Os01g0787600

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Revision as of 05:04, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0787600| Description = Similar to Salicylic acid-binding protein 2| Version = NM_001051013.1 GI:115440396 GeneID:4325859| Length = 5908 bp|...")
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Gene Name

Os01g0787600

Description

Similar to Salicylic acid-binding protein 2

Version

NM_001051013.1 GI:115440396 GeneID:4325859

Length

5908 bp

Definition

Oryza sativa Japonica Group Os01g0787600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35165501..35171408

Sequence Coding Region

35165559..35165933,35166221..35166355,35170904..35171185

Expression

GEO Profiles:Os01g0787600

Genome Context

<gbrowseImage1> name=NC_008394:35165501..35171408 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35165501..35171408 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcggacggcaaggtagcttgcaagcacctcgtcctggtccacggcgcgtgcatcggcggctggacctatttcaaggtggcgacgcggctccggtcggccgggtaccgcgtcaccgcgccggacctcggcgcgtcgggcgtcgacccgcggccgctgcgcgaggtgccgacgttccgcgactacaccgcgccgctgctgggcctcctcggctccctccctccaggggagaaggtggtcctcgtcggccacagcctcggcggcatcaacgtcgcgctggccgccgagctgttcccggacaagatcgccgccgccgtgttcctctgcgccttcatgccggaccacacgtcccggccgtcgcacgtgctcgaaaagttcatcgaggggaagtggctggactggatggacacggagtttaagccgcaggatgcagagggcaagctccccacttccatgttgttcgggccgcagatcgcccaagaaaggctgatgcagctgtgctcgccagaggacgtcactctcgcgggatctctgctgagggtgagctcgatgttcgtggaggacctgcaaaagcagcagccgttcaccgaggggcgctacggctcggtgcggaaggtgtacgtggtcgtaaaccaggacctcgccataccggaggggttccagcggtggatgatcgggaacagcccggtggatgaggtgaaggagatcgatgcggcggaccacctcgtgatgctctcgaggcccgacgagctggcgcggtgcctcgccgacatcgccgaaagctacgcttga</cdnaseq>

Protein Sequence

<aaseq>MADGKVACKHLVLVHGACIGGWTYFKVATRLRSAGYRVTAPDLG ASGVDPRPLREVPTFRDYTAPLLGLLGSLPPGEKVVLVGHSLGGINVALAAELFPDKI AAAVFLCAFMPDHTSRPSHVLEKFIEGKWLDWMDTEFKPQDAEGKLPTSMLFGPQIAQ ERLMQLCSPEDVTLAGSLLRVSSMFVEDLQKQQPFTEGRYGSVRKVYVVVNQDLAIPE GFQRWMIGNSPVDEVKEIDAADHLVMLSRPDELARCLADIAESYA</aaseq>

Gene Sequence

<dnaseqindica>59..433#721..855#5404..5685#gtcgactcgcgggaggctggactacgtaaccatacgtgatacacctcctgtaccacccatggcggacggcaaggtagcttgcaagcacctcgtcctggtccacggcgcgtgcatcggcggctggacctatttcaaggtggcgacgcggctccggtcggccgggtaccgcgtcaccgcgccggacctcggcgcgtcgggcgtcgacccgcggccgctgcgcgaggtgccgacgttccgcgactacaccgcgccgctgctgggcctcctcggctccctccctccaggggagaaggtggtcctcgtcggccacagcctcggcggcatcaacgtcgcgctggccgccgagctgttcccggacaagatcgccgccgccgtgttcctctgcgccttcatgccggaccacacgtcccggccgtcgcacgtgctcgaaaaggtgagtccattctttttttttttgcctatcaaatagctgcttaatttatttctcctgctaagatttgctgatcagccgaggggctctcgaaatgctagctcagggcttgtttggggagattcaaccagctgtagcttcttatagaattttcagttgtcagaaactccccaaataatacagctttttacctagcatttgtagatgtagaattgaccctcaaactgtgatcgatccacttctgttttgtcatgaattttactctcaagtcttgctttgctctctcaaagttcatcgaggggaagtggctggactggatggacacggagtttaagccgcaggatgcagagggcaagctccccacttccatgttgttcgggccgcagatcgcccaagaaaggctgatgcagctgtgctcgccagaggtaagtacgcgcttgttttcaccacgtctatggaggtggattttaatgcctcgagaaactttggaaatgggaaggatgaggattatttttttttgcatgtagctataaactaattataaacttatgtgaaagagtgagaaataaataaaaaaaataaaagtatttggttctcatataagagctagctattcgcatactctaagacaaatgcattaaatatactaggtgaaaccccgcgcattgttgtgaaaatttagtatgataataataaaaaaataacgtgtaagatagctagataacatcagattaagtaaattaatgtagtttatgattatttaaatttaaatagtatgtagaatggtgattcaaacataaaaagtaaggtggtatgactttatatgaaagaagaaaagtaggaaaatagtttggaccgtagattaattatctaaaggctaaaaacaattgatgtgatatgacttagttagaggaaaaaaagagaaagataatttggaccatagattaatcatttaaacactaataaagtaaagtgaggatgaactatataagtatataggatatcataaaacataataaagatatacattgaaatattatgtgaattatgttagatgataatttaacatatttgtatttgaaaagctcttaaattataaaaattataaagatatagcatgtttgcatgatgtttaaatgtgatgattgttagtagatgatgatgtggcatcttattaattagtggatgatgatgtggcatcttgttagtggatgatgatgtggcatctttgcatgttaagcttaaagagttagtggaggataactttatagtaagataggataagtgagagaaagagagaagagataaaaatataaagacaatcttatagtttatctactatactccctcttgttctaattttattgacgatttaaacataatcccacgtaccaagaaatgatttattacccatattaaatgtggcggtgtgctaattggagtaggtggtatgaacctgtcactaagcttctgtgcatgccaggttcgagagatgtagcactatggagtaataggatgcatgcatgtaggagcaagtaggtcctttatgaataggcagagactaaaatgtcaaaaagttgcatagtttggttctatcccaatacgtcaacaatatttacaactggagggaggacatattaactattatattaactataagctcatggttgtctctgctactcccattattccaaaatataagacacacctatttttcttagatgtgcatgcatatattctactgggtgcatgcattgtatttattaggatgattcaaataatgaggtgataataattgtttcttggtttttggattaagggtggttatatcttatatttttgaattacggagtataaaactttcttagagcaagtttaatagtatagccaaatgttagcttcaaattattcatagctaatctaatagtccattcatataatagttacatacaaaaatatactacaccattaatatccggtcccacctctcatacacacgcaacgtcttgagtccgtgttgcagcttgctacaaatctgtagcccgctttctcctctctcttcccttttcttctcgatatattgttatagctggcttatagcctgctattgtacttgctcttaggctgtgttcaatccagccggttcccgacccaaacagtatgcacggaaaacggaattatccattagcacgtgattaattaagtaattgctaatttttttaaaaaatggatcaatatgattattttaagcaactttcgtatagaaatttttgtaaaaaaacatcatttaacagattaaaaagcgtgcacgtgaaaaacgagaatagtaagttgggaacaagctcctaagaatatagccttagccaagaggggaccagaaagggattgatgattgtttggtggatccttgaatcaaatcagcatgtagcatgatagtatcagctagctacatgtagccctcaggccacatttttctcttagagaacgataggaacggctagtgcatatcgcttagctagtcaaaggccttgtttagttacacccaaattcccaactttccatcacatcacatcacatcagaaacttttctacacacataaactatcacctttttctccaaactatcaaatttctctcaacttcccaaattctctaccatctaaacacacccaaaatgtctacaccagcaaaatggtactcgtgccatggactgtactataaaagaaaaaattgcagagccataaaaaaacacgacaattcagattcattggtagcatgtgtactgcaagctgaaattatttttgttggcacatacctatcgtcttctttgttttttattaattgctagaaaaaataccggtgcgttgcaatgggtaaactaaaattataacaattataagatattagctgattagggtccagttttccgtgttatgagcccttgaagaaaatatattcctataaaacgaaagatagaaagaaagaaagttcattcgcgcacacagccggtgaagcgcccgcagcccaactgtgctacggcccgaggatggaagtcagaaaaacattcataatttttcagcaattttaagcaactaaaatggtactaatgctatttctgaaaatagaaaatacttaaaatatttgtggtttagggatgtgatttaaactcgatgtaaagataaaggatctaaagtaaacttattccttcctgtgcggatcgcgcgcatgcggcccatgagacgacccaacttgggatcaatctaagccgttcatttgatggacggctcggatcggttccaaatttataaaaccctaaccctaactcctcccttctccccctactacgggccaacgcgcctcccaccctccccttgtctctcctctccccaccgtgtggcgcagtggcgccgcttcctctcccccatcggcgctctccctcacctccaccggcgctccctttcctcctcgtctgggtgccgccgccgccccgctcctctcaagatccggcgggtagacggcttccggcggcgcggttgatctccggcgcagcggcggtgcggcggatccccggctcaacgacggcgcaacgacgcgtcgacggctccctagtggcagcggcggctcaggatcctcccgagctcggcacctccacaacagcgaggcggcgaggtggtggttcggcaaggagcagcggcgcctctggctcgaccttccctctcctctcctcatctttttgtgttgatattttatctcgttgatattttgtgatgattccgattgggattttgtttttgtgttggattgcgatgcgatgatttgggatttggagaagcaaagcgagggttggggggggggtgcttggctgctccccttttcttttccatctctgatccgatttttttttccatctccgatctgattttttttgcttttttgcgctgtttccaatttgggggcgacatacaaaattttttggctaaaacaccttaaatttttataatatgtaaagataaagatgtaatgtaaagaataggcttgatttactcagcctatgattctgatttttctatccgagtaaagcaatacttgatttacttggattctatataaaaaaaaggaacgacagatattacctgaagctagcaacttgcgtgtgcctcatctttatttttattttgttttcactgattggtgcggggacggagtcggataaaaaaatcgtacgtatgctataaggagacggagtcggataaaagaggagtcggccggataaataaaacgtgcactactgcgacgacgtacgaaatctacggcaaaaacatcttaaatttttataataggtaaagataaaggtaaagataaagatttgatagaccagtctattgatccatcattgtccattcactaccggactcggccaagcaccagctagtcgcttcttatcacaaacaagttttatatatcctctaggaaaaaaaagttgtatatgctcctagagtttgtgtcgaatttgtgtatgtagtcggttacagtttagaacttgaagttgtaataggtattagaattaaagtattagtcggattctatattaggatctctcgtaaatagaaggacgtacctgttgtaactgtatagcgacttagcatagggagagagagcggctgccggcggcgtccggctgtgagtcattgtaactctgatacgctggatcggggaggagcacccgtaatcagtacccagagatgtaggccacagctgaactccgttaccaaatattgtgtctcggtgtcgtcatcatgtttggatcttctatggcgtttttttccgcatttagctaccgatgtcgatttttgggactggttttataatagaaacaagcacgtgcaattatttcatttcgacttttcgagcctgcatagcgtattagcgtatactggatgacaaaactaatcaatcgttttgtccggctgcaggacgtcactctcgcgggatctctgctgagggtgagctcgatgttcgtggaggacctgcaaaagcagcagccgttcaccgaggggcgctacggctcggtgcggaaggtgtacgtggtcgtaaaccaggacctcgccataccggaggggttccagcggtggatgatcgggaacagcccggtggatgaggtgaaggagatcgatgcggcggaccacctcgtgatgctctcgaggcccgacgagctggcgcggtgcctcgccgacatcgccgaaagctacgcttgagctcgatgtcaacctgctgttaatgaagtcaatctgctgttagtgttactgccgttttagctgtcgcgttttgctgctgtagtctcttttgcgtgcctgcgctgcggtgttcgtcgcaacatactgttgggagcttggaataattcggtcttcttttcccaccaaatttgtttcgggacttctcttatattcagagaattgcaataatggtaaatggtatatt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0787600, RefSeq:Os01g0787600