Os01g0773100

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0773100| Description = Conserved hypothetical protein| Version = NM_001050933.1 GI:115440236 GeneID:4324715| Length = 6541 bp| Definition ...")
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Gene Name

Os01g0773100

Description

Conserved hypothetical protein

Version

NM_001050933.1 GI:115440236 GeneID:4324715

Length

6541 bp

Definition

Oryza sativa Japonica Group Os01g0773100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34425388..34431928

Sequence Coding Region

34425566..34425767,34426306..34426539,34426668..34426731,34426838..34426967,34427071..34427212
,34427394..34427651,34427756..34427840,34428197..34428299,34428869..34428994
,34429064..34429177,34429357..34429475,34429581..34429668,34429742..34429834
,34429913..34430002,34430110..34430229,34430370..34430461,34430897..34430951
,34431246..34431275

Expression

GEO Profiles:Os01g0773100

Genome Context

<gbrowseImage1> name=NC_008394:34425388..34431928 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34425388..34431928 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggggcggcgccgtcgacgccgaggctgggcgcggtggcgggggccgcggcgtcgcctggggcggcggagcagatgttcgcggcgctggtcggcgggaaggcgtacccgatctcctccgagttctggaggcagctgctcgagctgcccctcacgcagcagtggccgcgggaccgcgtcctgcaggcgtgtcacgcgttcgcccagaacaactaccacacaaagcatctcgcaaagattttgatccatttggtttggtgcttgcaagagtgcatggcagagtcttctcacgcggcgtataggaaggctatcaatgctgcatatatatcatccatatttctcaaattcattattgaaaatgcaaagactgataattggcaagagctaagtcttgaaattgacaaggatgagaaggggctggaaaattttccttctgaacaaagcgtggaatattttctgatgagaggtgttctgaactacattggtagtgtagatgtaagtctggagtcatgctacctgcaccatgaacttctaaacttgatgctagtacttatgtcaactcaattgtgttctggaccatctcctgaaccaaaagatgtgcatcctttcattgatgcggctatgcttcaggacagttccatagtgtcctcggtagttcaaaagttgctgctaaattttgtaaaacgaccacggattcctttaaacagttcacaccctgctttctctgatgatggtggacctggtgttttgcagcgagttggttcagttgctgcaaactttgtactactgccatattatactttcaactaccttgtgagctcaaacgctgaaggcgcatcaagtcaattggcagacaacagtttacttgttctgcttattctgatccactaccggaagtgcattacgatgagcgaatcctttccaagcagtaatgtctacacaagcgatttaaataccaatgtcaaggatgcaccggcttttcatgataatccatattacaaggccttaagcaatgccaaagacagtcaatatgatcgtgctgatgttgaaggaaatgctcaaaatgggctagttgtcaggttgtcttttgcatcgctatttgacgctcttggcacatgcttaaaagatgagagctcggttctactgctctattctttggtccatgggaactgtgactttcaggaatatgttctggttcgaacagacctggatactttgctgatgcctatcttggaaatgctctacaatgcatcaagaaagacctccaatcagatatacatgctattgatagttcttcttatactcagtcaagattcaaccttcaatgctagtgtacacaaattggtgcttccgagcgtcccttggtaccatgagcgccttatgcatcaaacttctttgggatctttgatggttgttatactaatccgaaccatcaaatacaacctctccaaactgcgagatgtctaccttcatacaaactgccttgcaattctagcaaatatggcccctcatgtgcataggctgagtgcatatgcatctcaaaggctggttagcctctttgacatgctctctcgcaagtataccaaattagccgagttaaaaaatgacaaagctatcaaagttatatctgatcagattgaagcagacaacatctcagatgatacgtccacagaacttcacatctataccgacttcttaagaattgttctagaaatcatcaatgcaattcttacatatgcattgcctagaaatcctgaggtcgtgtatgctatcttgcatcgacaagaggtatttcagccattcaaaaaccatccccgcttcaatgaattgcttgagaatatttacacagtgttggatttcttcaatagtcgaatggacatgcagcagttagatggagaatggtctgtagataaggttcttgaggttattaacaaaaactgccgttcatggcgtggagaaggaatgaagatgtttacccagttacggtttacatatgagcaagaaagtcatcctgaggagttttttatcccatatgcatggcgcgttgtcctatcacgaggattctctttcaatcctggtgcaataaatctgttccctgtggagattcatgttgatgatgaaccatccggtgaacaaaaggtctaa</cdnaseq>

Protein Sequence

<aaseq>MGAAPSTPRLGAVAGAAASPGAAEQMFAALVGGKAYPISSEFWR QLLELPLTQQWPRDRVLQACHAFAQNNYHTKHLAKILIHLVWCLQECMAESSHAAYRK AINAAYISSIFLKFIIENAKTDNWQELSLEIDKDEKGLENFPSEQSVEYFLMRGVLNY IGSVDVSLESCYLHHELLNLMLVLMSTQLCSGPSPEPKDVHPFIDAAMLQDSSIVSSV VQKLLLNFVKRPRIPLNSSHPAFSDDGGPGVLQRVGSVAANFVLLPYYTFNYLVSSNA EGASSQLADNSLLVLLILIHYRKCITMSESFPSSNVYTSDLNTNVKDAPAFHDNPYYK ALSNAKDSQYDRADVEGNAQNGLVVRLSFASLFDALGTCLKDESSVLLLYSLVHGNCD FQEYVLVRTDLDTLLMPILEMLYNASRKTSNQIYMLLIVLLILSQDSTFNASVHKLVL PSVPWYHERLMHQTSLGSLMVVILIRTIKYNLSKLRDVYLHTNCLAILANMAPHVHRL SAYASQRLVSLFDMLSRKYTKLAELKNDKAIKVISDQIEADNISDDTSTELHIYTDFL RIVLEIINAILTYALPRNPEVVYAILHRQEVFQPFKNHPRFNELLENIYTVLDFFNSR MDMQQLDGEWSVDKVLEVINKNCRSWRGEGMKMFTQLRFTYEQESHPEEFFIPYAWRV VLSRGFSFNPGAINLFPVEIHVDDEPSGEQKV</aaseq>

Gene Sequence

<dnaseqindica>179..380#919..1152#1281..1344#1451..1580#1684..1825#2007..2264#2369..2453#2810..2912#3482..3607#3677..3790#3970..4088#4194..4281#4355..4447#4526..4615#4723..4842#4983..5074#5510..5564#5859..5888#gctcccgtgtcccatttaaaaccttcttcttcttcttcgcttccttcgtctcgactccagttggggaggcattcttttctttttctttttttttcactctcgcgtccaatccctgaatccgctggcccgcgtcgaaacctaggggcgcggtggcggtatagccgacgttcagatccaaatgggggcggcgccgtcgacgccgaggctgggcgcggtggcgggggccgcggcgtcgcctggggcggcggagcagatgttcgcggcgctggtcggcgggaaggcgtacccgatctcctccgagttctggaggcagctgctcgagctgcccctcacgcagcagtggccgcgggaccgcgtcctgcaggcgtgtcacgcgttcggtgagttgttgcccccctccgccccggctcgagatccgcgctgccctaagcggttgctctgatcgcgcgtcggtttcttcttctctttcttttttttcttttctttttttttggctcttggttagtggcggtttttttttttgccccctctctgcgggctttgatccgaggggcaatgtgaatcacgtggtttctgtgcgcgcgcgggtgtgggtttaagactttaatgcggtgcttcgaggcgatatggctagattcacatggttttcacggcatttttcctgtgttggtgtagtcgggaggatttggataattgatttatgtggattgcgagctgcatttgtggttgctcacctgtgatatatgactttgctgacatggctgtagtcaacaatatgaactgtcgtgttagtaaaattcttttttaagttcagcttactgtaatatcaagacataggtggtaaattgttacttgtagtatcatgttttgatttgtaatcgtctcgtgcttactagcctgtgctatgtgtttatgcagcccagaacaactaccacacaaagcatctcgcaaagattttgatccatttggtttggtgcttgcaagagtgcatggcagagtcttctcacgcggcgtataggaaggctatcaatgctgcatatatatcatccatatttctcaaattcattattgaaaatgcaaagactgataattggcaagagctaagtcttgaaattgacaaggatgagaaggggctggaaaattttccttctggtaattgattatctaaacgcactagttcttgcatgcctgatatattccaaaacactgtgaataccctaaatcagtttttaattactgtgatatatcgattgatttgtcatggtttcctgatctctcagaacaaagcgtggaatattttctgatgagaggtgttctgaactacattggtagtgtagatgtaaggtagatcaatcgatgacttccatatttcttttttgtgtatgtgttttgcaatgatatattaatattttgccatttgcatctcactgtttttatcctttatatgaagtctggagtcatgctacctgcaccatgaacttctaaacttgatgctagtacttatgtcaactcaattgtgttctggaccatctcctgaaccaaaagatgtgcatcctttcattgatgcggctatgcttcaggtaaaactgatagctgcttgtgcattatgtttgctggtctttttgcggaccctttttatgtctaaatttggaatgcgcatccttgccacatattcttctgcaggacagttccatagtgtcctcggtagttcaaaagttgctgctaaattttgtaaaacgaccacggattcctttaaacagttcacaccctgctttctctgatgatggtggacctggtgttttgcagcgagttggttcagttgctggtaatgtggatactctctcccatcattttccttctaacaattggtccatgcctatttttttcatacctaaccttacacaagtgtggcaaagttaggcaaatattgtatgacacatggaccatagaactagaggatgtttgaattatggaaaatctttaactttacttatttgttactgcagcaaactttgtactactgccatattatactttcaactaccttgtgagctcaaacgctgaaggcgcatcaagtcaattggcagacaacagtttacttgttctgcttattctgatccactaccggaagtgcattacgatgagcgaatcctttccaagcagtaatgtctacacaagcgatttaaataccaatgtcaaggatgcaccggcttttcatgataatccatattacaaggccttaagcaatgccaaagacagtcaatgtaagatgctcctgtcatttgcaaggaattaactgcacctgtcgtacaaagaaactgcagtactcgtatagatcactaacaaacataaatgaactatgctgcagatgatcgtgctgatgttgaaggaaatgctcaaaatgggctagttgtcaggttgtcttttgcatcgctatttgacgctcttggcacgtaagtaacacacttcatcatgctgagcggtatgatcatactgttacttgttagatgtatagaagtttgccaagtgtgattctaattaaaacaatgaaattctctctctctttctctccttgcaaacaaaaatgtactgatgatttgtgtattatgaaaagagtttaacagttctctccagatggaattatgtttgagggcttgatgtttaagaaataagaatgcacttctgttgatggaaaccaacattctgctcttaacttttcacatatttgtggggggtcattatttagaataggatatttcattattaacgaagatcaatcataatgtccatctattcgctatccatgcagatgcttaaaagatgagagctcggttctactgctctattctttggtccatgggaactgtgactttcaggaatatgttctggttcgaacagacctggatactttggtatgttagcttaataacaatatttctgaaccatatttattggagcacgagggcattcaatacatatctggacatatttgttttgggttcataaaactgctccaattttaagttctgtttctttccaatgtgatgaatagatggtattggtatttaatgtctgaaacattgcaatttggggactagattccatattgaaatacacaacagaacatgaaattgctggaaaaaataatagtcacttgggaacttccattgtgttatatagcttcgaactatgaatggcttacatttgctaaaagttattacgtatattgacttgctgaaattgctgtcttgctaaatattagaacgtttttcgctaagctgttgaaatccttatacaaccaggcagcttataattgtcttgttcaaaattccacaatttcatcatcaagctgcaactcacgaaatttgaattcatccccaaatgtactaatatgtaaaaatgttttttatggacttgagcatacccaaatccacatttaactcagcctcttactaatttattttgtaaattttgtgaacagctgatgcctatcttggaaatgctctacaatgcatcaagaaagacctccaatcagatatacatgctattgatagttcttcttatactcagtcaagattcaaccttcaatgctagtgtacacaaattggtaagcaagttgatttactatatatttatattattcaaaaagtgttaatgcttttatgtattattctaggtgcttccgagcgtcccttggtaccatgagcgccttatgcatcaaacttctttgggatctttgatggttgttatactaatccgaaccatcaaatacaacctctccaaactgcgagtacgtatcagatttttttgttgttttgtacaggaaagtcgaagcactttgtacttgatcttaccttttgtgaagttctttttttcatcttcttgctatccaatggtacagcctatacagtgtaccatgtgctaacactagacatggttcttgtttactgacaagcttatctactataggatgtctaccttcatacaaactgccttgcaattctagcaaatatggcccctcatgtgcataggctgagtgcatatgcatctcaaaggctggttagcctctttgacatgctctctcgcaagtatgctcgctcaatctttctcccagtttatttaccttgaatcttttgttacataagtgacacctaaagttaccttatcttctgcttttatgcaacattcttcaggtataccaaattagccgagttaaaaaatgacaaagctatcaaagttatatctgatcagattgaagcagacaacatctcagatgatacggtactcaacagtttgtgcacaatggcctttttttaacccctttttttcactaaacagcggtttacttttgcagtccacagaacttcacatctataccgacttcttaagaattgttctagaaatcatcaatgcaattcttacatatgcattgcctagaaatcctgaggtatgtgctgactagcaattatatttactctgtacctcatagggagaatactactgcttctaatatgtgtatcaacaggtcgtgtatgctatcttgcatcgacaagaggtatttcagccattcaaaaaccatccccgcttcaatgaattgcttgagaatatttacacagtatgtgttattgcttttcttacatgaacttgccaaagtacaaatacagaataatcaactaaggtttcctttccacaatctcaccatgttatgaatttgtctggaaggtgttggatttcttcaatagtcgaatggacatgcagcagttagatggagaatggtctgtagataaggttcttgaggttattaacaaaaactgccgttcatggcgtggagaaggaatgaaggtgatgcttataatacttagaaactgctgctttaaatggcagttctttgatgattgcacattttcttgttctttgagcacttgaaaatattctggtgtccggattgattggcttgacaatatataatgatctgttttcagatgtttacccagttacggtttacatatgagcaagaaagtcatcctgaggagttttttatcccatatgcatggcgcgttgtcctatcacgagggtaatgttttcctgttctctcttaggcttgtcatgtataaaagaaaatgagaataataaaacagtttggtcttaggtatgcagcgagcgatgactaaaaaatgcctaaactgttcttgatccaatgtcttggttttgattatggcatcttaccttgcaaggttgtcaacttgtcataagttttcacatgttctatgaaatttccttatttaggccaaaattaacccaacagtcagacagggtggttgaaatttctccagctctttatggccagctagatttgttttatctttatcacttgttttttttttctcatttctagaaatgtatgtcttagttcgtggcagggttctatgtaccatgcaatccttttattttgatgtcgtaaactccaaatccccactgatttgtcctaaccctgtcgctgcattaccagattctctttcaatcctggtgcaataaatctgttccctgtggagattcatgttgatgtaagttactctctggcctcactttttataagactctcacttgctttcctcacttccttttttttaaaaaaagaatcagatcaggttggtatgtatatgcttaaacctggaataaagcatgcacaccgtagcattgcatgagttaatagaatagatttcgcacctgaaatgatacaaatcctttggattcagtttctccttaggaattgccagtggtatcatcattttacttacattcatttattgttgcatttgtaatgacattttcttcttccaaaatgaattcccctccaggatgaaccatccggtgaacaaaaggtctaagaataatcttgaatgttgagttctgactacagcaggatgacatgttccatccaccgaggcaaatagatattgtacataggaggcatataccagacgatcgacatgtattcttattcatttgtgtatatttccgtttcctcataatgtaataccagaggtcagcgggaggagagagcggtatttaggtggcagagaactatgtagggtacaacgaacaattctttcataagttaatctttgtatttttttttcatctcttatcacctctgacgcgggaaggccactctggtgttttaacatgtctaccgtaccgtcggtcggttttcctgtgagaggcctgaaccgttctcttgaatgttgcctcagttcgaagataacctgctactccgtcggtgtttcaacaagcatgctggaagggcagaaaaaggaaagcgtgcgagaagagtttatagaccaaggaaccgacggtttcattaatcggaagctattccattttattcactttctggcttccagaaacaagtactggtaaaagaaaaaaatgtttcatgtgtctgaaaagtagtcaggtaccttcattttgatgaaatatcaaaagttgaaatgtactacggtgattggaaggcattacaactttacaagtgcactgttac</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0773100, RefSeq:Os01g0773100