Os01g0793500

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0793500| Description = Conserved hypothetical protein| Version = NM_001051033.1 GI:115440436 GeneID:4324130| Length = 4909 bp| Definition ...")
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Gene Name

Os01g0793500

Description

Conserved hypothetical protein

Version

NM_001051033.1 GI:115440436 GeneID:4324130

Length

4909 bp

Definition

Oryza sativa Japonica Group Os01g0793500, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35365270..35370178

Sequence Coding Region

35365519..35365734,35365989..35366189,35367193..35367285,35367525..35367770,35368595..35368960
,35369047..35369187,35369758..35370114

Expression

GEO Profiles:Os01g0793500

Genome Context

<gbrowseImage1> name=NC_008394:35365270..35370178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35365270..35370178 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggaggagcctacaacctcaagctcctcgccgccctctccgcgctcgtcctcctcctcgccgcctcgcgccccttcctcccggggctcctggaggcggccctccgcgcccccgtcctcccgcgcgacctcctccctctcctgccctggccggtggcccagccgctgctccgccgcctcgcgctgcgcggcgccgccgacctcctcccgtccttcgtcggcgtcgcgcgggagccaggtgatggcggcgcccgcgccgccgagtggaagggcgcctgcttctacgataaccgggcgtggatggagttccacaacgggactgatgggggccttggaggtggtacgctccatctcgagacaaacaaagctcatagctggacttgcatagacctttatgtgtttgcaacaccatatcgtgttacatgggattactactttgtaggtcgtgagcatacccttgatttcaaagaatgggaaagcgaggctgaatatgaatatgtaaaacgcaaaggagtatccatattcctgatgccatctggaacaattggaacacttagagcactttgggatgttttccccctgtttacaaatactcaatggggtgagaattcaaatcttgcatttctaaagaagcatatgggtgcaaccttcgaggaacgtccgaaaccttgggtgtcagaattaaatgttgacgatatccactctggagattttttggttttatcaaaaattcgtgggcgctggggtggttttgaaaccctagagaagtgggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagctttgggttggggaatctggtcatgagaatgaacagggagaagatattattgctatcttgccatgggaagaatggtgggactttgaagtaaaaaaggatgattccaatcctcagattgcattactacctttgcatccagatttgcgtgcaaaatttaatgagacagcagcttgggaatatgcaaaaagcatggatggaaaaccttatgggtaccacaatatgatttttagttggattgataccataagcgacaactatccaccgccattagatgctcatgtggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatgtggaaagaagcccttaacaaacggcttggaactaagggtcttgatctacctgaaatcatagtggaatcagagaagcgtgggatgacatttgacaaattgctaacagttcctgagcaagataagtgggtctatactgatggccagtctgcttcttgtgtggcttacgtccttatgatgtacaaggaggctggactctttgacccaattgccagctctatagaagttactgaattcaccataaaagatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtggtgcaacaaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaatggagttgcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgtccttctctgcctccgaattataacagaccgcgaaattgctga</cdnaseq>

Protein Sequence

<aaseq>MGGAYNLKLLAALSALVLLLAASRPFLPGLLEAALRAPVLPRDL LPLLPWPVAQPLLRRLALRGAADLLPSFVGVAREPGDGGARAAEWKGACFYDNRAWME FHNGTDGGLGGGTLHLETNKAHSWTCIDLYVFATPYRVTWDYYFVGREHTLDFKEWES EAEYEYVKRKGVSIFLMPSGTIGTLRALWDVFPLFTNTQWGENSNLAFLKKHMGATFE ERPKPWVSELNVDDIHSGDFLVLSKIRGRWGGFETLEKWVTGAYAGHTAVCLRDSEGK LWVGESGHENEQGEDIIAILPWEEWWDFEVKKDDSNPQIALLPLHPDLRAKFNETAAW EYAKSMDGKPYGYHNMIFSWIDTISDNYPPPLDAHVVASVMTMWNKLQPEYAANMWKE ALNKRLGTKGLDLPEIIVESEKRGMTFDKLLTVPEQDKWVYTDGQSASCVAYVLMMYK EAGLFDPIASSIEVTEFTIKDAYSLNFFENNMTRLPVWCNKDDSVKLPFCQIKGRYRM ELPGYNTMQPYPHMNERCPSLPPNYNRPRNC</aaseq>

Gene Sequence

<dnaseqindica>4445..4660#3990..4190#2894..2986#2409..2654#1219..1584#992..1132#65..421#agcgcggggcaacgcgaaactcgcggagggctcccagacctaaccggcggcggtggcggcggccatgggaggagcctacaacctcaagctcctcgccgccctctccgcgctcgtcctcctcctcgccgcctcgcgccccttcctcccggggctcctggaggcggccctccgcgcccccgtcctcccgcgcgacctcctccctctcctgccctggccggtggcccagccgctgctccgccgcctcgcgctgcgcggcgccgccgacctcctcccgtccttcgtcggcgtcgcgcgggagccaggtgatggcggcgcccgcgccgccgagtggaagggcgcctgcttctacgataaccgggcgtggatggagttccacaacgggactgatgggggccttggaggtggtacgctccatctcgaggtgagtgccggtcccaagccccgcgtcccagtgttggctctgttactctgagccggaggcggtagaaccattcttcctccccaagggagggaggcaattggggatttgtggcttgtttgttgcagtctgctagtttcaaccctggacttgatcgtaattttgagattatcacctcgattgcgttcagttcagtgaaacatttaaatttagtcatgtagcttagtgtagatcgatcggtgccagagttgtttgtacagcgtactagatggtactagtagatggttcattcaaatatgttcgtttccctatttaggcatatcacaattcacaaaacttggctcatgcctaatcttagttagatcaatatgtggcatctaactggacatgcccactccagtatggtttctgctgtcttgcatgtggtttgtgattggattgaagtcagtaaccttttttcagagctttgtgatttcttaatacaagttaattgctttctgaaggttctcatttctctacacatgaatattcttcttatttcactattgatcctgacactgttccttgttgcagacaaacaaagctcatagctggacttgcatagacctttatgtgtttgcaacaccatatcgtgttacatgggattactactttgtaggtcgtgagcatacccttgatttcaaagaatgggaaagcgaggctgaatatgaatatgtaagtccccgctgcagctgcttttgtttgtaatcagcatttctgatcattgatacacatatgcatgatcttttaccttaacataggtaaaacgcaaaggagtatccatattcctgatgccatctggaacaattggaacacttagagcactttgggatgttttccccctgtttacaaatactcaatggggtgagaattcaaatcttgcatttctaaagaagcatatgggtgcaaccttcgaggaacgtccgaaaccttgggtgtcagaattaaatgttgacgatatccactctggagattttttggttttatcaaaaattcgtgggcgctggggtggttttgaaaccctagagaagtgggttactggagcttatgctggccataccgcagtttgcctcagggattctgaaggaaagctttgggttggggaatctggtcatgagaatgaacaggtagtggtcattaactgtgtaattttttttactcatttgaatatgacagattgactgcatgagactgtgaatatagaagaatggaagaaaagaaaagttccagcatcttaactatttttcgcaggatgcatgatagaccacttttggatagtaatagtcttatgtaattttggtctgcggttggataggagtaattgtgctctcgtgctttcattgttaatacctgtggctttgtacaatgataatttctttaacccaataatgattctttcaaatgtaacatggatattttagagtgaattacagcttgggctagcttttatcgacaaagtttcaatttgggccacccttcaccctttgttgcaatttagaccaccagtctcatatcaagcgcatcaatagccttaagcacatcggcacctgcatgccggtaatctcccccacttacacacgggccacatctttgccagaggagacactagattttgctagaaatgagagctggggtggttcatagtgcaaaaagggcaagattacccggtctgaagtgaaaagattgatggggggcgatcaaagtgaaactttggtaataaatggtggcccaaactgcaattcactcaatgttttatattcttgctctaacagaatgtattaacatcaaccattgaagatgaaacatgggacaccactgatatgtcagatgttgttctatacttctgtctggtttactagttatataccgtaggaaagctaatgtgatgtttcccttggcgtgaggcgtatttatttcagcaacagtaagctaacatgcattaatttttcagggagaagatattattgctatcttgccatgggaagaatggtgggactttgaagtaaaaaaggatgattccaatcctcagattgcattactacctttgcatccagatttgcgtgcaaaatttaatgagacagcagcttgggaatatgcaaaaagcatggatggaaaaccttatgggtaccacaatatgatttttagttggattgataccataagcgacaactatccaccgccattagatgctcatgtggtatgatcaatatcactttttgccaacagcattttgctaacgcttatattattaagtgtgctatatcttatcgccatatattttcataggctggttgcttagagttatagattattatatgctgcatacctagtggattaattttaataccagatatagcaaggattgcttgcaaggttgagctatgcatttgagatttatttgctgattgtagtaacaaaatcttacgattggcctaggttgcctctgtgatgactatgtggaacaaacttcaaccagagtatgctgccaacatgtggaaagaagcccttaacaaacggcttggaactaaggtttgtttcaattggcgcttgttatttgtttgattgtatttatttttcatggttcatcagcagctcagtgctctctgaagagtctttgggggttatattacctttcctcttgttctgttagttcaaatcaaacagttgcttcatcatgtttgggaatgaatgctggcataccgattagagtgagcagccagttgggacactttgaagctacagtaatctggatctgtagttcttttatctgatgctgtggaggaaatgcatggttttgtttgctactgctgctttctgagacataggctagagggggaagtatccggtgcaactatgcaactctcatcctacaccgttggatcaagaaatggacgtccaagattcgtccatgtcacctgagttaaaatttaactcacagattcactcatgagttaaaatttactgggagttaaattttaactcatgctgacgtggacgaatctcggacgtccatttctcgatccaacggtgtaggatgagagttgcatagttgcaccgaattaggtgattgcaccggatacttccccgtaggcagggggagagagcccagtccagctgtgtgggctctgtaatagaactgtactaaacgctcaagaaggaatgcagattcctaaaagtctataactaaatctgaagatttccttaagtggttccttcttctaaaactaccctcaattatttttgataagacgtagtctgcatgagaatttctcatttactcaagcgtcccctgggtatatataagggttatgacacaccaagggatcctattttatgatacggggattggcctgcaacagttgattagttagtaattctcttagttcttttgtcgcatatccaatttctaacagtggaaggtgctccatgctatgagtttctatatacacagaaaatcattgctttatagctccgttgtgctcaatgctatgagtttttctggatagacttataatggagctatcttcttcagggtcttgatctacctgaaatcatagtggaatcagagaagcgtgggatgacatttgacaaattgctaacagttcctgagcaagataagtgggtctatactgatggccagtctgcttcttgtgtggcttacgtccttatgatgtacaaggaggctggactctttgacccaattgccagctctatagaagttactgaattcaccgtaagtactcttgatttcttgtgtggtttatgcttaaattccggcttccatgagatctagggtaattcagacatcaccgatggaactatatcatatgctcagtaattgactcatagtggaaggctagtctaccagttggcatattgccattctgcactaccaaatgatttgaattatgaatatttcctgatcattattaattgcccgcatccaacttctggtaaaaaaatatgttctccttaaattccatgcagataaaagatgcttacagcctcaacttttttgagaacaatatgacacggcttcccgtgtggtgcaacaaagatgacagtgtcaagctccccttctgccaaataaagggcaggtatcgaatggagttgcctggatacaacaccatgcagccgtaccctcacatgaatgaaaggtgtccttctctgcctccgaattataacagaccgcgaaattgctgatctgttacacattattacgccttgcattttgatatatgctggcttttagtctgtactttagctgtacatatcactgtagtctgtaggtatgcaattgttttctttgttgttactacgaagcaacttccgcaaataaggaagattatgattgcgtgaatgtacagtaaatctctacccttgatgctacaggtgttacactgctgtagggttcacataactttcgtcatatagtaattgacaaatacatgt</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0793500, RefSeq:Os01g0793500