Os01g0775200

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0775200| Description = Protein of unknown function DUF593 family protein| Version = NM_001050942.1 GI:115440254 GeneID:4327160| Length = 45...")
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Gene Name

Os01g0775200

Description

Protein of unknown function DUF593 family protein

Version

NM_001050942.1 GI:115440254 GeneID:4327160

Length

4590 bp

Definition

Oryza sativa Japonica Group Os01g0775200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34524464..34529053

Sequence Coding Region

34525783..34526737,34526823..34526990,34527077..34527163,34527253..34527417,34527492..34528807

Expression

GEO Profiles:Os01g0775200

Genome Context

<gbrowseImage1> name=NC_008394:34524464..34529053 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34524464..34529053 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggtacaaggatgccaaccttacggagattgtcagccacactgtcatcggtgttgctcgagtggatcttgatgctgctgctgttcatcgatgcggtttattgcttcttggtcaccagatttgcccgcctctgcagattaccggcaccgtgccctttctgctcaaggctagaccatgtcctgggtaatgagaaaccatgcttctacagggaattgatctgcaaaactcacaagtcagagatctcatctttggccttctgccgtctacatcagaaacttgcaggtgcccaaagtatgtgtgagagatgcagtgactcacttgtagaaaacaatgatgaccgcaccgatgagccaacaatggctgccactctacctgatagtaatcaaggattatattcccatgatacaagaatttgctcatgttgtgcacagcattatacacaacagagaccgacaatgttttctcgaatgatcacagaactagaacctgctgaggctgtttgctcaccaaagatttgcacagattattccatacttcatcaagtggataaatctttggataaagatatttgtcaccagagtgatcactccatccatgaacgatacagtgtgctgcagatgacatctggctccgaggatgaggctccctgtgctgatgatggcaaaatttcacaccatcataaaaccaattgtatggaggaagatttgaatgaagatgccactgccgagaaatttgctgcttcttccactgagttggtcaggccattagaaatgaatgttccgatggaaaccgatgttggtgactcatatgatatatccttgccatatgttcttgtagatgatcatcctgatagtataattggtgagggccaaatggaagcagaagatgcttcattagaaaaacagacatgccagcatgatcccctagctgtcaaagaagagtcaggtttgacagatgtcaatgtttcccaagttccagttgcatcaagtgtcgagtcacctcagaatcttgggtacaacgaggcatgtcatggagcgagtgaaagcaccattgatccatgttcatcacagtccacaacactagaacaaaacattgctgtttcagagcacaacagcacaatagatgatctggaaggtcacaggtcagaaattactgttacatcaagtagagagtttcaccagaaaagtgcattggttgatgatgatccagttaattttagagatgaccatgtttcacaagttaattctagttctgaagctgttgatgaagctgaagattatgctaaggaggctgaacagacttgtgatatggtaacacatgaagcggcactcaaagatccttccaatacaaattccaaagatcctacagcaaaaggttttgtggaagaagctcctatatcaccacaggctattagaccaaacagtgaggtatttcagggtctcaatgtcatcgaggaacatccgcaaacaagcgcgactattggtgaaaggagaccatctctaagcactcagattagcatgaatgaagcctacaagcttgccattggtgccaagagtagcttgccatcccccaccttgactgatgtgattcttggaaaggattcctcttctagtgtaaatgaagaattgaggttactgctgtcacagctctcggcttccagaggactcgaggctccatgggtcgacccaggccctagcccacgtgcgtatgggcgtggtgatgatttgatagtgcagaacatcacgaacagaatttcaattgagagaaatgcatctggtttggagtcactggagggtagcactgtaagtgagatggaaggtgaaagtgccactgaacggttgagacgacagattgatcttgaccgaaaatctatacacctcctctgcaaggaactggaagaagaaaggaacgcttcagcgattgctgcaagtcaagctttggctatgattaccagattgcaggatgacaaggctgccatgcagatggaagctttacattaccagcggatgatggaagaacaagcagagtatgatagtgatgcgcttgctaaagctaacgagctacttgctcagagggaacaacaaatagaggaattggaagctgagctcgaaaactacaggatgcagtttgcaggtggaccaacagagaaacaatccaatcaggtctcctttaatgaagaaaacattgccgaaactttgcttgatgaaactggtcttgaagctcctgcaattaccacaccaagtggtataaattcattagtgagctttgaagaggagagggcatatatagttgattgcttgacgaagctggagcagaagcttcaatcctactccaacaacagtactaacattcacttgtcaaattcagatgtcatagaggattacctttccaacaaaatgcacgttgtagatgatggctcactgcaatgccaagaaagctcaagagaggcccaggagcccgttttcttagctaaagaagctcattcttcaacagtgagtcggaagactgatcttagcacgcttcaagaagaaatctcaaacttgaacaaaagattgaagacgctagaaggagaccgcaactttattgaacatagcataaactcactcaggaatggcaaagaaggtgtgatgtttattcaggaaatcgctagcaacctaagagaactgcgagcaattgctggtagtaaataa</cdnaseq>

Protein Sequence

<aaseq>MGTRMPTLRRLSATLSSVLLEWILMLLLFIDAVYCFLVTRFARL CRLPAPCPFCSRLDHVLGNEKPCFYRELICKTHKSEISSLAFCRLHQKLAGAQSMCER CSDSLVENNDDRTDEPTMAATLPDSNQGLYSHDTRICSCCAQHYTQQRPTMFSRMITE LEPAEAVCSPKICTDYSILHQVDKSLDKDICHQSDHSIHERYSVLQMTSGSEDEAPCA DDGKISHHHKTNCMEEDLNEDATAEKFAASSTELVRPLEMNVPMETDVGDSYDISLPY VLVDDHPDSIIGEGQMEAEDASLEKQTCQHDPLAVKEESGLTDVNVSQVPVASSVESP QNLGYNEACHGASESTIDPCSSQSTTLEQNIAVSEHNSTIDDLEGHRSEITVTSSREF HQKSALVDDDPVNFRDDHVSQVNSSSEAVDEAEDYAKEAEQTCDMVTHEAALKDPSNT NSKDPTAKGFVEEAPISPQAIRPNSEVFQGLNVIEEHPQTSATIGERRPSLSTQISMN EAYKLAIGAKSSLPSPTLTDVILGKDSSSSVNEELRLLLSQLSASRGLEAPWVDPGPS PRAYGRGDDLIVQNITNRISIERNASGLESLEGSTVSEMEGESATERLRRQIDLDRKS IHLLCKELEEERNASAIAASQALAMITRLQDDKAAMQMEALHYQRMMEEQAEYDSDAL AKANELLAQREQQIEELEAELENYRMQFAGGPTEKQSNQVSFNEENIAETLLDETGLE APAITTPSGINSLVSFEEERAYIVDCLTKLEQKLQSYSNNSTNIHLSNSDVIEDYLSN KMHVVDDGSLQCQESSREAQEPVFLAKEAHSSTVSRKTDLSTLQEEISNLNKRLKTLE GDRNFIEHSINSLRNGKEGVMFIQEIASNLRELRAIAGSK</aaseq>

Gene Sequence

<dnaseqindica>1320..2274#2360..2527#2614..2700#2790..2954#3029..4344#atactacctttcggctggctgaccggggtggcgtcgctgtcccgggccggcccgcgtagccgactttcggttgagccgcccgccggccccgccccggcgaggcgtcgcacccccgccgccgccgccgcccccactccacttgcttcctctctttgtctcccttcccttcgtttttggctcgttccggcgggtgggaataatatagctcaggcgtggcgagtttggtcggcgcatgccaaccttttccgtctcctctctctctctttttgccctctgctcctgcctgcctggctgccgcgatcgcagatcgggatctcggctcagcgcgctgcggcgaccccgctgcagcttgcaggtatgtatgttcttgctggatgatcctcggaacattcttcttcttcccttgctttctttagctttcgtttctaggtttgcttctgtagttggtgagctcgggttctaggttgcttctgtagtttggagagctcgggagcacacccggtggatggtgtgattttgctgagttttctgttcttacatgggagaggctagtcaattataggggaatccgctgtgcaggctatagtagtgctaggttgcttagctttatgcttattgttctctttgtttgatcggattttgttctgttgctgggtggtttctggaagagtttagtctgttttggtgttaaaattttttcaagctttcaaagaggttcttttctttctccccttacaaaagagacagtttgagctgttctttcatcatcggagtttgtgggattcaaaagaaagctcttctgtgcagcatcactgttcttaatgcttcttgaaattgtcctgtaacaattactacttggactgatgcttccaacattctcttggtcctgggtctattgatcaccattatggctgctgctagagctggacgcttttgattttctgttttctagtggttttccaacctggtgttcggttttcctgtcttttctccagctaagctcgcctttagttcaccaaaatcaagcatatccgctacaatgacaccgccatcattactttaccgttctatcagtgctcaataatgagataaaaggccgtcctaatcccaccaaactttgatgtttacagcttttgatgagtagttgctatgttattcagaacagcatatcattactcattagtaggatcaattatacacttcactcattaagtttgtttttgattccttcagaaattctggttcaacaccagccacctttcaccaatctaaagaacttgagtacagcaattgtgaagaattgagcatactgttcaaagatgggtacaaggatgccaaccttacggagattgtcagccacactgtcatcggtgttgctcgagtggatcttgatgctgctgctgttcatcgatgcggtttattgcttcttggtcaccagatttgcccgcctctgcagattaccggcaccgtgccctttctgctcaaggctagaccatgtcctgggtaatgagaaaccatgcttctacagggaattgatctgcaaaactcacaagtcagagatctcatctttggccttctgccgtctacatcagaaacttgcaggtgcccaaagtatgtgtgagagatgcagtgactcacttgtagaaaacaatgatgaccgcaccgatgagccaacaatggctgccactctacctgatagtaatcaaggattatattcccatgatacaagaatttgctcatgttgtgcacagcattatacacaacagagaccgacaatgttttctcgaatgatcacagaactagaacctgctgaggctgtttgctcaccaaagatttgcacagattattccatacttcatcaagtggataaatctttggataaagatatttgtcaccagagtgatcactccatccatgaacgatacagtgtgctgcagatgacatctggctccgaggatgaggctccctgtgctgatgatggcaaaatttcacaccatcataaaaccaattgtatggaggaagatttgaatgaagatgccactgccgagaaatttgctgcttcttccactgagttggtcaggccattagaaatgaatgttccgatggaaaccgatgttggtgactcatatgatatatccttgccatatgttcttgtagatgatcatcctgatagtataattggtgagggccaaatggaagcagaagatgcttcattagaaaaacagacatgccagcatgatcccctagctgtcaaagaagagtcaggtttgacaggtaactgttagttccccaaactgggatgactcctactgaacttctttttcagtttgaaagattaatagcatagataatcatgcagatgtcaatgtttcccaagttccagttgcatcaagtgtcgagtcacctcagaatcttgggtacaacgaggcatgtcatggagcgagtgaaagcaccattgatccatgttcatcacagtccacaacactagaacaaaacattgctgtttcagagcacaacagcacaataggtatatcttaatcatagtttaacaataaactgaatggtattttcttcctgttcgtctaaccccccatcacaataaaaaaatgtcagatgatctggaaggtcacaggtcagaaattactgttacatcaagtagagagtttcaccagaaaagtgcattggttgatgatgatccaggtaaggctgtacctcaggactgactatttctcaagaatcaagatatatgtctgaaaggtttctttattccgacctgttttccctttcagttaattttagagatgaccatgtttcacaagttaattctagttctgaagctgttgatgaagctgaagattatgctaaggaggctgaacagacttgtgatatggtaacacatgaagcggcactcaaagatccttccaatacaaattccaaagatcctacagcaaaaggttagttgatttctaccttccctcaagcaacagtatttcaaaaactggtccttacatttaacccttttggttaggttttgtggaagaagctcctatatcaccacaggctattagaccaaacagtgaggtatttcagggtctcaatgtcatcgaggaacatccgcaaacaagcgcgactattggtgaaaggagaccatctctaagcactcagattagcatgaatgaagcctacaagcttgccattggtgccaagagtagcttgccatcccccaccttgactgatgtgattcttggaaaggattcctcttctagtgtaaatgaagaattgaggttactgctgtcacagctctcggcttccagaggactcgaggctccatgggtcgacccaggccctagcccacgtgcgtatgggcgtggtgatgatttgatagtgcagaacatcacgaacagaatttcaattgagagaaatgcatctggtttggagtcactggagggtagcactgtaagtgagatggaaggtgaaagtgccactgaacggttgagacgacagattgatcttgaccgaaaatctatacacctcctctgcaaggaactggaagaagaaaggaacgcttcagcgattgctgcaagtcaagctttggctatgattaccagattgcaggatgacaaggctgccatgcagatggaagctttacattaccagcggatgatggaagaacaagcagagtatgatagtgatgcgcttgctaaagctaacgagctacttgctcagagggaacaacaaatagaggaattggaagctgagctcgaaaactacaggatgcagtttgcaggtggaccaacagagaaacaatccaatcaggtctcctttaatgaagaaaacattgccgaaactttgcttgatgaaactggtcttgaagctcctgcaattaccacaccaagtggtataaattcattagtgagctttgaagaggagagggcatatatagttgattgcttgacgaagctggagcagaagcttcaatcctactccaacaacagtactaacattcacttgtcaaattcagatgtcatagaggattacctttccaacaaaatgcacgttgtagatgatggctcactgcaatgccaagaaagctcaagagaggcccaggagcccgttttcttagctaaagaagctcattcttcaacagtgagtcggaagactgatcttagcacgcttcaagaagaaatctcaaacttgaacaaaagattgaagacgctagaaggagaccgcaactttattgaacatagcataaactcactcaggaatggcaaagaaggtgtgatgtttattcaggaaatcgctagcaacctaagagaactgcgagcaattgctggtagtaaataacacgcacaacttctttttagttttttacacaacttatttgtatagcagatacccatccatcttgtaaattgtatacttggcaatctgttctagtttgagggaaattgcatagaaaaagcttgtattaaacacaaggcagacataattgtaagctgtgcatgtttttcatttttttgagctttgggtttgctcataatttttttaattgtattactccaagacagatttgttcatcttaatagcagc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0775200, RefSeq:Os01g0775200