Os01g0778100

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0778100| Description = Protein of unknown function DUF966 family protein| Version = NM_001185659.1 GI:297720452 GeneID:9270515| Length = 23...")
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Gene Name

Os01g0778100

Description

Protein of unknown function DUF966 family protein

Version

NM_001185659.1 GI:297720452 GeneID:9270515

Length

2357 bp

Definition

Oryza sativa Japonica Group Os01g0778100, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34695983..34698339

Sequence Coding Region

34696254..34696285,34696481..34696623,34696715..34697229

Expression

GEO Profiles:Os01g0778100

Genome Context

<gbrowseImage1> name=NC_008394:34695983..34698339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34695983..34698339 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacaatttctcctggtcctacaaaaggaagtacaaggctgggtatatatggcaggacctgatgatggacgacgacctcatcacccccatctccgacaacgagtacgtgctcaagggctgcgacgtccggcgagccaccgaatcgccaaaggagaagtcgtcttctttagctgaagagccaaagaaactggacagtcaggaagtgaaggtcgcgtgcgatcagaagcaagtcgaggaggtgacgacgacgacggcgccagattccgacgagagatcgccgaagacgctgccgccggtcgacgaggactcgcccggcgagccggcgagccgtagtacggcgccgttgaagaaagacctgccacgaggccttcgcgaggagcggaagaagcagcagcgagaggtggtgaaagtggtctccaaggcggtggtggtgccggcgccggcgccggagcagaaggtgaaaggagcggcgagcggcaggatcagcagccacacgccgccggcggtgggcagcgcgcggaggatgcacctggcgcagctgctccacaacctcctgacgtgcggcgcggccgacgccgacgacaccgcgctccgccccgtcctgcggcacggcgccgacgacgacggcggcgactggcctcctacgccggtgtgccccggcatcgacggctgcggcctccggtga</cdnaseq>

Protein Sequence

<aaseq>MADNFSWSYKRKYKAGYIWQDLMMDDDLITPISDNEYVLKGCDV RRATESPKEKSSSLAEEPKKLDSQEVKVACDQKQVEEVTTTTAPDSDERSPKTLPPVD EDSPGEPASRSTAPLKKDLPRGLREERKKQQREVVKVVSKAVVVPAPAPEQKVKGAAS GRISSHTPPAVGSARRMHLAQLLHNLLTCGAADADDTALRPVLRHGADDDGGDWPPTP VCPGIDGCGLR</aaseq>

Gene Sequence

<dnaseqindica>272..303#499..641#733..1247#ggcggcggcggcggcgaggcgaggaggatcaacgtggtgtatttcttgagccgcggcggcaggacggaccacccgcacctcttccgcgtcaaccaccaccgcgccggcgtgcgcctccgcggtaagttcgtcccgtttcgccctttcgttcgatcgatctctcgcattcacgcggctcttcttcttcgtcttcttcttcttcatggtgtttatcgtgttgtcattggtttcagatgttaagaggtggctgtcggagctgcgcggccaggacatggcggacaatttctcctggtcctacaaaaggtaccgataatttcataacaggaaggcgattcatcaatcttgcccgccttatcgtcatcgtccatgatgatgatcacgcgtggttatattgttcggtgtttctttttgcgttaattcctaaatcatttttagcatgttcttgcttacccgatagatttagcaatttaggaatgtttataattgattcttgattaggaagtacaaggctgggtatatatggcaggacctgatgatggacgacgacctcatcacccccatctccgacaacgagtacgtgctcaagggctgcgacgtccggcgagccaccgaatcgccaaaggagaagtcgtcttctttaggtgcggtgatatttttttctggtcttctttttctcgttcgacgatgacgatggctcgtgattaacaaattcacaaaatttgtttgtgatagctgaagagccaaagaaactggacagtcaggaagtgaaggtcgcgtgcgatcagaagcaagtcgaggaggtgacgacgacgacggcgccagattccgacgagagatcgccgaagacgctgccgccggtcgacgaggactcgcccggcgagccggcgagccgtagtacggcgccgttgaagaaagacctgccacgaggccttcgcgaggagcggaagaagcagcagcgagaggtggtgaaagtggtctccaaggcggtggtggtgccggcgccggcgccggagcagaaggtgaaaggagcggcgagcggcaggatcagcagccacacgccgccggcggtgggcagcgcgcggaggatgcacctggcgcagctgctccacaacctcctgacgtgcggcgcggccgacgccgacgacaccgcgctccgccccgtcctgcggcacggcgccgacgacgacggcggcgactggcctcctacgccggtgtgccccggcatcgacggctgcggcctccggtgagtacggaaaccccacacaattcgatcatccgattacacagtgctcaaataggattatctggcgtgacagggtgggcaagaaggtgaaggtgcgaagaggcaggaaagacaaggcgaagccgaagcgagacggcggcgattcgcacaagccggcgagtttgccgcgttgctcgtgagtactcttgactagccagccccgtttcctctcaactgattttgctaccgcctgcacgtacgctgtccatctgtttctcgttcttgaccatttcttctgctcgtccaagaaccttgcgtggcagcttttcggttgggttgttgcagttgccacctattcaggctcgctgtgcgcaatgtgctagaccagtacggctataaacctcatgggccggcccatcaagataacaaaggctctcgttatcgagcagtctgaatagaaatttcatgggccggcccatcaagtgcagatttacgtctactttgaaaccccaaacaagctatcagcatccacacgactctgcttttttttttttctgaacaatcactttcttttccattgatcgtttataacctgtttaagaactgacttgtgaaatgttgtaacacacttctgcaggcagtgcgggaaggagttcaagccgcaggagctgcactcgcacatgcagtcgtgcagggtcttcagggagaagatgaggagcagcaccagctcccgggtcagcgtcgacaggggccggacctccgccgccgcgaggcccgaacaccggaggacgagaagcaagggcgccgccgccgccgccgccgcccccggcgacacctcggaccgaccgtccgccgtgctcctcctcagggactcatgatctgatgatcatttcgatcgaccttggagttcgtttgtgaattttgcagcacacgcttatatggcgtgcataatatttaacagcttatctaggatactgtacattgatctcctttgggtcaaaacttatagatcatgccatgatactgctcctaattgaatcctagctacgccaaatggttttttttcaggaatacgcaaaagaaaagaattgtgcacctttattatattaaaaggaataaaatttacatagacggc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0778100, RefSeq:Os01g0778100