Os01g0802000

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Revision as of 05:05, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0802000| Description = Zinc finger, RING-type domain containing protein| Version = NM_001051078.1 GI:115440526 GeneID:4327967| Length = 206...")
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Gene Name

Os01g0802000

Description

Zinc finger, RING-type domain containing protein

Version

NM_001051078.1 GI:115440526 GeneID:4327967

Length

2060 bp

Definition

Oryza sativa Japonica Group Os01g0802000, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:35724590..35726649

Sequence Coding Region

35725401..35726390

Expression

GEO Profiles:Os01g0802000

Genome Context

<gbrowseImage1> name=NC_008394:35724590..35726649 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:35724590..35726649 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atgccaaatagagccacgcattggtgttatgcctgccgacgtccaattcgtgttagtggacaagatattacatgccccaactgcaatgatggttttatacaagaaatcagtgagataggtggttcattgaacacttatggtatctttgacccgagctttgatgagcgtcgagatagaagttttggaatggtggaggctatgtctgaccttatgcgacaacggatggcagaaatgggcagaaatcgtgtgttggatttccatggtacgagaggggcaagttcccatcaaggaaggcagccaactgttagaccaatgctcatatttggcagcaatgcacctgatcgtgtaagcagcagtagtgaagaagcagatatactcctcaggcaaggccgcagaattggcgcggaccgtccaaatttcagtcgtttcctagtcggtcccagtcttgaagctctattcgaacagctgctcctgcataataaccgtcaaggaccaccaccagctccacagtctgcaattgactccatgcctgtggtaaagataaacctcaggcaccttagagatgatcctcactgtccagtttgcacagacaaatttgaggttggaacagaggcacgggagatgccatgcaagcatctgtaccatgctgaatgcatcattccctggctggttcagcacaattcttgtccagtttgccgccatccactgccgtcatcttcccaccgttcaggcagcacccgttcatcgtcaacccactctaacgaagctattagccatggggttgccagatctgatgctgatcctgttcctgttgcaagaagcgacgacagcagaaaccatgaaatgcacggttctttctcgtttctctggccatttgattcacctactcctgattccagttcctacacgcacgaaggaggtgttggtgagcctacagttcatgacgatgctggccagatgacctattctgagtggcattacgactactga</cdnaseq>

Protein Sequence

<aaseq>MPNRATHWCYACRRPIRVSGQDITCPNCNDGFIQEISEIGGSLN TYGIFDPSFDERRDRSFGMVEAMSDLMRQRMAEMGRNRVLDFHGTRGASSHQGRQPTV RPMLIFGSNAPDRVSSSSEEADILLRQGRRIGADRPNFSRFLVGPSLEALFEQLLLHN NRQGPPPAPQSAIDSMPVVKINLRHLRDDPHCPVCTDKFEVGTEAREMPCKHLYHAEC IIPWLVQHNSCPVCRHPLPSSSHRSGSTRSSSTHSNEAISHGVARSDADPVPVARSDD SRNHEMHGSFSFLWPFDSPTPDSSSYTHEGGVGEPTVHDDAGQMTYSEWHYDY</aaseq>

Gene Sequence

<dnaseqindica>812..1801#gcgattgcggcttcgtcgctcgtcctgccgcttccgccgcatcctggtgagcacatcctccgccaccgctgcctgctccgatccccattcatcgcgcgagcgagtacggcttcgtcgctcgtcctgccgcttccgccgcatcctggtgagcacatcctccgccaccgccgcctgctccgatccccatccatcgcgcgagcgagcgagggtcgccgtcgctcatcctgctgcttccgccgcatcggtacatcctctttcccatctctctctctctacccacgcactttttttctcgaatttgcgttaaccctatcttctgttctagaaattagccttaaccttaataatagtaacaggttgatgattcctaacaagtgtttggggttcaactgaacccccatgtcccatgttagatccgccagtgagccatgttgttagtgacagtatgttttagatagtggggtaagaattcactattcagtgatcaatacctcactccaactctcacatacgtttgattacatagttccgtagagtatactactcgtagtactatgtaaatcctagtaatgggttctccctacagagccctgcctggggtttcattcccaaaattagccagtcgtagtgatcaaatctgtcttataaacatcaattgggtgtaactgttccctcatcctccaagtaagtgtgatctgtagcaaattgtattgtagccttggagtacatgtttcaatattttttttgcttggtactttctttgtagaaaatattttctaatgctgattgcttaatttttcacacagacaagatgccaaatagagccacgcattggtgttatgcctgccgacgtccaattcgtgttagtggacaagatattacatgccccaactgcaatgatggttttatacaagaaatcagtgagataggtggttcattgaacacttatggtatctttgacccgagctttgatgagcgtcgagatagaagttttggaatggtggaggctatgtctgaccttatgcgacaacggatggcagaaatgggcagaaatcgtgtgttggatttccatggtacgagaggggcaagttcccatcaaggaaggcagccaactgttagaccaatgctcatatttggcagcaatgcacctgatcgtgtaagcagcagtagtgaagaagcagatatactcctcaggcaaggccgcagaattggcgcggaccgtccaaatttcagtcgtttcctagtcggtcccagtcttgaagctctattcgaacagctgctcctgcataataaccgtcaaggaccaccaccagctccacagtctgcaattgactccatgcctgtggtaaagataaacctcaggcaccttagagatgatcctcactgtccagtttgcacagacaaatttgaggttggaacagaggcacgggagatgccatgcaagcatctgtaccatgctgaatgcatcattccctggctggttcagcacaattcttgtccagtttgccgccatccactgccgtcatcttcccaccgttcaggcagcacccgttcatcgtcaacccactctaacgaagctattagccatggggttgccagatctgatgctgatcctgttcctgttgcaagaagcgacgacagcagaaaccatgaaatgcacggttctttctcgtttctctggccatttgattcacctactcctgattccagttcctacacgcacgaaggaggtgttggtgagcctacagttcatgacgatgctggccagatgacctattctgagtggcattacgactactgaacttcctgcagcaagaccccccaacatatcagtgtccactcctcttggcttcaacctcttaaagaggaggtggataatttatgggtgtcgtgttgggtgtgtgaggctttcgcctagaacaaaccttgtgttgcatgtgccgttctatcccatatgctggggctgtgtataactgtacatcaactattgagcaatgagctatatgctgtactgccagggatgctatggtaaactacaagtgaatatgtgatatgtctga</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0802000, RefSeq:Os01g0802000