Os01g0799000

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0799000| Description = NB-ARC domain containing protein| Version = NM_001051061.2 GI:297597783 GeneID:4327629| Length = 4516 bp| Definitio...")
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Gene Name

Os01g0799000

Description

NB-ARC domain containing protein

Version

NM_001051061.2 GI:297597783 GeneID:4327629

Length

4516 bp

Definition

Oryza sativa Japonica Group Os01g0799000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35572464..35576979

Sequence Coding Region

35572700..35574583

Expression

GEO Profiles:Os01g0799000

Genome Context

<gbrowseImage1> name=NC_008394:35572464..35576979 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35572464..35576979 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgtcacaggaacgagcactggacgaagttgtgtccccctttctaatgcaattatcaaaagcaagacttctttttctaaaactagatgaggacagttcatttttagagattaaacatctgtttcaaaatattgagaaagaagcttacgaagtggagaatatactacagagggtatcaagatgggaaaatgagataatcgatgactttggagggatagctcggtacttggatgacattgtagaagaagaaagtcacctgaattcaatatgtttgaagcttcaaattgtcaatgctgaaatgtccaacttaaaagatcgcatgaaacttcctcttcatgttcctgtgatcaagccatcagttcctccacttttaccagcatcttcgccagctaaattgttgccagcaaatgtttcagaggaatggagaaggctggagatcgaaaggaaaatccttgaaaactccaccatgtctaccttgcagctcagttatgataatcttgatctgcagctcaaactgtgcctattgtgcttctctatcttcccagaaaattctatcatcagcaagagggccatgatccattggtggataggtgagggcttagtagcagccacaagaaatcaaactgcggaagatgttgggaaggattgctttgacaagcttattgctagggatatgattgaagctgtgcacgtgaaacgcagttgtagcgtcagtgaatgtaagttgcacccttggattcgccgtatgttgattactgttgcaagaaaagcacaattttttgaatttgattcggaaggcaatgcaacatgggacttttcaggaactcaccgtgcttgtctagttgaagaatataagcaagaaatagaaatatcaccggtcaaaaaccaacccaatacagacggcctgctcacaatatttaatgtgaatgagcgatacctccagtttgacaagagttggttcttggatttgaggaagattgcggtgctccaactaggtcgatggcataacttgtatcgacaccatatcgaggttgacagtactgaatttctggaaggactgcagttgtccaaacaaataaaatatctctgcctacggggtatctccagaataactgcgcttcctgcttctattggtgaactctcaaatctcatgatcctggatcttcatgcttgtcataatcttgagaggctgactgagagcatcacctctcttcagatgctcacccaccttgatgtgtcagaatgctacctgctagagggcatgccaagggggattggtttgcttacagaactccaagtgctgaaagggtttgttattggtggttccacaagcaattataattgtcgagtggcggagttggtcagattggagaaactgaacaaactgagcgtatatattggaagtaaagttgcagtgacaggagatgaactgaatgaacttgagaacatcaaaggccttcgttcactgactattacatgggctgtatcagtgctgtcgaaaggaaaggaccaacaagcttctgtggcaacggcaatgttaacttcattatcccttcctccaaatcttaaaaagctagaccttcgttgcttccctggaaagaagataccaagctggttgagtccgagtaagctactgggactgaagaaactgtattttacaggcggaatgctaaatacttttggagatgggagcacgtcagagatgtggaaagttgagatattgcgcctgaaattcttagatgacttagaggtggaatggacccaattgcatgaggcattcccaaacctgaccttcctggaggtcttcaggtgtagcaaattagaatctttcccctgtgacaaggatggagtgtggatgaactgtgataagcaggaagtcagataa</cdnaseq>

Protein Sequence

<aaseq>MSQERALDEVVSPFLMQLSKARLLFLKLDEDSSFLEIKHLFQNI EKEAYEVENILQRVSRWENEIIDDFGGIARYLDDIVEEESHLNSICLKLQIVNAEMSN LKDRMKLPLHVPVIKPSVPPLLPASSPAKLLPANVSEEWRRLEIERKILENSTMSTLQ LSYDNLDLQLKLCLLCFSIFPENSIISKRAMIHWWIGEGLVAATRNQTAEDVGKDCFD KLIARDMIEAVHVKRSCSVSECKLHPWIRRMLITVARKAQFFEFDSEGNATWDFSGTH RACLVEEYKQEIEISPVKNQPNTDGLLTIFNVNERYLQFDKSWFLDLRKIAVLQLGRW HNLYRHHIEVDSTEFLEGLQLSKQIKYLCLRGISRITALPASIGELSNLMILDLHACH NLERLTESITSLQMLTHLDVSECYLLEGMPRGIGLLTELQVLKGFVIGGSTSNYNCRV AELVRLEKLNKLSVYIGSKVAVTGDELNELENIKGLRSLTITWAVSVLSKGKDQQASV ATAMLTSLSLPPNLKKLDLRCFPGKKIPSWLSPSKLLGLKKLYFTGGMLNTFGDGSTS EMWKVEILRLKFLDDLEVEWTQLHEAFPNLTFLEVFRCSKLESFPCDKDGVWMNCDKQ EVR</aaseq>

Gene Sequence

<dnaseqindica>2397..4280#ggtcgtcttctctagttttttcatggaatatattccataggagaacattgaccacttgggggtcgttgcgtcgtctccactggacctgccaatgtctttgttgtcgtcttcgtctcctgtgtcttcctaaagggacgaaggatcaaggagagataacagtgcagaagtgggaattcactacaagaaaaagcagtgacagagtacatatctttcacccctcacgtcggtcggggactcgggtcgacctagatgatgagaatctagataggggattcaagaggagcaaaccctcggtctcaacgattacgagggtaaaaacctcgctccgctgccgcgccgcggtcgaacgtggccgcgcctctcgtaggtcgaggggcgcgcagacgccggtcggtgccgccgtcgaactgtggccgccccttcaggtcggttgacccagagctgctgccggtgccccgccggccgaactcgcgccgccgccgccgccgcggctgtcgccctcctggctaacgtcgattaagctcgtgtccgccactctctgccccgcgccgacgccggtgagggtggtagccgggtaggtgagtacagtgttttatactaattgtacagtattcactccgtattctaacgtataacgctgttcatttgtcttattaaaaactttatgtatttattatttattttattatgacttgatttatcatcaaatattatttaaacgtgacataaatatttttgtatttacataaaaattttaaataagacgaatggtcaaacatagttcaaaaagtcaacggtgtcatacattaaaatacggagggagtattattataaaattttctgtgttataaaagccctttcttgtatattcatgttttatttatttatcaattttataatcgcaattgtatcatatatgttttgtcttccgctgtttttcatcatttgttcaaaacagaacctcataaagcctcgcagttgatagcttcagccggcaactattggcagtgctggtctgctgactcttaccagcaaaggaacgaaccctcgtttgagtgagtgtggtttatcgtttctcccctctggttgggtttacccctttataacagtagtactgtaaatgagtccaccctctgcaattttctgtttgatgaaaacaagttgaagccgaattaaagaacagagatatggctgagaagcatgttactaccgagttgaaaaaatatcaacttatatcaagattttaagtcaatatagcttcatttgttttggtcaggcatatcaagattcaagagctgtctcttttacatcaaactgtaaagtccaaagtgatactgataggtctgttaggtttcgtttggtttcataagaagatggtggaagtgtgctccagacttttattaagcataatctttccagcctattgaatgctaattaaagggtaagggtgctccagattcttaggatatctgatatcttgccagtatgatagtctcttggtgctcgtttgtctgggaaactattttgatccctcaatgggatgttccctcgttatttgtatgtcacttaaatggttataaaaaaaattgaaaaaaattaagtagatgtattaacatgtgatatatcactacacaaacatgcaagttcaaattcaacttcgacaactcgcaacgaaaaaaacaaatctgactatgaatatatgtaaactagctgtaatttaattttttttattgcgagatgtagaagttgaatttgaacttgcatgtttgtggagtgatatatcacgtgttaatacatcgtttcaaattttttcacccgtttgagtgacgtgcaaacaacgaggggacatccccttgaggatcaaaatccactccccatttgtctcactggtggtctgcttaggtgtgtggctgcttttgtaacttgtctctgaaaacgttgcacagtgaagtttcgctgctaatctcactgctttctcttgaatctgaagaagaagaagaatagcatacataagaattttttaaattttgataaacagaaataattaatgaatacaatcttagtcgaatcagctagaattttgcttagcagttctttcatttctgtagccaacctagcctcattgtaatatgatttctgaggcctgagttagcttcaatacctcttttagaggaactagccgaatttcccacccaatcgggcagacagtctaccaaaactataattgtgctacaaaaatctaatctttatttctaaaaatacaattgtatttctcatagagttgtaagacttgctttcatgtttagagatattattgaatccaagcacatccaagtaccttcctctttttcacattgtcagctctgtttcaggtgattgcagttgcagaaatcacgatgtcacaggaacgagcactggacgaagttgtgtccccctttctaatgcaattatcaaaagcaagacttctttttctaaaactagatgaggacagttcatttttagagattaaacatctgtttcaaaatattgagaaagaagcttacgaagtggagaatatactacagagggtatcaagatgggaaaatgagataatcgatgactttggagggatagctcggtacttggatgacattgtagaagaagaaagtcacctgaattcaatatgtttgaagcttcaaattgtcaatgctgaaatgtccaacttaaaagatcgcatgaaacttcctcttcatgttcctgtgatcaagccatcagttcctccacttttaccagcatcttcgccagctaaattgttgccagcaaatgtttcagaggaatggagaaggctggagatcgaaaggaaaatccttgaaaactccaccatgtctaccttgcagctcagttatgataatcttgatctgcagctcaaactgtgcctattgtgcttctctatcttcccagaaaattctatcatcagcaagagggccatgatccattggtggataggtgagggcttagtagcagccacaagaaatcaaactgcggaagatgttgggaaggattgctttgacaagcttattgctagggatatgattgaagctgtgcacgtgaaacgcagttgtagcgtcagtgaatgtaagttgcacccttggattcgccgtatgttgattactgttgcaagaaaagcacaattttttgaatttgattcggaaggcaatgcaacatgggacttttcaggaactcaccgtgcttgtctagttgaagaatataagcaagaaatagaaatatcaccggtcaaaaaccaacccaatacagacggcctgctcacaatatttaatgtgaatgagcgatacctccagtttgacaagagttggttcttggatttgaggaagattgcggtgctccaactaggtcgatggcataacttgtatcgacaccatatcgaggttgacagtactgaatttctggaaggactgcagttgtccaaacaaataaaatatctctgcctacggggtatctccagaataactgcgcttcctgcttctattggtgaactctcaaatctcatgatcctggatcttcatgcttgtcataatcttgagaggctgactgagagcatcacctctcttcagatgctcacccaccttgatgtgtcagaatgctacctgctagagggcatgccaagggggattggtttgcttacagaactccaagtgctgaaagggtttgttattggtggttccacaagcaattataattgtcgagtggcggagttggtcagattggagaaactgaacaaactgagcgtatatattggaagtaaagttgcagtgacaggagatgaactgaatgaacttgagaacatcaaaggccttcgttcactgactattacatgggctgtatcagtgctgtcgaaaggaaaggaccaacaagcttctgtggcaacggcaatgttaacttcattatcccttcctccaaatcttaaaaagctagaccttcgttgcttccctggaaagaagataccaagctggttgagtccgagtaagctactgggactgaagaaactgtattttacaggcggaatgctaaatacttttggagatgggagcacgtcagagatgtggaaagttgagatattgcgcctgaaattcttagatgacttagaggtggaatggacccaattgcatgaggcattcccaaacctgaccttcctggaggtcttcaggtgtagcaaattagaatctttcccctgtgacaaggatggagtgtggatgaactgtgataagcaggaagtcagataagtagaatgcaatgttgaatcaagtgagtttcctttcgctgatctttcttctcggtgtcactcaatagatttcatgaaacacaaaggagccgaagcaattctttagcttaactacagaatattatggctgtatttgagcactgaagagcaattccttcattttgaatattcagttctgaaaatatatcatttttcgaatattacagtgaaccagcaactatcctactgtttcattgc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0799000, RefSeq:Os01g0799000