Os01g0779300

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Revision as of 05:03, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0779300| Description = Legume lectin, beta domain containing protein| Version = NM_001050967.1 GI:115440304 GeneID:4326435| Length = 2415 b...")
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Gene Name

Os01g0779300

Description

Legume lectin, beta domain containing protein

Version

NM_001050967.1 GI:115440304 GeneID:4326435

Length

2415 bp

Definition

Oryza sativa Japonica Group Os01g0779300, complete gene.

Source

Oryza sativa Japonica Group 

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34752608..34755022

Sequence Coding Region

34752694..34754784

Expression

GEO Profiles:Os01g0779300

Genome Context

<gbrowseImage1> name=NC_008394:34752608..34755022 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34752608..34755022 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggggatctccgccgccgccgccgccgcccccttccttctcctcgtcgccctgctgctgctgctgccgtcccccgccgcggccttctccttcacctacaacttcacctcggcggacacggcgccgtcgggcatcgcgttccagggcgacgccttcttcaacaagttcatccgccttacccgcgacgagcgcatcggccccatcaccagcagcgccgggagggccttcttctcgcgccccgtcccgctctgcgaccccgtctcccgccgccgcgcctccttctccaccgccttctccttctccatcgccgcccccgacccctccgccgcctccggcgatggcctcgccttcttcctctcccccttcccctccgtcctccccaacagctccgccggcggcctcctcggcctcttcaactccttctcacgcgggggcgcagcggcggcgcacccgcgcccgctcgtcgccgtcgaattcgacacctacaagaacgagtgggaccccagcgacgaccacgtcggcgttgacctcggcgggattgtctccgccgccaccgtcgactggcccaccagcatgaaggacggccggagggcgcacgcgcgcgtcgcgtacgacggccaggccaagaacctcaccgtcgcgctctcctacggcgacgcggcggcggcggcggccctgacggaccccgtgctctggtacgccgtcgatctgatggagtacctccccgacgccgtcgccgtcggcttctccgccgccacgggcgaggccgccgagctgcaccaggtgctgtactgggagttcacctccagcatcgacaccaaggaggagacggtaatcctgtgggttgtgttggggctctgcggtttgcttctcgtgctcgtcgccgctggcgtgctctggttcgtgtcgcaatggaggaaagccggagagctcgccgatggcgacatcgacgaggagatggggtacgacgagctcgccgacgaggagttcttcgtggagagcgggccgaggcggttccggtacagcgaccttgcggcggcgaccaagaatttctccgacgagaggaagctcgggcagggcggcttcggcgccgtgtacaggggcttcttgaaggagctcggtttggcggtggcgatcaagagggtgtccaagggctcgacgcaggggcgcaaggagtacgcggcggaggtgcgcatcatcagccagctgcgccaccgccacctcgtccgcctcgtcggctggtgccacgagcaccgcggcgacttcctgctggtgtacgagctcatgcccaacggcagcgtcgaccgccacctctacggcggcggcggcggcagcaagaaggccggcggcgcggcgccgcccctctcctggccgacgcggtacaacgtcgcgctgggcctcgcgtcggcgctgctctacctccacgaggagtgcccgcagtgcgtggtgcaccgcgacatcaagccgagcaacgtcatgctcgacgccaccttcagcgccaagctcggcgacttcggcctcgccaagctcgtcgagcacggcagccagccgcacaccaccgtgctggccggcacgctgggctacctggcgccggagtgcgtcatcacgggcagggccagccgggagtcggacgtgtacagcttcggcgtcgtggcgctggagatcgcgtgcggccgccgccccgcggagctcgacgaggaggacccgagcaaggcgaggctggtgccgtgggtgtgggagctctacggcaagagagccatcctcgaagccgcggaccagaggctcaatggcaagttcgacctcgagcagatggagcggctcatggtggtaggattgtggtgcgcgcaccccgaccacgcgcaccggccgagcatcaggcaggcgctgaacgtgctcaagttcgaggcgccgctgccgtcgctgccgcccaagatgccggtgccgtcgtacttcccgccgccggacttggtcgctccggtgtccgtcgaaggcacgtcgagcaccgatggcccaggcgtcagtgagtgtggatcgtctgggtccaatgccggaggaggatcggggatcaatgataggcttctcgatccatga</cdnaseq>

Protein Sequence

<aaseq>MGISAAAAAAPFLLLVALLLLLPSPAAAFSFTYNFTSADTAPSG IAFQGDAFFNKFIRLTRDERIGPITSSAGRAFFSRPVPLCDPVSRRRASFSTAFSFSI AAPDPSAASGDGLAFFLSPFPSVLPNSSAGGLLGLFNSFSRGGAAAAHPRPLVAVEFD TYKNEWDPSDDHVGVDLGGIVSAATVDWPTSMKDGRRAHARVAYDGQAKNLTVALSYG DAAAAAALTDPVLWYAVDLMEYLPDAVAVGFSAATGEAAELHQVLYWEFTSSIDTKEE TVILWVVLGLCGLLLVLVAAGVLWFVSQWRKAGELADGDIDEEMGYDELADEEFFVES GPRRFRYSDLAAATKNFSDERKLGQGGFGAVYRGFLKELGLAVAIKRVSKGSTQGRKE YAAEVRIISQLRHRHLVRLVGWCHEHRGDFLLVYELMPNGSVDRHLYGGGGGSKKAGG AAPPLSWPTRYNVALGLASALLYLHEECPQCVVHRDIKPSNVMLDATFSAKLGDFGLA KLVEHGSQPHTTVLAGTLGYLAPECVITGRASRESDVYSFGVVALEIACGRRPAELDE EDPSKARLVPWVWELYGKRAILEAADQRLNGKFDLEQMERLMVVGLWCAHPDHAHRPS IRQALNVLKFEAPLPSLPPKMPVPSYFPPPDLVAPVSVEGTSSTDGPGVSECGSSGSN AGGGSGINDRLLDP</aaseq>

Gene Sequence

<dnaseqindica>87..2177#ggtggtcaacccaaatgtagtaagcttttgtatctcttttccaaggctcgcctggcctggggcaggagaacccgagcttctccgccatggggatctccgccgccgccgccgccgcccccttccttctcctcgtcgccctgctgctgctgctgccgtcccccgccgcggccttctccttcacctacaacttcacctcggcggacacggcgccgtcgggcatcgcgttccagggcgacgccttcttcaacaagttcatccgccttacccgcgacgagcgcatcggccccatcaccagcagcgccgggagggccttcttctcgcgccccgtcccgctctgcgaccccgtctcccgccgccgcgcctccttctccaccgccttctccttctccatcgccgcccccgacccctccgccgcctccggcgatggcctcgccttcttcctctcccccttcccctccgtcctccccaacagctccgccggcggcctcctcggcctcttcaactccttctcacgcgggggcgcagcggcggcgcacccgcgcccgctcgtcgccgtcgaattcgacacctacaagaacgagtgggaccccagcgacgaccacgtcggcgttgacctcggcgggattgtctccgccgccaccgtcgactggcccaccagcatgaaggacggccggagggcgcacgcgcgcgtcgcgtacgacggccaggccaagaacctcaccgtcgcgctctcctacggcgacgcggcggcggcggcggccctgacggaccccgtgctctggtacgccgtcgatctgatggagtacctccccgacgccgtcgccgtcggcttctccgccgccacgggcgaggccgccgagctgcaccaggtgctgtactgggagttcacctccagcatcgacaccaaggaggagacggtaatcctgtgggttgtgttggggctctgcggtttgcttctcgtgctcgtcgccgctggcgtgctctggttcgtgtcgcaatggaggaaagccggagagctcgccgatggcgacatcgacgaggagatggggtacgacgagctcgccgacgaggagttcttcgtggagagcgggccgaggcggttccggtacagcgaccttgcggcggcgaccaagaatttctccgacgagaggaagctcgggcagggcggcttcggcgccgtgtacaggggcttcttgaaggagctcggtttggcggtggcgatcaagagggtgtccaagggctcgacgcaggggcgcaaggagtacgcggcggaggtgcgcatcatcagccagctgcgccaccgccacctcgtccgcctcgtcggctggtgccacgagcaccgcggcgacttcctgctggtgtacgagctcatgcccaacggcagcgtcgaccgccacctctacggcggcggcggcggcagcaagaaggccggcggcgcggcgccgcccctctcctggccgacgcggtacaacgtcgcgctgggcctcgcgtcggcgctgctctacctccacgaggagtgcccgcagtgcgtggtgcaccgcgacatcaagccgagcaacgtcatgctcgacgccaccttcagcgccaagctcggcgacttcggcctcgccaagctcgtcgagcacggcagccagccgcacaccaccgtgctggccggcacgctgggctacctggcgccggagtgcgtcatcacgggcagggccagccgggagtcggacgtgtacagcttcggcgtcgtggcgctggagatcgcgtgcggccgccgccccgcggagctcgacgaggaggacccgagcaaggcgaggctggtgccgtgggtgtgggagctctacggcaagagagccatcctcgaagccgcggaccagaggctcaatggcaagttcgacctcgagcagatggagcggctcatggtggtaggattgtggtgcgcgcaccccgaccacgcgcaccggccgagcatcaggcaggcgctgaacgtgctcaagttcgaggcgccgctgccgtcgctgccgcccaagatgccggtgccgtcgtacttcccgccgccggacttggtcgctccggtgtccgtcgaaggcacgtcgagcaccgatggcccaggcgtcagtgagtgtggatcgtctgggtccaatgccggaggaggatcggggatcaatgataggcttctcgatccatgagcaagatttttttggggctcaattcatcaactgtagctatgccaaaaggttttctcttttttttttccctttttgtgtctgatttttcaggcttagcttcacggcatacagaagtggcagattgtatggtgtagtttttgacactttgacatgtgcatgatcaaaatgtactcccatcccacgatatagcgatgggacgtatcctaataatataaatttaaacataaatttaaacagt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0779300, RefSeq:Os01g0779300

Retrieved from "https://ngdc.cncb.ac.cn/ricewiki/index.php?title=Os01g0779300&oldid=27218"