Os01g0781000

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Gene Name

Os01g0781000

Description

Vacuolar protein sorting-associated, VPS28 family protein

Version

NM_001050976.1 GI:115440322 GeneID:4327840

Length

970 bp

Definition

Oryza sativa Japonica Group Os01g0781000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:34845056..34846025

Sequence Coding Region

34845233..34845874

Expression

GEO Profiles:Os01g0781000

Genome Context

<gbrowseImage1> name=NC_008394:34845056..34846025 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:34845056..34846025 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggaggtgaagctgtggaacgacaagcgggagcgggagctcctggagagcctcgccgacctgtacgccatcatcaaggcgacggagaagctggagcgcgcctacgtccgcgacctcgtctccgccgccgactacgaggccgagtgcctcaagctcatctcccagttcaactccctctcctcctcgctcgccggcgtcgtcaccatcccccggttcgtcgaggcctaccgcctcgactgccccgccgccctcaaccgcctcgttcagtccggcgtccccgccaccgtcgagctccgcgccgcggcgtcctcgtccgcgccggcctcctccgcggcgtccgcggccgccatcgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgccaacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccccgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaataagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatctggattcggcgtacagtgcgttcatggcatcactgcccagcaccggcctatga</cdnaseq>

Protein Sequence

<aaseq>MEVKLWNDKRERELLESLADLYAIIKATEKLERAYVRDLVSAAD YEAECLKLISQFNSLSSSLAGVVTIPRFVEAYRLDCPAALNRLVQSGVPATVELRAAA SSSAPASSAASAAAIAQCVQSFITAMDAVKLNMLANDQVRPLLHDLSTSMGKLGPVLP PDFEGKVKVSEWLAKLNKMGAGDELTEQQARQLNFDLDSAYSAFMASLPSTGL</aaseq>

Gene Sequence

<dnaseqindica>178..819#acacgaagcccctcgcaattcttcgacctcctaaactcccccatcgcgatccctctcctcctcctctttccccaatctcgcgcgacgcggcggaaccctagcccccaccgcgattcgctcgccggagagggagagggagggaagggaggctaggggaccccctcgccggcggcggagatggaggtgaagctgtggaacgacaagcgggagcgggagctcctggagagcctcgccgacctgtacgccatcatcaaggcgacggagaagctggagcgcgcctacgtccgcgacctcgtctccgccgccgactacgaggccgagtgcctcaagctcatctcccagttcaactccctctcctcctcgctcgccggcgtcgtcaccatcccccggttcgtcgaggcctaccgcctcgactgccccgccgccctcaaccgcctcgttcagtccggcgtccccgccaccgtcgagctccgcgccgcggcgtcctcgtccgcgccggcctcctccgcggcgtccgcggccgccatcgcccagtgcgtccagagctttattaccgccatggatgccgtcaagctcaacatgctcgccaacgaccaggtccgccccttgctccacgacctctcgacctccatggggaagctgggccccgtcctgccgccggacttcgaagggaaggtcaaggtgagcgagtggctcgccaagctaaataagatgggggccggggatgagctcaccgagcaacaggcaaggcagctcaacttcgatctggattcggcgtacagtgcgttcatggcatcactgcccagcaccggcctatgagcaagcctcatcctggttctgagttggtttcttctttttatttttctcatgtgtttttctatggatcaccgctgcagtgttatagccttataggtatgtgtaacttgaattgtgctatattatttgtcaataatagtgccaattttgtggt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0781000, RefSeq:Os01g0781000