Os01g0775400

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0775400| Description = Similar to Cytokinin dehydrogenase 5 precursor (EC 1.5.99.12) (Cytokinin oxidase 5) (CKO5) (AtCKX5) (AtCKX6)| Version...")
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Gene Name

Os01g0775400

Description

Similar to Cytokinin dehydrogenase 5 precursor (EC 1.5.99.12) (Cytokinin oxidase 5) (CKO5) (AtCKX5) (AtCKX6)

Version

NM_001050944.1 GI:115440258 GeneID:4327887

Length

4260 bp

Definition

Oryza sativa Japonica Group Os01g0775400, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34544334..34548593

Sequence Coding Region

34544545..34544875,34545607..34545872,34546359..34546628,34547595..34547722,34547872..34548481

Expression

GEO Profiles:Os01g0775400

Genome Context

<gbrowseImage1> name=NC_008394:34544334..34548593 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34544334..34548593 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgtggtgcttggtgttcatggtgttcttgatctactgcctcatctcgactgtcgggctgccggtggcgccggccgacgaggcggcgatgcagctgggcggcgtcggcggtgggcggctcagcgtggagccgtctgatgtgatggaggcgtcccttgactttgggcggctcaccagcgccgagccgctggccgtgttccacccgcgcggggccggcgacgtcgccgcgctggtgaaggcggcgtacgggtcggccagcggcatccgcgtctcggcgcgggggcacggccattccatcagcgggcaggcccaggcggccggcggggtggtcgtggacatgagtcacgggtggcgcgcggaggcggcggagaggacgttgccggtgtactcgccggcgctcggcgggcactacatcgacgtgtggggcggcgagctgtggatcgacgtgctcaactggacgctggcgcacggcgggctcgcgccgcgctcgtggacggactacctctacctttccgtgggcggcaccctctccaacgccggtataagtgggcaagctttccaccacgggccccagatcagcaacgtctacgagctcgacgtcgttaccgggaaaggagaggtggtgacctgctcggagtccaacaacccggacctcttcttcggcgcgctcggcgggctcggccagctcgggatcatcacgcgcgcgcgcatcgccctcgagcctgctcctcacagggttcgctggatccgggcgctctactccaacttcaccgagttcaccgcggaccaggagcggctcatctccctgcagcacggcggccggcggttcgactacgtggagggcttcgtcgtcgccgccgagggcctaatcaacaactggaggtcgtccttcttctcgccgcagaacccggtcaagctcagctcgctcaagcaccactccggggttctctactgcctggaggtcaccaagaattacgacgactccaccgccgtaaccgtcgaccaggacgtggaggcgctgctgggcgagctgaatttcatcccgggcacggtgttcacgacggacctgccgtacgtggacttcctagaccgcgtgcacaaggcggagctgaagctccgcggcaagggcatgtgggaggtcccgcacccgtggctcaacctcttcgtgccggcgtcccgcatcgccgacttcgaccgcggcgtcttccgcggcgtcctcggcagccgcaccgccggtggccccatcctcatctaccccatgaacaggcacaagtgggacccgaggagctcggtggtgacgccggaggaggacgtgttctacctggtggcgttcctgcggtcggcggtgccgggctcgaccgacccggcgcagagcctggaggcgctggagcggcagaaccgggagatcctcgagttctgcgacgaggccggcatcggggccaagcagtacctgcccaaccacaaggcgcagcgcgagtgggaggcccatttcggagcgaggtgggctcggttcgcgcggctcaaggccgagttcgacccgcgggccatgctcgccaccggccagggaatcttcgactcgccgccgctcttggcggagtcctga</cdnaseq>

Protein Sequence

<aaseq>MAWCLVFMVFLIYCLISTVGLPVAPADEAAMQLGGVGGGRLSVE PSDVMEASLDFGRLTSAEPLAVFHPRGAGDVAALVKAAYGSASGIRVSARGHGHSISG QAQAAGGVVVDMSHGWRAEAAERTLPVYSPALGGHYIDVWGGELWIDVLNWTLAHGGL APRSWTDYLYLSVGGTLSNAGISGQAFHHGPQISNVYELDVVTGKGEVVTCSESNNPD LFFGALGGLGQLGIITRARIALEPAPHRVRWIRALYSNFTEFTADQERLISLQHGGRR FDYVEGFVVAAEGLINNWRSSFFSPQNPVKLSSLKHHSGVLYCLEVTKNYDDSTAVTV DQDVEALLGELNFIPGTVFTTDLPYVDFLDRVHKAELKLRGKGMWEVPHPWLNLFVPA SRIADFDRGVFRGVLGSRTAGGPILIYPMNRHKWDPRSSVVTPEEDVFYLVAFLRSAV PGSTDPAQSLEALERQNREILEFCDEAGIGAKQYLPNHKAQREWEAHFGARWARFARL KAEFDPRAMLATGQGIFDSPPLLAES</aaseq>

Gene Sequence

<dnaseqindica>3719..4049#2722..2987#1966..2235#872..999#113..722#ctcacctcaccatcatctcttctcctcgtgctcgtcactcgcgagcaaatacatcgccatctctcctcctcctccttgtcgtcatagtgcacgcaaagaaacacggtttgcaatggcgtggtgcttggtgttcatggtgttcttgatctactgcctcatctcgactgtcgggctgccggtggcgccggccgacgaggcggcgatgcagctgggcggcgtcggcggtgggcggctcagcgtggagccgtctgatgtgatggaggcgtcccttgactttgggcggctcaccagcgccgagccgctggccgtgttccacccgcgcggggccggcgacgtcgccgcgctggtgaaggcggcgtacgggtcggccagcggcatccgcgtctcggcgcgggggcacggccattccatcagcgggcaggcccaggcggccggcggggtggtcgtggacatgagtcacgggtggcgcgcggaggcggcggagaggacgttgccggtgtactcgccggcgctcggcgggcactacatcgacgtgtggggcggcgagctgtggatcgacgtgctcaactggacgctggcgcacggcgggctcgcgccgcgctcgtggacggactacctctacctttccgtgggcggcaccctctccaacgccggtataagtgggcaagctttccaccacgggccccagatcagcaacgtctacgagctcgacgtcgttaccggtgagcaccagacaaaacctgtacagcatctcctcaaacttcttcttccccacctcctcgccccaaccaaccttccgccatgcaagcacacacgacagttatccctcgtaagtttctgacgcgtgtccgtcaccgcgattcttttacagggaaaggagaggtggtgacctgctcggagtccaacaacccggacctcttcttcggcgcgctcggcgggctcggccagctcgggatcatcacgcgcgcgcgcatcgccctcgagcctgctcctcacagggtacaccccgaaatcccacccagcccagccgtcacacccaccactggctgcgtacgtacgcacgcgcgacacagtcacacacatcatcggatcacctcactcttctcctccttccgttgagctgatcgagcgagcgatatgatggcgccgctaatctacccgttcgctccccgtgcgactttcccttttctcggcgtcatctcactctccctccagggcttggcacggagcacgacgtgacgacgaccccgttcttttgcgtcaccgccctcgctttccaactaatggcccaatagggaactgaggcatcagcgagcagccatgcaagtggcggccgggcgcgccacgccgcgcgagggaaagcgagcgattgatgcgcgctgctgggctggctgatggcctctcgggggatctttttgttaagtaccgcaatttcaccacatgtcgatcgaaaccccacaaaggggcacggggcacccaattgaaacgtgttgccaattgtggccgtcgcaaaggaaagtcaccgttgggagctgacacgtaggacaggatcgatcgaccagcgaccgagcagggggtagtgttaactttatgttgggtcgctgttgaggtctacggtctccgagaaaaagcgtctggagatgggatttttttttttgtgtgcgcgtcgggtcaggtagtggaccaggttggttgggaatttggggccgacccgatggatcgaccgaatagtttgtgctgaccaattggtggtctgcttataaatatactctatatagaagcgtttggttagctgatcgtgcgatcactcacaagattttgttgtcatatgcagctcaattagctaactaatccatgctaactaagcgtgtgtgatctaacgctgattaagctgtgtccatatgatcggtacggcccgtgggtaataataatttattaatttgtcgttctgacctgcattgccaggttcgctggatccgggcgctctactccaacttcaccgagttcaccgcggaccaggagcggctcatctccctgcagcacggcggccggcggttcgactacgtggagggcttcgtcgtcgccgccgagggcctaatcaacaactggaggtcgtccttcttctcgccgcagaacccggtcaagctcagctcgctcaagcaccactccggggttctctactgcctggaggtcaccaagaattacgacgactccaccgccgtaaccgtcgaccaggtgcgtgtccgtcgtgccggcgcgatcgcgcggccggcgccgtctttcctgattcaccaataattctctgcctccccccctgaccgcccatttgtttatgacgaaatttcttaattattcctactggagtagtttagtactctaatggcagggcacctagtcaatcattgggccatgtttttagttagttatgggcggtttagtcaagctctctagtgtaatccaagcccttgatgattgtatgattgcacccacatgctgagcacagtggatcggtggatcttgcaaacgtactagtagctgtctagatcttagtcccactgacaaaacatgcactattttatcgaccacttaattaatcaattaattacgcagtactagctattaccactagtatagtactatacgcaagtgatgaaaaagaaagacgaagtagatcattctaaactaggagtttaaataattagtttcgatttttttttccaggacgtggaggcgctgctgggcgagctgaatttcatcccgggcacggtgttcacgacggacctgccgtacgtggacttcctagaccgcgtgcacaaggcggagctgaagctccgcggcaagggcatgtgggaggtcccgcacccgtggctcaacctcttcgtgccggcgtcccgcatcgccgacttcgaccgcggcgtcttccgcggcgtcctcggcagccgcaccgccggtggccccatcctcatctaccccatgaacaggcacaagtaagcagctcgccacactcatgcccccatatactatatccagccaatctacctgtcgtaacagtaatccagtagcactcgcgcccgcagcgtcacatgaagcgcggccgtcctctcacatgcggcgcaacacgggagggcgcgggcaggtggccgatgggctgcggcgtgcgcgcccgcgcgcgcgcgagagagagcgtcccatgattggcgcgggataaacaaatatacctccagatgggcagcagattgcacaggatggatcgtgctgccgccatactttaattccgaaacgcagccgccgcatctccggtgactggaattggccgcggacataccgcgcactagggcgacagggccctattctaatcgctgcgtggtggcgccatgccaatgctaggaacagaacagaacagacggggggcgggcgcatcatcagtcaccttcaccgccttgcgccgaccggttattctaaccagggcgcgcgccgctcccgttcccaatcgcctttccacggcaccagttgttaagcttcgctagtggccagattgcacatatgtgttgtcgctttcacattagtacttaacctgaaaggacgtgtcgatcagaatcagcacagatcttgctgctaactgttgttgcttttcctactctgctccaatctttcctctctctttttttttctcggtggatttaaatactaaagagaacttgatttgcgtacgttgcaggtgggacccgaggagctcggtggtgacgccggaggaggacgtgttctacctggtggcgttcctgcggtcggcggtgccgggctcgaccgacccggcgcagagcctggaggcgctggagcggcagaaccgggagatcctcgagttctgcgacgaggccggcatcggggccaagcagtacctgcccaaccacaaggcgcagcgcgagtgggaggcccatttcggagcgaggtgggctcggttcgcgcggctcaaggccgagttcgacccgcgggccatgctcgccaccggccagggaatcttcgactcgccgccgctcttggcggagtcctgaaacgaagacgatcgacgaacaagatgatggctagctaggcgcatgtaattagtaagaatcataacaggtgattagttagtcttaatctgatgtgtagattcctcgccccataaaaaaaaatctgatgtgtagacaattctgtacagagggatgtatcagtttcatgcaaaatgtgtgcaatgtttttttgccggtaaaagtcggcgtctgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0775400, RefSeq:Os01g0775400