Os01g0788400
| Gene Name |
Os01g0788400 |
|---|---|
| Description |
Similar to Pectinesterase (EC 3.1.1.11) (Fragment) |
| Version |
NM_001051015.1 GI:115440400 GeneID:4325861 |
| Length |
6645 bp |
| Definition |
Oryza sativa Japonica Group Os01g0788400, complete gene. |
| Source |
Oryza sativa Japonica Group ORGANISM Oryza sativa Japonica Group
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
clade; Ehrhartoideae; Oryzeae; Oryza.
|
| Chromosome | |
| Location |
Chromosome 1:35209281..35215925 |
| Sequence Coding Region |
35209338..35210283,35215070..35215764 |
| Expression | |
| Genome Context |
<gbrowseImage1> name=NC_008394:35209281..35215925 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1> |
| Gene Structure |
<gbrowseImage2> name=NC_008394:35209281..35215925 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2> |
| Coding Sequence |
<cdnaseq>atgcgtcagagagacgagcctctcctctcttctccctcgcacagaaacgcctacccatgcaaacttctatcgttcacgctgctctctttagccaccgtgctctgcctctgcgcgggcgccgccttcctcctactctccccgacggccacgaacctctgcgcgagctcccctgacccggcctcgtgccaagccatcgtcgccgacgccgtcctagcgtccccgcactcccacccgagccgcccggcgcacgtcctccgcgccatccttgccacgtctctcgatcggcatgacgcggccgcggaagcggtggcgggcatgcgccggcgcgccagcgacccgaggcaccgcgcggccctggaggactgcgtccagctgatggggctcgcgcgcgaccgtctcgccgacgcggcgggcgcgcccgacgtcgacgtcgacgtcgacgacgcgaggacgtggctcagcgccgtgctcaccgaccacgtgacgtgcctggacggcctcgacgacgggccgctgcgcgactccgtgggggcgcacctggagccgctcaagtccctcgcgagcgcgtcgctcgccgtgctcagcgccgccggccgcggcgctcgggacgtgctcgcggaggccgtggacaggttcccgtcgtggctgacggcgagagaccgcacgctcctcgacgcgggcgcgggcgccgtgcaggcggacgtggtggtggccaaagacgggagcggcaagtacacgacgataaaggaggcggtggacgcggcccccgacggcggcaagagccggtacgtgatctacgtgaagaagggggtgtacaaggagaacctcgaggtggggaagacgaagcgggtgctgatgatcgtcggcgacggcatggaccagacggtcatcaccggcagccgcaacgtggtcgacggctccacaactttcaactccgccacgctagccttgtcgggcgacgggatcatcctccaggacctcaaggtggagaacacggcgggcgccgagaagcagcaggcggtggccctccgcgtgagcgccgaccgcgccgtgatcaaccgctgccgcctggacggctaccaggacaccctgtacgcgcaccagctccgccagttctaccgcgactgcgccgtctccggcacggtggacttcgtgttcggcaacgccgcggcggtgctccagggctgcgtgctcacggcgcggcgccccgcgcaggcgcagaagaacgcggtcacggcgcagggccggaccgacccgaaccagaacaccgggacgtccatccaccggtgccgcgtcgtcccggcgcccgacctggcgcccgccgcgaagcagttcccgacgttcctgggccggccgtggaaggagtactcgcggacggtgtacatgctgtcctacctggactcgcacgtcgacccgaggggttggctcgagtggaacggcgccgacttcgcgctcaagacgctcttctacggcgagtaccagaaccagggccccggcgccagcacggccggccgcgtcaactggcccgggtaccacgtcatcacggaccagagcgtcgccatgcagttcaccgtggggcagttcatccagggcggaaactggctcaaggccaccggcgtcaactacaacgaggggctctga</cdnaseq> |
| Protein Sequence |
<aaseq>MRQRDEPLLSSPSHRNAYPCKLLSFTLLSLATVLCLCAGAAFLL LSPTATNLCASSPDPASCQAIVADAVLASPHSHPSRPAHVLRAILATSLDRHDAAAEA VAGMRRRASDPRHRAALEDCVQLMGLARDRLADAAGAPDVDVDVDDARTWLSAVLTDH VTCLDGLDDGPLRDSVGAHLEPLKSLASASLAVLSAAGRGARDVLAEAVDRFPSWLTA RDRTLLDAGAGAVQADVVVAKDGSGKYTTIKEAVDAAPDGGKSRYVIYVKKGVYKENL EVGKTKRVLMIVGDGMDQTVITGSRNVVDGSTTFNSATLALSGDGIILQDLKVENTAG AEKQQAVALRVSADRAVINRCRLDGYQDTLYAHQLRQFYRDCAVSGTVDFVFGNAAAV LQGCVLTARRPAQAQKNAVTAQGRTDPNQNTGTSIHRCRVVPAPDLAPAAKQFPTFLG RPWKEYSRTVYMLSYLDSHVDPRGWLEWNGADFALKTLFYGEYQNQGPGASTAGRVNW PGYHVITDQSVAMQFTVGQFIQGGNWLKATGVNYNEGL</aaseq> |
| Gene Sequence |
<dnaseqindica>58..1003#5790..6484#cacaggttgcagcagtagttgtaaacaggttcacttgtcgcacagggataggacaccatgcgtcagagagacgagcctctcctctcttctccctcgcacagaaacgcctacccatgcaaacttctatcgttcacgctgctctctttagccaccgtgctctgcctctgcgcgggcgccgccttcctcctactctccccgacggccacgaacctctgcgcgagctcccctgacccggcctcgtgccaagccatcgtcgccgacgccgtcctagcgtccccgcactcccacccgagccgcccggcgcacgtcctccgcgccatccttgccacgtctctcgatcggcatgacgcggccgcggaagcggtggcgggcatgcgccggcgcgccagcgacccgaggcaccgcgcggccctggaggactgcgtccagctgatggggctcgcgcgcgaccgtctcgccgacgcggcgggcgcgcccgacgtcgacgtcgacgtcgacgacgcgaggacgtggctcagcgccgtgctcaccgaccacgtgacgtgcctggacggcctcgacgacgggccgctgcgcgactccgtgggggcgcacctggagccgctcaagtccctcgcgagcgcgtcgctcgccgtgctcagcgccgccggccgcggcgctcgggacgtgctcgcggaggccgtggacaggttcccgtcgtggctgacggcgagagaccgcacgctcctcgacgcgggcgcgggcgccgtgcaggcggacgtggtggtggccaaagacgggagcggcaagtacacgacgataaaggaggcggtggacgcggcccccgacggcggcaagagccggtacgtgatctacgtgaagaagggggtgtacaaggagaacctcgaggtggggaagacgaagcgggtgctgatgatcgtcggcgacggcatggaccagacggtcatcaccggcagccgcaacgtggtcgacggctccacaactttcaactccgccacgctaggtgatgctctcgatcgccgtctgcgtctttgtctctctctactttctgaaattcgcactcattccatctacgacactacgactatttcgcaaaccgcatctttactttgcataatacaaccttttcaaaagggaaatcacaacatgataattcctgaacgttggcgcgcatgaatattcttttctcttcttcaaactaaaccatgggtattctttcagattgccttcttcgtaacgtcctactgacatgcatggatagctacgcatttcttgcttgatatacactagtcatctaaacttagcttggtaatcggtataccagtctacacagtactgtgtacgaggcacagtactgtagtgcactgatatactccataatataagccccgctaagctcacgtacgtaggattgggtcagtaaacagttagtgtcaacttcgaaataaccggaaaagaatcaacaagtggatctcataatctaattcgttgactaatatagtataagcagatagaaaaatgattaccagtggttgttggtgacatggtgcgcatgtgcagatcgatgtgccattggctagaatacacacaggtggaaacatagagtagttatccccaaaagcaaagcacttaaaatcttcggcaatggttgtttggcttaaatggtggtagcatcacatcacacagtggacgtacttaattttgcacatgtccgtgctacgtgctccatgccatgctccactgctacataaatacaccgcacttacacatccacaaatacctgctctatttttttaggctgtgtgtttagttcagcgcaaagtttggattttagttgaaattagagatgatgtgactgaaaagttgtgtatgtataacaggttgatatgatggaaaaggactgaagtttggatccaaactttagatctaaacacagccttatttaacaaacacatgctctgttgttggactatagatacattcctagcctcattgaaaacgcacctacgtatacttaacatttaggagtatcgggatttgagttttttttatactccctctgggttgataatacttgtcgttttggataagggcacggtctccaaaaaacaactttaactattattttctattataatatgtataaaagtgttaacaaatatatgattttattaaagtactttttaagactaatctatatatatgtagtcaccatatttaaaagacaaatattttaaaaatgattcataatcaaagactctaaagtttgacctcacccttgcctaaaacgacaagtattatcagcccggagggagtatcatggtttactcgtagtaattattttctgatttttttagtaattttagatcttaggcatcgtaatttgaatcctttagagggtgggcatcataatttaaatttcttagattatatacttttctaatttattattaattattttcaaaccttctagatggtggtttcacccacatttcaatttttttttaaatcatcggaggggagagtcgtgttcccacctgatttttccatggcaaagagagtttccccacgtttcagcttttaatgcgtggattttagggaccgatcactttgatgaaaaaaaaacataccaaattatggcaatgccaaaattttggcatagttgtcaaaattttggtgacatgacaaaattttggcagaatttcttatatagttaccaaaatttgacagcaaactaatgtatctaattttttttttgacaactttattaaaacttggtaaagttaaaaatggtatctaagtaaaaaaaagcccttaattcagtaaccatagcagcaggacagaaagctgtcaaggcatccattggtacataattttcttgcaacacagttactaggagtacataacagtgctgaaactgcaccacaggcgataaagcaatgacattcttcggtatcgccttcactcgtcctaattgtttttttttttcgaacgaaacgattttcatatattatatactaaaaatccattaaacttcctacaaacgctctcaaaccgccacgtagcactcctacaaacgctccaagatcgtcacgtggcactttaataaatcatagaaaatctaagaaaaaataaagcatctagccattaattttcatttaatttggtgggaccattatttttaactattagatctatcgtcaaaattatcaatcaaatttatatctcgaaagatctacatcgttccatatctgtacgtgagttgtacatatgtatcctcaaacccacacccgaccaaaaaaaattgtacgtacttctctttccttttttttatttctcactttgttgaaaaaccaatttaataatcagcacatcttaactataatttgttcaaataaaaaatatatctcatggaaacatccaggaaaaatataaataaattaaagttatagatatatcacataacaacatgtataattatattagatttttattttcaaaaataaaacaacttcgactgtgagtagcattttcaaaatttactcaatacctactataaaaatattcatatgacaaaatgacattactaaatttatcttgaatattttcatgtatcatgttttcttcttcatatattgctagaaaattaacgacgaagtatattcttttgataccgtgtcgatgtcctttatctcctacctaggccttcaatcgatctggctgagtttatcaaggcacacaaaatgatacatgtcatcaaaaaaggattaattaagtattaaatattacaaacttaaaaatgggtttatttgatttcctaaaatatttttgtatagaaagtatttacaaaacacgcattgtttagttcgggaaacttttgtagtttgggaacatgctcgtcataaataataaagtagccaatcagataagcactttaaaagtcaaccttacttacttaaacacttaatatgtagtatataatataatttatcaataggaatagccaaatatatatcaatcgtatgtttccactaatcccatgtatataagttctatatagaaattactatccaccaatcgccaagtcataatagttatgaggcatacatgcattatgcaactaataattagttgatatccaataagcatgtacatatgttatcaagtaccaaagataaaggaagtactaagtggtaaccatcaataaatgatatgtaagtagagatacaccaagccaccacgaaaaatagttgactacaagtagaatatgactattattaatagtgttcctacacacctgcatatacttctaattaagatgccacaagacactctaataaaatagagaaaatgtaagaaaattataagaaaaagaaaaaatcatttagccattgatttacacttagaccagtggattcattattgtcaaccattagaatatatctatcaagtaatccctcgctactaaataccggctaatccctccctaagtagttttctctttctttctttgcagctctaaggtttttctcaaattatgtatatatgtagtgaccacttctggtggggttgccgaaaaagccacgccaccacattgctgcttcacaccatcccaccaaatctcttcaaagtatttattttactaatggtataaaagggtattgtgagcactcatataaatgcaggcacatacaacttataaatacaattacacacctaccttataaaaggagaaaagtacattcgtacaggggaaactactattcgctagaaaaaacatatatacttacgataaaaaatatcacatggaaccacattatatcccttttaattataacattctcacctaaatagtgttgataattagcacaaataattttgacaatatagattattctattgtttgttacccatgaatatgcatcggtgaatcggatgtataatgaaagaaaaaaacaaacacatattaactcatatatatatatatatatatatatatatatatatatatatatatatatatttgcgaagaaggatgatatgcgagttcacatataactaggatataaatatttgtttctttactattacaatctattttcttacaaacaataaataaatttcccgcgcatctgcgcgggttttctttctagctgaataaagaagggataaactgtatgagtaaggggccttaggccctagctaactatactgtaagccaatctccgagtctttttttcttccaccaggacccaagttttagcctcctactcgatttttgccatcaaactggccgactcatcctaattgtagcagtatgtactgtgtagaacagtagaagtgtagaagaaccatcgcttggaggcacattctctgaatcaaaggttgacatatagctaaccaaaagcacttattgcaaactgggaatactttaattagcaggcggcacacaagggcgatggaataccgcggcgagtgcaaaaccggagcctgaaacagcccagcttctcgcacaaaccaattaacgacgaacacggcttgacgaacagtattaaaatgccctgtttccaatccactagccctgcccaagggtcaaagtagacggcccaaaacgtacgacacgccgccacgagaccacgatggcacacttgagttaacaacatgcccaatagcttgtacatgaacaatttgcgtggattttcctgtcttgcattgatgcattgactgactgcaagcagtcatgactaagtttgaccttggatatatgcgtaacatatgcgtgcgtgcagccttgtcgggcgacgggatcatcctccaggacctcaaggtggagaacacggcgggcgccgagaagcagcaggcggtggccctccgcgtgagcgccgaccgcgccgtgatcaaccgctgccgcctggacggctaccaggacaccctgtacgcgcaccagctccgccagttctaccgcgactgcgccgtctccggcacggtggacttcgtgttcggcaacgccgcggcggtgctccagggctgcgtgctcacggcgcggcgccccgcgcaggcgcagaagaacgcggtcacggcgcagggccggaccgacccgaaccagaacaccgggacgtccatccaccggtgccgcgtcgtcccggcgcccgacctggcgcccgccgcgaagcagttcccgacgttcctgggccggccgtggaaggagtactcgcggacggtgtacatgctgtcctacctggactcgcacgtcgacccgaggggttggctcgagtggaacggcgccgacttcgcgctcaagacgctcttctacggcgagtaccagaaccagggccccggcgccagcacggccggccgcgtcaactggcccgggtaccacgtcatcacggaccagagcgtcgccatgcagttcaccgtggggcagttcatccagggcggaaactggctcaaggccaccggcgtcaactacaacgaggggctctgattagaagggtagagattattgatctgccatcttgtacgagttgccatgttcgcatgcaccctgttggttccaatacggagtactaatcatcgtcatcatcaggaaataaaagcaataaagcatgctaatggcgcagatcagatcaatctgatcggaggtgc</dnaseqindica> |
| External Link(s) |
