Os01g0810200

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Revision as of 05:06, 25 June 2012 by 127.0.0.1 (talk) (Created page with "{{JaponicaGene| GeneName = Os01g0810200| Description = Cupin, RmlC-type domain containing protein| Version = NM_001051117.1 GI:115440604 GeneID:4327350| Length = 3212 bp| ...")
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Gene Name

Os01g0810200

Description

Cupin, RmlC-type domain containing protein

Version

NM_001051117.1 GI:115440604 GeneID:4327350

Length

3212 bp

Definition

Oryza sativa Japonica Group Os01g0810200, complete gene.

Source

Oryza sativa Japonica Group

 ORGANISM  Oryza sativa Japonica Group
           Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta;
           Spermatophyta; Magnoliophyta; Liliopsida; Poales; Poaceae; BEP
           clade; Ehrhartoideae; Oryzeae; Oryza.
Chromosome

Chromosome 1

Location

Chromosome 1:36172966..36176177

Sequence Coding Region

36173068..36173419,36175092..36175216,36175289..36175492

Expression

GEO Profiles:Os01g0810200

Genome Context

<gbrowseImage1> name=NC_008394:36172966..36176177 source=RiceChromosome01 preset=GeneLocation </gbrowseImage1>

Gene Structure

<gbrowseImage2> name=NC_008394:36172966..36176177 source=RiceChromosome01 preset=GeneLocation </gbrowseImage2>

Coding Sequence

<cdnaseq>atggcgaacccgaggagagccatcgcgctgcaaatccacacgcagacgacgcccctcgccgccgcccccgccgccgcgccgtccccctcgctgccgtcgtcgctggtccacttcctgaagcggccggcgtcgttcccattcctgctctccctcttcgtgctcctcacctggatctcgctccgcttccaccacccgtccccttcggcttccgtcctcagggcccccgtcgtgcacgacccccaggccaacctcgtccgttaccccgccgcgctgtaccccacccccatcgccgccgacgggcgcgggtggctacttgaccccgtcgccgctgctcgagacgccggcttaccaggaggagcactggtttgtttatcactacacgtgggacagatccagccaggtggtttacgtggcaatcatcgccaccatacatgcaatgagacatttgtcatctggggtgcaaagacaaaattccggttagaaaatgctgatgtaaatgatagaggatatggggaagccatgattgccgctgatgaggtggccattgttgcaagcgcaagatcaactgcacatgccttgataaatatggatgtgcgaccaaccttcttcttgggatgtcaggacacgccaataaatcccaacagctcgaatactgactacaaggtctggaaagacatctga</cdnaseq>

Protein Sequence

<aaseq>MANPRRAIALQIHTQTTPLAAAPAAAPSPSLPSSLVHFLKRPAS FPFLLSLFVLLTWISLRFHHPSPSASVLRAPVVHDPQANLVRYPAALYPTPIAADGRG WLLDPVAAARDAGLPGGALVCLSLHVGQIQPGGLRGNHRHHTCNETFVIWGAKTKFRL ENADVNDRGYGEAMIAADEVAIVASARSTAHALINMDVRPTFFLGCQDTPINPNSSNT DYKVWKDI</aaseq>

Gene Sequence

<dnaseqindica>103..454#2127..2251#2324..2527#cgggcccgtctcgccaccaacagctcgccgcggcggcggccgagtccgggcagcgccaccaccaccagcagcaagcagcagcagctcgccgcccacccatccatggcgaacccgaggagagccatcgcgctgcaaatccacacgcagacgacgcccctcgccgccgcccccgccgccgcgccgtccccctcgctgccgtcgtcgctggtccacttcctgaagcggccggcgtcgttcccattcctgctctccctcttcgtgctcctcacctggatctcgctccgcttccaccacccgtccccttcggcttccgtcctcagggcccccgtcgtgcacgacccccaggccaacctcgtccgttaccccgccgcgctgtaccccacccccatcgccgccgacgggcgcgggtggctacttgaccccgtcgccgctgctcgagacgccggcttaccaggtgagttcatcctaggccctagggcctaggctgatgcatcctacctgtggcattttggtccactgtgcgttctatgtgtctgcgtgatgcaacagtgtgatattgctgtgctaaagaaaattgtgatggaatggaattgtggaaatattgagtggtgtagtcgaatgcttagaatcgaaagcatattaccatcgcgtcaaatcttgctgaatccagcctatgtggactgtggacgcacaattgtaatcgataccacaattccacgatcatgtagtttgtgtctgataaggatttgctgaagtaggaactgatgctaggaaacgactgaacagcacattagtattttctgcagctaaaacatgtttattgtcatgtggcaatgtgaacctttggagcagcactgacctttagttgctgcatcttactagatcaagtgtggttgctctccagagttcctgaccctatcctgctgtttggattagttttgtctatgcttcttttatgtcgcatgtacttgggtatgtttttttacctgaacatgtacttggttattcattgacatagtatttttgctgcataaaaataactaaggttatactgcaaatcaatagattgtagtgggttacttatttgacagtgaactaagaaacaacagaacaagggcttcattcacaaccatctcttcatttatccttgcaacttgcccagttggaaaaaggaagagaaatcgatcatttggagtatgtagcagcttacaaccaattcttttgagcttatcaacttagatttttatccatcactgacactttcgatcaagttccttataagtttcatttacctttagccagtgccattaacttattttatttgttagggtagaacttgatgattcttaacagaataccattgtcactgttaccgctgcattgagcttgggatctttctcaattgtaggattggtcgttggaatcaatatactgaatatctgtgttgcatcctttggcttaggctgcttagtcctataatatttgtttcaactgcaactttctcaacttgactgcagtattattactcactttacttcattctgcaaattcgatcaaatcatcttataacattttgagtatcttcattgatgttgtaaaagtgcagtaaaatgaggcatttaaactttttagatcttatgtgttaatttttgaaagtaaactgcaccccctcttctcctagagaaaacgtccactttcttcatatataagaaaaatccacataccattcacctgtaattgcaaaacttcaggcttttctttttgccatggttacaactttacaatggtgccaaagaaagacagccaagatgcgcatttgatatcctccataaaaccttagggaacctgtctttctaagggaagatgtagttgctgctccctaagatgtgcactaaatatttagttggacaggactatgtagaattcacagcttagggagcagcaactatatccccttgtacaaaataaatgtgtcatggactttgtatgaggatgacatggaagttttgagatgtttactaaaatcggttaaaatggcttatggagcagatatgtgagtgaaacataggtagttttttttttcttgaaattgcttggatggtcattgttatattaaattgtgacaggaggagcactggtttgtttatcactacacgtgggacagatccagccaggtggtttacgtggcaatcatcgccaccatacatgcaatgagacatttgtcatctggggtgcaaagacaaaattccgggtaatgatcttctgaaatttctaacaattgcacatttgaagtatttcctgacactttttccataattgacagttagaaaatgctgatgtaaatgatagaggatatggggaagccatgattgccgctgatgaggtggccattgttgcaagcgcaagatcaactgcacatgccttgataaatatggatgtgcgaccaaccttcttcttgggatgtcaggacacgccaataaatcccaacagctcgaatactgactacaaggtctggaaagacatctgatgatcacgttgcttctgtccttaatggtaagccatgagaaaccataatagcatgaagccttcagaaaccatcttgtttccattggcaatgatttcaaagcagatgtgtatatagttacggcttgtgacttatgaggggacttccagttacgaagctattcttttgtttgtcatgccaaatttcttctgtagtaggtgggttcatatatgttacttcatcagttcgtcttgcatatattctccagtactgtactcctttttctaatgactttccattttcaggttaacctttttcgtttggaggtgtaatgcattttcagggttattacttgatgatatgttcccctgttctttgaatgatgtgttgtcgataaattaattgttgatatgcaggtaaggtgtgacatgaactttttaatgatcacataccgcaagatatatctgattgcttaacgtgaattctcatatggtgaggtagtgtttggcacgcacatcagcgcatttcttgtggtgtagcatggatcactagtgtgctttcgcgtctgtctgacttgcagacatctgctttcttttggttttctatcagcgtcgtctatatttgctagtttgattcatgtccacagatttttatttttaatgacacgtgtggatgagtgtggatattcgtccacacagtattgaaaacg</dnaseqindica>

External Link(s)

NCBI Gene:Os01g0810200, RefSeq:Os01g0810200