagatatgttaaggccctgttatgccttaccagtgttggccaagtggttactctgactcttccatacttcattcttgtattgataaataattatatttctccagaaaattgcacccccaggccacatgtcaacgatacatgcaggtgcaaatcctaaaggtgcaatctttgtggggcatataacttatacccctccccccaaaagctgaaataatctaaacattaagtgcccattttattcatttgtagttctggctatctgattatttccactacaattgggctgcctgctaccccaagcatgtactggataaatgatacatattagtggtctttaggctgaatgtagcttcttcttgcgttagcctgttttgcatctgtaagtattttgccccatctaaggcccatttgcacatagaagatctaggagtaggtaccaactaccaagtctgtaatgtctgaaattgtttcggagtgatcaactaggctgctgctctttttctaaggatacgttatatatcccatcccttagtcccaagaggattgggataatcactaatgagtaatgaggcctcaacttttatctacacctgacatattgcttgcatatggatccgtaattgcatgatattttgttttaaccttggcttctgttcttgtttcttttatgcgcttgttctgctgttgcacattgatttatttacattttttttatcatcagttgaaccgaagcattagtggaacacggaatcctggtgttattggtgacagaagatccatctcaagaggaagtaagtcagcattatgttctgatggaaaatgactaatgatgttttgtttttaaagatgttgactacaatattgacaatatgcatgtcttttgtgcatgattgttcatttttaaaatatgttgaagtcaaccattttgcatttcatttctaactcattcttggtataattttgacttgctgtacacagttgtggatttgtttatcatgtcaacagtctgttgtagaaaagaaaagaaaacattatgaattataattgttttcattaagagtgttctatagtgtagcttttgtatgcaacattgttgaaagctctatgtaatctcatttatgaaatgcttccattctgcattactacacatgttttcaaaattttaatgccgtcaatgtcggctggaagaaaggttatcttgtgtctattacacctttatttgttgaaaagcaaccatgctattgaaactctatggtgtagtcaaagtcaaatgaacactggaaggctgaacttgttactgaactatgcaaatgaccttttcaggttctctaactgttgattgggctgaagatgctgagtttcccaactgggtagatcaagacatattagagggtgaggaacttcaggaaagtaaaagatggtggtcacagtcacgttctctggggcagcaaggggatgccaaaccattgagccgaacatcttcatatcctcaacaaccattgcagcaccgcgcaagtgaacctatcattgcaccacaatctcctccatttacatcctttccacctccaggtgctagatcaccttatactgctcaaggccttacacgtcatgggagcattccatcagttggtgctggtctacaaatgggttctccaagcatgtcacttccaagttcttcatatcatatggctggactatctcatggactaccatatggagggagcgtgtcctttggttctccaaatcttcctggaagcaatccaatacaaaatgattggccaaaccaagccaacccgtatgctgtggatcaatttaatctacttccgaacatgttacagaaacaaatatcacttccaaatagcccaatgtcatcactgctattttctcaacagcagcagagattggcacaagttcaagtccagccatcccatcagaattacctaaatttaccacctcacctattttaccaacatcactccccagagttaacaggaaggtttgattctatcagcaatgttccttcattgagagacaagaggtcaaggtcaggaaggggaaaacacagcacacgtttttctcaaccattgactgatactggtagtcaaaatggtgatagtggtggactaaaattcaggtctaagtacatgtcatctgaagagatcgaatctatcttaagaatgcagcattcagcaagtcacagcagtgatccttatgtagttgattattaccatcaagcttgcatagcaaaaaagggtgccagttccaggcaaaaggccaattttgccccaacatcaatgaaagacttaccttccaagtccagatctagcagtgaccatcatgcatatcttcaggttgatgctctagggagggtttctttctcttccatacgtaggcctcggtctcttcttgaagttgaccttccttcatctggtgatggttctcatgatcagaagtcttctctgaggcccctggagaaagaaccaatgctggcagctagagtcactgttgaagatgccatctgcctacttcttgaggtggatgatattgaccgtctattgcagtctagccaggcacaagataacagtttccaactgaggcgaagacggcaggtcctccttgaaggtctagctacatcacttcagcttgttgaccctcttggtccgagcaaatcaagccattcatctggattggcccctaaggatgatcttgtttttcttcggattgtttctcttcctaaaggacgcaaacttttgtcacggtaccttcgacttcttacccctggaagcgagttgacccgtataatatgcatggctatttttcgacatctgaggtacttgtttgggggtttaccatcagattctagtgcagcagaaacaacagttgctcttgcaaagactgtttcatcttgtgtgctccatatggaactaggtgctcttagtgcttgccttgctgctgtcgtatgttcatctgagcagccacctctgcgtcctcttgctagctctgctggtgatggggcttctcttattattaaatcagtactggaccgagcaaccgagttgctgactgaccaccatgctgcagccagctatacagtgtcaaaccgaactctctggcaggcatcatttgatgctttctttggactcctgacaaaatactgcctcagtaagtatgaaagtattaagcagatgtttgtcatgcagtcaccatgctctgtaactggatctgaagtctcgaaagcaaccagcagggagatgccagttgagttgctacgtgcaagccttcctcatacaaacgatcagcaacgccagctgctgcttgattttgctcagcgaacaatgccagtgaccggtattaatcccactggggcaaatggtgggtacatcacctctgagtctgttcctggttgatatagctgaagatgccaaagggtcgatcgcaaatgcttaaaaggactcgatgcacttgtcttgcagatggcaattcatatatatctggagacatgcatgcccttcataagatgtgagcttggaagaaagttccatttgctcagggaaaaactagccttcttcagattgtgactttaggtttcagattaatctcgtagaccaacgatctcccctttctgtgggtcatttatatagcacccacctgatatgcatatgtacgtacactgttgtaacactatgctgtgatgaactagccaactcgttgggggcaaaatttagtttttaacattcatattccccagcgaagaagacgtccaagattagtgggcttagcagcagtggttgtacaggtactagggccttcctgtctgtcgttttactggtgtggaaggtgcctagcgtcaagtaaacactagtctggtcttaatctattttagtcaggaccaaagtgtgttggaataatgaagttctgtttattaggtttcttggaaggatacttaaaatgtcatggagatgcctgtatttccaggtgcctactgacactatatggtggggtactggaaactgggggtatatctcttaattgtaaatcgttacagtttgttgtcatttcatttcttcacttgttcagattggcacaagatttcggcttttagccttgtgcgaacataaatgtttggtttgttcattactctgcctacattttgtttaaagggaactccggttgcact</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0769000, RefSeq:Os01g0769000