Os01g0769700

From RiceWiki
Revision as of 05:02, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0769700| Description = Similar to Resistance protein candidate (Fragment)| Version = NM_001050907.1 GI:115440184 GeneID:4325600| Length = 3...")
(diff) ← Older revision | Latest revision (diff) | Newer revision → (diff)
Jump to: navigation, search
Gene Name

Os01g0769700

Description

Similar to Resistance protein candidate (Fragment)

Version

NM_001050907.1 GI:115440184 GeneID:4325600

Length

3153 bp

Definition

Oryza sativa Japonica Group Os01g0769700, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34217724..34220876

Sequence Coding Region

34217952..34220642

Expression

GEO Profiles:Os01g0769700

Genome Context

<gbrowseImage1> name=NC_008394:34217724..34220876 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34217724..34220876 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaagctccagattcgtgctcttgctcctcctcctcctcgccgtggcggcttgcgtcgcgcgggggcaaggcggcggaaactcgagcagcgcggcggcgccggcgccggctgcgggggcggggccgttcgtgccgcgggacgacatcctgctcgactgcggcgcgacggggaaggggaacgacacggacgggcgggtgtggagcggggacgccgggtccaagtacgcgccggcgagcctcggctcggcgtccgccgcggggcaggacccctcggtgccgcaggtgccctacctcaccgcgagggtctccgcggcgcccttcacctactccttcccgctcggcgccggccgcaagttcctcaggctccacttctacccggccaactactccagccgcgacgccgccgacgcgcgcttctccgtctccgtccccgccgccaacgtcacgctcctctccaacttcagcgcctaccagaccgccaccgccctcaacttcgcctacatcgtccgcgagttctccgtcaacgtcacgaccccgacgatggagctcaccttcacgccggagaagggccaccccaacgcctacgcgttcgtcaacggcatcgaggttgtctcctcccccgatctcttcgacatctccaccccgaatctggtcaccggggatggcaacaatcagccattcccgatcgacgctggcactgctctgcagacaatgtaccgacttaatgtcggcggccaggcgatctccccctccaaggacacgggcggttaccgttcgtgggacgatgactcgccatacgtttttggtgcggcgttcggggtgtcctacccaaaagatgacaatgtcaccattgcctaccctagcaatgtgccggagtatgtggcgccggtggatgtctatgctacggcaaggtcgatggggccggacaagaacgtgaacttggcatacaacctcacttggataatgcaggtggatgctgggttcacataccttgtgaggcttcatttctgtgagatacaatatccaatcactatgatcaatcagcgggtgttcaacatttacatcaacaaccagactgcttttcagggcgccgatgtgattgcatggactaataacaatgggatcggcagtccagtgtatcaagactttgtagtgacaacagttggttcaggggctatggatttgtgggtagctctctatccagatgtccaggctaaaccacagtactatgatgctatcctcaatggactggaggtgttcaagttgccgcttagtaatgggagccttgctgggctcaaccctgttccaactgttgagccatcgttggatggtggagcagtgaagaagtcaagtgttgggcctattgttggtggagtgattggaggtctggtggttcttgcacttggatattgctgctttatgatctgcaagcgtcggagcagagtggggaaggacacaggcatgagtgatgggcattctggatggttgccactttcactctatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttcatcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaacaacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagtgtatcgtggggagattgatggtggagtgaccaaggtggctatcaagcgtgggaatccactgtctgagcagggtgtgcatgagttccaaaccgagattgagatgctgtcgaagctccgccaccgtcatcttgtgtcactgattggttactgtgaggagaagaatgagatgatcctggtctatgactacatggctcatggaactcttcgtgagcacctgtacaagaccaagaatgcaccacttacatggaggcagcgcttggagatctgcattggtgctgcccgtgggcttcactaccttcacactggtgcgaagcacacaatcatccaccgtgatgtgaagacaacaaatatcctcctggatgagaagtgggtcgcgaaggtttcagattttggtctgtcaaagactgggccatcgatggatcacacacatgtgagcacagttgtcaagggaagttttggctaccttgaccctgaatacttccgcaggcagcagctcactgagaaatctgatgtctactcctttggtgttgtgctatttgaggtcctctgtgctcgccctgccttgaaccccactcttgctaaggaagaagttagcttggcagagtgggccctgcactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagatcgctccacagtgcttcaagaagtttgccgagactgctgagaaatgtgtttcagatgaaggcatcgatcgtccttcaatgggagatgtgctgtggaacttggaatttgcccttcaaatgcaggaaagtgcagaggatagtggaagcattggttgtgggatgtcagatgagggcactccccttgtgatgcctggaaagaaggatcccaatgatccatcgatcgagtcaagcaccactacaaccacaaccacgtccataagcatgggcgaccaaagtgttgctagcatagactccgacgggcttactcctagcgctgtcttctcacagatcatgaaccccaagggacggtga</cdnaseq>

Protein Sequence

<aaseq>MGSSRFVLLLLLLLAVAACVARGQGGGNSSSAAAPAPAAGAGPF VPRDDILLDCGATGKGNDTDGRVWSGDAGSKYAPASLGSASAAGQDPSVPQVPYLTAR VSAAPFTYSFPLGAGRKFLRLHFYPANYSSRDAADARFSVSVPAANVTLLSNFSAYQT ATALNFAYIVREFSVNVTTPTMELTFTPEKGHPNAYAFVNGIEVVSSPDLFDISTPNL VTGDGNNQPFPIDAGTALQTMYRLNVGGQAISPSKDTGGYRSWDDDSPYVFGAAFGVS YPKDDNVTIAYPSNVPEYVAPVDVYATARSMGPDKNVNLAYNLTWIMQVDAGFTYLVR LHFCEIQYPITMINQRVFNIYINNQTAFQGADVIAWTNNNGIGSPVYQDFVVTTVGSG AMDLWVALYPDVQAKPQYYDAILNGLEVFKLPLSNGSLAGLNPVPTVEPSLDGGAVKK SSVGPIVGGVIGGLVVLALGYCCFMICKRRSRVGKDTGMSDGHSGWLPLSLYGNSHSS GSAKSHTTGSYASSLPSNLCRHFSFAEIKAATNNFDESLLLGVGGFGKVYRGEIDGGV TKVAIKRGNPLSEQGVHEFQTEIEMLSKLRHRHLVSLIGYCEEKNEMILVYDYMAHGT LREHLYKTKNAPLTWRQRLEICIGAARGLHYLHTGAKHTIIHRDVKTTNILLDEKWVA KVSDFGLSKTGPSMDHTHVSTVVKGSFGYLDPEYFRRQQLTEKSDVYSFGVVLFEVLC ARPALNPTLAKEEVSLAEWALHCQKKGILDQIVDPHLKGKIAPQCFKKFAETAEKCVS DEGIDRPSMGDVLWNLEFALQMQESAEDSGSIGCGMSDEGTPLVMPGKKDPNDPSIES STTTTTTTSISMGDQSVASIDSDGLTPSAVFSQIMNPKGR</aaseq>

Gene Sequence

<dnaseqindica>229..2919#aggagctcgcttgctttgccgttgccgacgtcgcccccaatctcccgcataacgccgcggccgtagtagtcccgaaacctccctcccccacattgcttgtctcctccaccttgaacccgagtttctcacccacatccaccagatctgcgaggaggtaggaaagctcgatgcccgatctgtgaagcggaagcagttagctagttgtagttgagagcgggggtggccacaatgggaagctccagattcgtgctcttgctcctcctcctcctcgccgtggcggcttgcgtcgcgcgggggcaaggcggcggaaactcgagcagcgcggcggcgccggcgccggctgcgggggcggggccgttcgtgccgcgggacgacatcctgctcgactgcggcgcgacggggaaggggaacgacacggacgggcgggtgtggagcggggacgccgggtccaagtacgcgccggcgagcctcggctcggcgtccgccgcggggcaggacccctcggtgccgcaggtgccctacctcaccgcgagggtctccgcggcgcccttcacctactccttcccgctcggcgccggccgcaagttcctcaggctccacttctacccggccaactactccagccgcgacgccgccgacgcgcgcttctccgtctccgtccccgccgccaacgtcacgctcctctccaacttcagcgcctaccagaccgccaccgccctcaacttcgcctacatcgtccgcgagttctccgtcaacgtcacgaccccgacgatggagctcaccttcacgccggagaagggccaccccaacgcctacgcgttcgtcaacggcatcgaggttgtctcctcccccgatctcttcgacatctccaccccgaatctggtcaccggggatggcaacaatcagccattcccgatcgacgctggcactgctctgcagacaatgtaccgacttaatgtcggcggccaggcgatctccccctccaaggacacgggcggttaccgttcgtgggacgatgactcgccatacgtttttggtgcggcgttcggggtgtcctacccaaaagatgacaatgtcaccattgcctaccctagcaatgtgccggagtatgtggcgccggtggatgtctatgctacggcaaggtcgatggggccggacaagaacgtgaacttggcatacaacctcacttggataatgcaggtggatgctgggttcacataccttgtgaggcttcatttctgtgagatacaatatccaatcactatgatcaatcagcgggtgttcaacatttacatcaacaaccagactgcttttcagggcgccgatgtgattgcatggactaataacaatgggatcggcagtccagtgtatcaagactttgtagtgacaacagttggttcaggggctatggatttgtgggtagctctctatccagatgtccaggctaaaccacagtactatgatgctatcctcaatggactggaggtgttcaagttgccgcttagtaatgggagccttgctgggctcaaccctgttccaactgttgagccatcgttggatggtggagcagtgaagaagtcaagtgttgggcctattgttggtggagtgattggaggtctggtggttcttgcacttggatattgctgctttatgatctgcaagcgtcggagcagagtggggaaggacacaggcatgagtgatgggcattctggatggttgccactttcactctatggcaactcacactcatctggctcagccaaatcacatactactgggagctacgcttcatcgctgccatccaacctgtgccgccatttctcatttgcggagatcaaggctgcaacaaacaacttcgatgaatccctcctccttggtgtgggtggtttcggtaaagtgtatcgtggggagattgatggtggagtgaccaaggtggctatcaagcgtgggaatccactgtctgagcagggtgtgcatgagttccaaaccgagattgagatgctgtcgaagctccgccaccgtcatcttgtgtcactgattggttactgtgaggagaagaatgagatgatcctggtctatgactacatggctcatggaactcttcgtgagcacctgtacaagaccaagaatgcaccacttacatggaggcagcgcttggagatctgcattggtgctgcccgtgggcttcactaccttcacactggtgcgaagcacacaatcatccaccgtgatgtgaagacaacaaatatcctcctggatgagaagtgggtcgcgaaggtttcagattttggtctgtcaaagactgggccatcgatggatcacacacatgtgagcacagttgtcaagggaagttttggctaccttgaccctgaatacttccgcaggcagcagctcactgagaaatctgatgtctactcctttggtgttgtgctatttgaggtcctctgtgctcgccctgccttgaaccccactcttgctaaggaagaagttagcttggcagagtgggccctgcactgccagaagaagggtattcttgatcagattgttgatccccacctgaagggaaagatcgctccacagtgcttcaagaagtttgccgagactgctgagaaatgtgtttcagatgaaggcatcgatcgtccttcaatgggagatgtgctgtggaacttggaatttgcccttcaaatgcaggaaagtgcagaggatagtggaagcattggttgtgggatgtcagatgagggcactccccttgtgatgcctggaaagaaggatcccaatgatccatcgatcgagtcaagcaccactacaaccacaaccacgtccataagcatgggcgaccaaagtgttgctagcatagactccgacgggcttactcctagcgctgtcttctcacagatcatgaaccccaagggacggtgagctaacagtctttgcttgtcacctgcaggcattatttattctttaaacgtattctcatgagtttgtgatgttgattttctgtcaatttatggacctggaagtcagagagttgttccatattagatatttttgttttgtgctgtatattgtccatgctgtggtgacttggatacttattggctttgtattgtactctaccgctggtattaaccaccagttgatctctattactgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0769700, RefSeq:Os01g0769700