Os01g0801600

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0801600| Description = Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment)| Version = NM_001051076.1 GI:115440522 GeneID:4...")
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Gene Name

Os01g0801600

Description

Similar to Glycerol-3-phosphate dehydrogenase-like protein (Fragment)

Version

NM_001051076.1 GI:115440522 GeneID:4327964

Length

3820 bp

Definition

Oryza sativa Japonica Group Os01g0801600, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35708033..35711852

Sequence Coding Region

35708269..35708410,35709090..35709229,35709336..35709583,35709943..35710164,35710776..35711427

Expression

GEO Profiles:Os01g0801600

Genome Context

<gbrowseImage1> name=NC_008394:35708033..35711852 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35708033..35711852 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgggcggggcggaggacgcgccgcgcgcggcggcggcgaacgggcacgggaatggggccaccgtggaggagaagctggacgagctgcggcgcctgctgggcaaggccgacggcgacccgctccggatcgtcggcgtcggcgccggggcctgggggagcgtcttctgcgcgctgatgcaggacgcgtacggacacctccgcgacaaggtgcaggtccgcatctggcgccgcccgggccgcgccgtcgaccgcgccaccgccgagcacctcttcgaggtcatcaacgcccgggaggacgtcctccgccgcctgatccgccgctgcgcctacctcaagtacgtcgagggccgcctcggcgaccgcaccctctacgccgacgagatactcagggacggcttctgcctcaacatgatcgacacgccgctctgcccgctcaaggtcgtcaccaacctccaggaggccgtctgggacgccgacattgtcatcaacgggctgccgtccacggacaccagggaagtcttcggggagattgggaggtactggaaggagaggattactgcccccatcatcctctctctggccaaagggatagaggcctccctggatcccctgccacggatcataactcccacacagatgattagcaatgcaacgggggttccattggaaaacattctttatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgtatatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcattttattgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtgtatgccattggtgccggtatggtggcagctctaacaaatgagagtgcaaccagcaaatccgtttactttgctctttgcacatctgaaatgatttacataacccaccttttggaagaagagcctgaaaaacttgctgggccattattggctgacacttatgtcacattgctgaagggtcgtaatgcatggtatgggcagaaactagctaaaggtgaactgacactagagatgggtgacagcataaaaggcaaaggaaccattcagggtgtctctgcagtcaatgcattttatgaactcctgagtcaggatagcttaagcgtaatgcatcctgaagccaacagatctgttgcaccggttgagatgtgcccaatcctgaaggcactgtacaaaattttgatcaagagggaacttcctcctgattcgatccttcaggccataagagatgaaacaatgtatgatccacgtgaaagaattgagatggcgcagggccattcactttaccggccatctcttcttggtcaacctaaaggagatgccaaagcttag</cdnaseq>

Protein Sequence

<aaseq>MGGAEDAPRAAAANGHGNGATVEEKLDELRRLLGKADGDPLRIV GVGAGAWGSVFCALMQDAYGHLRDKVQVRIWRRPGRAVDRATAEHLFEVINAREDVLR RLIRRCAYLKYVEGRLGDRTLYADEILRDGFCLNMIDTPLCPLKVVTNLQEAVWDADI VINGLPSTDTREVFGEIGRYWKERITAPIILSLAKGIEASLDPLPRIITPTQMISNAT GVPLENILYLGGPNIASEIYNKEYANARICGADKWRKPLAKFLRQPHFIVWDNSDLIT HEVMGGLKNVYAIGAGMVAALTNESATSKSVYFALCTSEMIYITHLLEEEPEKLAGPL LADTYVTLLKGRNAWYGQKLAKGELTLEMGDSIKGKGTIQGVSAVNAFYELLSQDSLS VMHPEANRSVAPVEMCPILKALYKILIKRELPPDSILQAIRDETMYDPRERIEMAQGH SLYRPSLLGQPKGDAKA</aaseq>

Gene Sequence

<dnaseqindica>3443..3584#2624..2763#2270..2517#1689..1910#426..1077#attccacccgaccctgttcgctttcgcttcgcctcgttcgcgggtcgcgacgcgagcagcggaggcgcaacaggcggcaaacgtcccggggcggtgccggcagccaagccaagccaagccgcctcggtctctccggccgacagtgattcggcggccaaacctaccagcagccaccaaaaattggcggacgactcctcagatcgcgtcacatgctggggtgggcaggctggtcttagtagatagagaagggaaaaaaaatagtgcgtcgtttttactatacttttctgtgggatttggttcgttcgctcgccgatccccgtaattaagtagtcggttatgtagcgtgtgccgttgggctctccggtgcctgctcgattttgcttgcagcgacgacaagggaaggcggagaggtggaggagggagcaatgggcggggcggaggacgcgccgcgcgcggcggcggcgaacgggcacgggaatggggccaccgtggaggagaagctggacgagctgcggcgcctgctgggcaaggccgacggcgacccgctccggatcgtcggcgtcggcgccggggcctgggggagcgtcttctgcgcgctgatgcaggacgcgtacggacacctccgcgacaaggtgcaggtccgcatctggcgccgcccgggccgcgccgtcgaccgcgccaccgccgagcacctcttcgaggtcatcaacgcccgggaggacgtcctccgccgcctgatccgccgctgcgcctacctcaagtacgtcgagggccgcctcggcgaccgcaccctctacgccgacgagatactcagggacggcttctgcctcaacatgatcgacacgccgctctgcccgctcaaggtcgtcaccaacctccaggaggccgtctgggacgccgacattgtcatcaacgggctgccgtccacggacaccagggaagtcttcggggagattgggaggtactggaaggagaggattactgcccccatcatcctctctctggccaaagggatagaggcctccctggatcccctgccacggatcataactcccacacagatgattagcaatgcaagtgagattcctttccttttctttacacaatcttaccatcatgtgcactctttgcttgaattaacttgttctttgttctttgtttgtgcttatccgtaactaggatattctttaatctggtattgacaaatgcagtttatctttgctttagactacattagaaatttgtaactttgtatgatttgaggatgaatagtttgtttacttcagctctatgccctaacataatttacacaaaagtaagtctatgttgaacatacaaaggcacaagtctgaaaatgacaacgctggcaaaaaaagaactggatgggacaaacattgcctttattcatgtcctctgttgttcaatagtcctttagctgtttagctgctagatatgttacatgaattggtataactccagtttctgtctttccacataaataaaatgaattatttagattctcccttttattttaaactcaattcaggttaatatgtttaaacctgatcatttgtggtgtgtgttactgttaacggccgagtgttcatgcttggttttacttcttaactgttttgaattatatccttccaatttatttctgcaatttatatttgttttgttttctgcagcgggggttccattggaaaacattctttatcttggaggccctaacattgcttcagaaatttacaataaagaatatgcaaatgctcgtatatgtggagctgacaaatggagaaaacctcttgctaaatttttgaggcagcctcattttattgtatgggataatagtgatctcattacacatgaagtcatgggaggtttgaaaaatgtgtatgccattggtgccggtaatttctatttcctctcttgattgtttttgctatcttctgtaatcacggtagagcatatactgttgtgatatttagcatggggtatgttggaatgcactggtcagctttagttgatgttttgcgtactctgccttgttttatatttttcagaatgcactgttaccatcaagatatatacaatgttttctccaggaagaaatataccataaatacaactatagaaatatgtgcggtatattgtggcttcatctatgttgctatgctttacgtcgcgttttaatcttgtcgtggtcatctgcctttttttttcttggtttatgcttctgttaattttctgaaattttgttatcctgcaggtatggtggcagctctaacaaatgagagtgcaaccagcaaatccgtttactttgctctttgcacatctgaaatgatttacataacccaccttttggaagaagagcctgaaaaacttgctgggccattattggctgacacttatgtcacattgctgaagggtcgtaatgcatggtatgggcagaaactagctaaaggtgaactgacactagagatgggtgacagcataaaaggcaaaggaaccattcaggtttgcccttccgtcttggtttctgaaatatcaataactgaggaaatgatgcaccttatgatggtctgatggccatgtacttaattttgttatcattttattccagggtgtctctgcagtcaatgcattttatgaactcctgagtcaggatagcttaagcgtaatgcatcctgaagccaacagatctgttgcaccggttgagatgtgcccaatcctgaaggcactgtacaaaattttgatcaagaggttagtatgttctttttggatgttatatcaatatcccatacttttttcaacatatttaaacccacgtgaccgagcaaagttccctttagtccttattgaattcgtactctagtaattataatcacagcagacatttgaaagtctagttctcttggtcagttccagctgttatcgtcattttctcaaggcactaaatcagtggcagctaaaatgtaggattgtgcaagggtgtagctatatttatggcgccatatttttcataaaaaaatagtcgacatgtatttacattgtaagttcctaaagtacatatgtaattttagtatatttacaatgtaagtctcaaaattacatatgtaagtactaaaattacatatgtaaattcgaaaattacatactaattacatatgtaggtggggtgtaaatgaggtgtaactactgtgtaagtggctgaaaaaaatcgactgtagcatatggcgccatatttctagcaactccgttgtgcaaatagaggaggccagcagtgccaatattttgagatttgctcaaatttgaataaattccatattttttttcaagcttttggggggctccttttctccaccctcatactactagctgacagtgcagtcgtagcgtatttgtgccacagcctactcaatttgttcatttgtatttacagggaacttcctcctgattcgatccttcaggccataagagatgaaacaatgtatgatccacgtgaaagaattgagatggcgcagggccattcactttaccggccatctcttcttggtcaacctaaaggagatgccaaagcttaggcagttcttccttttttttttggtgctagatatcctgtaagctctgtgtgctattatgcttgctgctgctgctgttgttgtaacactagtgagttccagcaagggaccaagatctcagttgattgcttcaagacttgttgagcttgttatgtagtttgatttgttaaacgcctgaaatgtgtacatagacgttgttttgtgtgatccaataataaaatatgcaaaaggtaatgttc</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0801600, RefSeq:Os01g0801600